RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 FBXL22Q6P050 247 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 OPN5Q6U736 354 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 SLC51BQ86UW2 128 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 OR51D1Q8NGF3 324 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 SPPL2BQ8TCT7 592 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 INIPQ9NRY2 104 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 PARVAQ9NVD7 372 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 RBM12B-AS1Q9P1G2 102 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 SMPXQ9UHP9 88 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 ZNF223Q9UK11 482 aaPredicted RBP4.43□□□□□ -1.7
BRCA1-224ENST00000497488 VPREB3Q9UKI3 123 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 PROCRQ9UNN8 238 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 ENPP4Q9Y6X5 453 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 RANBP2P49792 3224 aaKnown RBP4.43□□□□□ -1.7
BRCA1-224ENST00000497488 LTBP2Q14767 1821 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 FUOMA2VDF0 154 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 ZNF878C9JN71 531 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 C15orf65H3BRN8 121 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 PLIN3O60664 434 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 ARL6IP5O75915 188 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 CFC1BP0CG36 223 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 CFC1P0CG37 223 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 KCNE1P15382 129 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 CXCL2P19875 107 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 CXCL3P19876 107 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 PSMB1P20618 241 aaKnown RBP4.42□□□□□ -1.7
BRCA1-224ENST00000497488 GFERP55789 205 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 RAB25P57735 213 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 RAB5BP61020 215 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 CRADDP78560 199 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 C1DQ13901 141 aaKnown RBP4.42□□□□□ -1.7
BRCA1-224ENST00000497488 ZNF404Q494X3 552 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 ATP6AP1LQ52LC2 224 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 SPATA31B1PQ5VZV4 182 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 SLC36A1Q7Z2H8 476 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 TMEM86BQ8N661 226 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 YIPF5Q969M3 257 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 FAM104AQ969W3 186 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 NEURL3Q96EH8 262 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 RNF157Q96PX1 679 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 OR4K3Q96R72 315 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 PRSS27Q9BQR3 290 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 BATF3Q9NR55 127 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 LAMA3Q16787 3333 aa4.42□□□□□ -1.7
BRCA1-224ENST00000497488 TMEM131Q92545 1883 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 A0A087WUJ7 227 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 IGHV3-74A0A0B4J1X5 117 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 TEX50A0A1B0GTY4 177 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 LOC389332A0A1B0GUA5 103 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 PLAC8L1A1L4L8 177 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 MYBPHLA2RUH7 354 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 TRIM49D1C9J1S8 452 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 M0R1X1 148 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 HLA-DPB1P04440 258 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 REG1AP05451 166 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 CECR9P0C854 216 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 ZNF708P17019 499 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 SLC6A1P30531 599 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 HMGA2P52926 109 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 H2BFSP57053 126 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 IFITM2Q01629 132 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 ADIGQ0VDE8 80 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 PNOCQ13519 176 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 RSBN1Q5VWQ0 802 aaPredicted RBP4.41□□□□□ -1.7
BRCA1-224ENST00000497488 TMEM215Q68D42 235 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 LYPD2Q6UXB3 125 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 ACP7Q6ZNF0 438 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 ZNF497Q6ZNH5 498 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 NAA40Q86UY6 237 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 DRAM1Q8N682 238 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 KLHL30-AS1Q8NEE0 82 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 OR1L8Q8NGR8 309 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 MFSD8Q8NHS3 518 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 GHSRQ92847 366 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 TMBIM1Q969X1 311 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 MRPL48Q96GC5 212 aaKnown RBP4.41□□□□□ -1.7
BRCA1-224ENST00000497488 TIMM17AQ99595 171 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 MRPL20Q9BYC9 149 aaKnown RBP4.41□□□□□ -1.7
BRCA1-224ENST00000497488 PCBD2Q9H0N5 130 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 TXNIPQ9H3M7 391 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 TBX21Q9UL17 535 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 Q9Y3F1 56 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 INSIG2Q9Y5U4 225 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 CACNG2Q9Y698 323 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 WSB1Q9Y6I7 421 aa4.41□□□□□ -1.7
BRCA1-224ENST00000497488 BAZ2BQ9UIF8 2168 aaKnown RBP4.41□□□□□ -1.7
BRCA1-224ENST00000497488 MYH6P13533 1939 aa4.4□□□□□ -1.7
BRCA1-224ENST00000497488 LAMA2P24043 3122 aaKnown RBP4.4□□□□□ -1.7
BRCA1-224ENST00000497488 TRAV8-3A0A0A6YYJ7 113 aa4.4□□□□□ -1.71
BRCA1-224ENST00000497488 EDIL3O43854 480 aa4.4□□□□□ -1.71
BRCA1-224ENST00000497488 SUPT3HO75486 399 aa4.4□□□□□ -1.71
BRCA1-224ENST00000497488 GCM2O75603 506 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-224ENST00000497488 SERPINB7O75635 380 aa4.4□□□□□ -1.71
BRCA1-224ENST00000497488 GABARAPO95166 117 aa4.4□□□□□ -1.71
BRCA1-224ENST00000497488 IGLV2-23P01705 113 aa4.4□□□□□ -1.71
BRCA1-224ENST00000497488 HSPB1P04792 205 aaKnown RBP4.4□□□□□ -1.71
BRCA1-224ENST00000497488 ZNF286BP0CG31 522 aa4.4□□□□□ -1.71
BRCA1-224ENST00000497488 CD36P16671 472 aa4.4□□□□□ -1.71
BRCA1-224ENST00000497488 CRYBA4P53673 196 aa4.4□□□□□ -1.71
BRCA1-224ENST00000497488 RIPPLY3P57055 190 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms