RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 GLAP06280 429 aa11.25□□□□□ -0.61
VTI1A-209ENST00000496445 CD1BP29016 333 aa11.25□□□□□ -0.61
VTI1A-209ENST00000496445 GPR12P47775 334 aa11.25□□□□□ -0.61
VTI1A-209ENST00000496445 GABPB1Q06547 395 aaPredicted RBP11.25□□□□□ -0.61
VTI1A-209ENST00000496445 GNMTQ14749 295 aa11.25□□□□□ -0.61
VTI1A-209ENST00000496445 TMEM30BQ3MIR4 351 aa11.25□□□□□ -0.61
VTI1A-209ENST00000496445 ACSM3Q53FZ2 586 aa11.25□□□□□ -0.61
VTI1A-209ENST00000496445 OR10K2Q6IF99 312 aa11.25□□□□□ -0.61
VTI1A-209ENST00000496445 OR2W3Q7Z3T1 314 aa11.25□□□□□ -0.61
VTI1A-209ENST00000496445 STPG2Q8N412 459 aa11.25□□□□□ -0.61
VTI1A-209ENST00000496445 OR2T10Q8NGZ9 312 aa11.25□□□□□ -0.61
VTI1A-209ENST00000496445 NRG4Q8WWG1 115 aa11.25□□□□□ -0.61
VTI1A-209ENST00000496445 RCC1LQ96I51 464 aaKnown RBP11.25□□□□□ -0.61
VTI1A-209ENST00000496445 TMED9Q9BVK6 235 aa11.25□□□□□ -0.61
VTI1A-209ENST00000496445 VCXQ9H320 206 aa11.25□□□□□ -0.61
VTI1A-209ENST00000496445 TAF9BQ9HBM6 251 aa11.25□□□□□ -0.61
VTI1A-209ENST00000496445 LIN7CQ9NUP9 197 aaKnown RBP11.25□□□□□ -0.61
VTI1A-209ENST00000496445 KMT2CQ8NEZ4 4911 aaKnown RBP11.24□□□□□ -0.61
VTI1A-209ENST00000496445 NCBP2LA6PVI3 153 aaKnown RBP11.24□□□□□ -0.61
VTI1A-209ENST00000496445 TXNL1O43396 289 aa11.24□□□□□ -0.61
VTI1A-209ENST00000496445 CA11O75493 328 aa11.24□□□□□ -0.61
VTI1A-209ENST00000496445 MPIG6BO95866 241 aa11.24□□□□□ -0.61
VTI1A-209ENST00000496445 VSIG8P0DPA2 414 aa11.24□□□□□ -0.61
VTI1A-209ENST00000496445 CHATP28329 748 aa11.24□□□□□ -0.61
VTI1A-209ENST00000496445 AQP4P55087 323 aa11.24□□□□□ -0.61
VTI1A-209ENST00000496445 KRTAP10-11P60412 298 aa11.24□□□□□ -0.61
VTI1A-209ENST00000496445 UNC119Q13432 240 aa11.24□□□□□ -0.61
VTI1A-209ENST00000496445 IRF3Q14653 427 aa11.24□□□□□ -0.61
VTI1A-209ENST00000496445 NKAPLQ5M9Q1 402 aa11.24□□□□□ -0.61
VTI1A-209ENST00000496445 RBM48Q5RL73 367 aaKnown RBP11.24□□□□□ -0.61
VTI1A-209ENST00000496445 TRAT1Q6PIZ9 186 aa11.24□□□□□ -0.61
VTI1A-209ENST00000496445 C8orf86Q6ZUL3 223 aa11.24□□□□□ -0.61
VTI1A-209ENST00000496445 MRPL41Q8IXM3 137 aaKnown RBP11.24□□□□□ -0.61
VTI1A-209ENST00000496445 FAM71E2Q8N5Q1 922 aa11.24□□□□□ -0.61
VTI1A-209ENST00000496445 S1PR3Q99500 378 aa11.24□□□□□ -0.61
VTI1A-209ENST00000496445 SULT4A1Q9BR01 284 aa11.24□□□□□ -0.61
VTI1A-209ENST00000496445 ABCG5Q9H222 651 aa11.24□□□□□ -0.61
VTI1A-209ENST00000496445 RAB9BQ9NP90 201 aa11.24□□□□□ -0.61
VTI1A-209ENST00000496445 GHRLQ9UBU3 117 aa11.24□□□□□ -0.61
VTI1A-209ENST00000496445 PTGES3LE9PB15 166 aa11.23□□□□□ -0.61
VTI1A-209ENST00000496445 MOSP00540 346 aa11.23□□□□□ -0.61
VTI1A-209ENST00000496445 THBS3P49746 956 aa11.23□□□□□ -0.61
VTI1A-209ENST00000496445 F2RL1P55085 397 aa11.23□□□□□ -0.61
VTI1A-209ENST00000496445 RPS27AP62979 156 aaKnown RBP11.23□□□□□ -0.61
VTI1A-209ENST00000496445 LSAMPQ13449 338 aa11.23□□□□□ -0.61
VTI1A-209ENST00000496445 SPHARQ15513 63 aa11.23□□□□□ -0.61
VTI1A-209ENST00000496445 C1orf100Q5SVJ3 147 aa11.23□□□□□ -0.61
VTI1A-209ENST00000496445 FOXRED2Q8IWF2 684 aa11.23□□□□□ -0.61
VTI1A-209ENST00000496445 ODF3L1Q8IXM7 274 aa11.23□□□□□ -0.61
VTI1A-209ENST00000496445 MS4A15Q8N5U1 240 aa11.23□□□□□ -0.61
VTI1A-209ENST00000496445 OR52L2PQ8NGH6 319 aa11.23□□□□□ -0.61
VTI1A-209ENST00000496445 PHYHIPQ92561 330 aa11.23□□□□□ -0.61
VTI1A-209ENST00000496445 HSPB9Q9BQS6 159 aa11.23□□□□□ -0.61
VTI1A-209ENST00000496445 NICN1Q9BSH3 213 aa11.23□□□□□ -0.61
VTI1A-209ENST00000496445 CST11Q9H112 138 aa11.23□□□□□ -0.61
VTI1A-209ENST00000496445 DCLRE1BQ9H816 532 aa11.23□□□□□ -0.61
VTI1A-209ENST00000496445 OR2S2Q9NQN1 319 aa11.23□□□□□ -0.61
VTI1A-209ENST00000496445 A0A0A6YYD4 124 aa11.22□□□□□ -0.61
VTI1A-209ENST00000496445 H0YHG0 523 aa11.22□□□□□ -0.61
VTI1A-209ENST00000496445 K7EIL1 84 aa11.22□□□□□ -0.61
VTI1A-209ENST00000496445 LANCL1O43813 399 aa11.22□□□□□ -0.61
VTI1A-209ENST00000496445 UCHL1P09936 223 aa11.22□□□□□ -0.61
VTI1A-209ENST00000496445 UBBP0CG47 229 aa11.22□□□□□ -0.61
VTI1A-209ENST00000496445 CD37P11049 281 aa11.22□□□□□ -0.61
VTI1A-209ENST00000496445 PPP1CCP36873 323 aaKnown RBP11.22□□□□□ -0.61
VTI1A-209ENST00000496445 SLC35B1P78383 322 aa11.22□□□□□ -0.61
VTI1A-209ENST00000496445 QRFPP83859 136 aa11.22□□□□□ -0.61
VTI1A-209ENST00000496445 CFHR3Q02985 330 aa11.22□□□□□ -0.61
VTI1A-209ENST00000496445 MED22Q15528 200 aa11.22□□□□□ -0.61
VTI1A-209ENST00000496445 MORN2Q502X0 79 aa11.22□□□□□ -0.61
VTI1A-209ENST00000496445 GLT8D1Q68CQ7 371 aa11.22□□□□□ -0.61
VTI1A-209ENST00000496445 LCNL1Q6ZST4 164 aa11.22□□□□□ -0.61
VTI1A-209ENST00000496445 CEACAM19Q7Z692 300 aa11.22□□□□□ -0.61
VTI1A-209ENST00000496445 ZNF554Q86TJ5 538 aa11.22□□□□□ -0.61
VTI1A-209ENST00000496445 KLHL30-AS1Q8NEE0 82 aa11.22□□□□□ -0.61
VTI1A-209ENST00000496445 GFI1Q99684 422 aa11.22□□□□□ -0.61
VTI1A-209ENST00000496445 ABHD14AQ9BUJ0 271 aa11.22□□□□□ -0.61
VTI1A-209ENST00000496445 TMEM59Q9BXS4 323 aa11.22□□□□□ -0.61
VTI1A-209ENST00000496445 JPT1Q9UK76 154 aa11.22□□□□□ -0.61
VTI1A-209ENST00000496445 TMEM14DPA8MWL7 114 aa11.21□□□□□ -0.61
VTI1A-209ENST00000496445 AP4M1O00189 453 aa11.21□□□□□ -0.61
VTI1A-209ENST00000496445 SLC22A1O15245 554 aa11.21□□□□□ -0.61
VTI1A-209ENST00000496445 RPLP1P05386 114 aaKnown RBP11.21□□□□□ -0.61
VTI1A-209ENST00000496445 SRMP19623 302 aa11.21□□□□□ -0.61
VTI1A-209ENST00000496445 HTR2CP28335 458 aa11.21□□□□□ -0.61
VTI1A-209ENST00000496445 HTD2P86397 168 aa11.21□□□□□ -0.61
VTI1A-209ENST00000496445 EGFEM1PQ0D2K5 195 aa11.21□□□□□ -0.61
VTI1A-209ENST00000496445 HMGN3Q15651 99 aa11.21□□□□□ -0.61
VTI1A-209ENST00000496445 HSD17B12Q53GQ0 312 aa11.21□□□□□ -0.61
VTI1A-209ENST00000496445 LIPKQ5VXJ0 399 aa11.21□□□□□ -0.61
VTI1A-209ENST00000496445 STEAP3Q658P3 488 aa11.21□□□□□ -0.61
VTI1A-209ENST00000496445 C6orf201Q7Z4U5 140 aa11.21□□□□□ -0.61
VTI1A-209ENST00000496445 SVOPQ8N4V2 548 aa11.21□□□□□ -0.61
VTI1A-209ENST00000496445 COMMD1Q8N668 190 aa11.21□□□□□ -0.61
VTI1A-209ENST00000496445 OR51D1Q8NGF3 324 aa11.21□□□□□ -0.61
VTI1A-209ENST00000496445 OR8H1Q8NGG4 311 aa11.21□□□□□ -0.61
VTI1A-209ENST00000496445 P2RX4Q99571 388 aa11.21□□□□□ -0.61
VTI1A-209ENST00000496445 FAAP24Q9BTP7 215 aa11.21□□□□□ -0.61
VTI1A-209ENST00000496445 TM2D1Q9BX74 207 aa11.21□□□□□ -0.61
VTI1A-209ENST00000496445 ZFP57Q9NU63 452 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms