RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 IGHV3-72A0A0B4J1Y9 119 aa11.53□□□□□ -0.56
PDAP1-204ENST00000496335 IGHV1-3A0A0C4DH29 117 aa11.53□□□□□ -0.56
PDAP1-204ENST00000496335 SOCS1O15524 211 aa11.53□□□□□ -0.56
PDAP1-204ENST00000496335 FBXO24O75426 580 aa11.53□□□□□ -0.56
PDAP1-204ENST00000496335 GAPDHP04406 335 aaKnown RBP11.53□□□□□ -0.56
PDAP1-204ENST00000496335 ZNF816Q0VGE8 651 aaPredicted RBP11.53□□□□□ -0.56
PDAP1-204ENST00000496335 GNMTQ14749 295 aa11.53□□□□□ -0.56
PDAP1-204ENST00000496335 RAB11BQ15907 218 aa11.53□□□□□ -0.56
PDAP1-204ENST00000496335 C9orf152Q5JTZ5 239 aa11.53□□□□□ -0.56
PDAP1-204ENST00000496335 TRAT1Q6PIZ9 186 aa11.53□□□□□ -0.56
PDAP1-204ENST00000496335 SLC25A48Q6ZT89 311 aaKnown RBP11.53□□□□□ -0.56
PDAP1-204ENST00000496335 C8orf31Q8N9H6 132 aa11.53□□□□□ -0.56
PDAP1-204ENST00000496335 OR51D1Q8NGF3 324 aa11.53□□□□□ -0.56
PDAP1-204ENST00000496335 OR52L2PQ8NGH6 319 aa11.53□□□□□ -0.56
PDAP1-204ENST00000496335 ST6GALNAC6Q969X2 333 aa11.53□□□□□ -0.56
PDAP1-204ENST00000496335 RBMXL1Q96E39 390 aaKnown RBP11.53□□□□□ -0.56
PDAP1-204ENST00000496335 Q9H521 79 aa11.53□□□□□ -0.56
PDAP1-204ENST00000496335 RAB9BQ9NP90 201 aa11.53□□□□□ -0.56
PDAP1-204ENST00000496335 OR2S2Q9NQN1 319 aa11.53□□□□□ -0.56
PDAP1-204ENST00000496335 NDUFB11Q9NX14 153 aa11.53□□□□□ -0.56
PDAP1-204ENST00000496335 KCNIP1Q9NZI2 227 aa11.53□□□□□ -0.56
PDAP1-204ENST00000496335 V9GY05 133 aa11.53□□□□□ -0.56
PDAP1-204ENST00000496335 NOTCH3Q9UM47 2321 aa11.53□□□□□ -0.56
PDAP1-204ENST00000496335 SHISA3A0PJX4 238 aa11.52□□□□□ -0.57
PDAP1-204ENST00000496335 IGKV1D-33P01593 117 aa11.52□□□□□ -0.57
PDAP1-204ENST00000496335 IGKV1-33P01594 117 aa11.52□□□□□ -0.57
PDAP1-204ENST00000496335 TMEM11P17152 192 aa11.52□□□□□ -0.57
PDAP1-204ENST00000496335 PLA2G7Q13093 441 aa11.52□□□□□ -0.57
PDAP1-204ENST00000496335 NSUN5P1Q3KNT7 163 aa11.52□□□□□ -0.57
PDAP1-204ENST00000496335 MORN2Q502X0 79 aa11.52□□□□□ -0.57
PDAP1-204ENST00000496335 HES5Q5TA89 166 aa11.52□□□□□ -0.57
PDAP1-204ENST00000496335 Q6ZPA2 131 aa11.52□□□□□ -0.57
PDAP1-204ENST00000496335 OR2W3Q7Z3T1 314 aa11.52□□□□□ -0.57
PDAP1-204ENST00000496335 SPARTQ8N0X7 666 aa11.52□□□□□ -0.57
PDAP1-204ENST00000496335 FAM3DQ96BQ1 224 aa11.52□□□□□ -0.57
PDAP1-204ENST00000496335 CITED2Q99967 270 aaPredicted RBP11.52□□□□□ -0.57
PDAP1-204ENST00000496335 PLEKHJ1Q9NW61 149 aa11.52□□□□□ -0.57
PDAP1-204ENST00000496335 MOB4Q9Y3A3 225 aa11.52□□□□□ -0.57
PDAP1-204ENST00000496335 MRPS14O60783 128 aaKnown RBP11.51□□□□□ -0.57
PDAP1-204ENST00000496335 IL3RAP26951 378 aa11.51□□□□□ -0.57
PDAP1-204ENST00000496335 PPP1CCP36873 323 aaKnown RBP11.51□□□□□ -0.57
PDAP1-204ENST00000496335 OR10A3P58181 314 aa11.51□□□□□ -0.57
PDAP1-204ENST00000496335 C2orf76Q3KRA6 126 aa11.51□□□□□ -0.57
PDAP1-204ENST00000496335 TMEM30BQ3MIR4 351 aa11.51□□□□□ -0.57
PDAP1-204ENST00000496335 Q3ZCU0 254 aa11.51□□□□□ -0.57
PDAP1-204ENST00000496335 UBE2UQ5VVX9 321 aa11.51□□□□□ -0.57
PDAP1-204ENST00000496335 CD200R1LQ6Q8B3 271 aa11.51□□□□□ -0.57
PDAP1-204ENST00000496335 CENPVQ7Z7K6 275 aaPredicted RBP11.51□□□□□ -0.57
PDAP1-204ENST00000496335 ZNF554Q86TJ5 538 aa11.51□□□□□ -0.57
PDAP1-204ENST00000496335 SVOPQ8N4V2 548 aa11.51□□□□□ -0.57
PDAP1-204ENST00000496335 FAM89BQ8N5H3 189 aa11.51□□□□□ -0.57
PDAP1-204ENST00000496335 OR5AU1Q8NGC0 362 aa11.51□□□□□ -0.57
PDAP1-204ENST00000496335 RTN4IP1Q8WWV3 396 aaPredicted RBP11.51□□□□□ -0.57
PDAP1-204ENST00000496335 HDHD3Q9BSH5 251 aaPredicted RBP11.51□□□□□ -0.57
PDAP1-204ENST00000496335 URM1Q9BTM9 101 aaKnown RBP11.51□□□□□ -0.57
PDAP1-204ENST00000496335 CHMP1AQ9HD42 196 aaPredicted RBP11.51□□□□□ -0.57
PDAP1-204ENST00000496335 PLXNB1O43157 2135 aa11.51□□□□□ -0.57
PDAP1-204ENST00000496335 TRDV1A0A1B0GX56 115 aa11.5□□□□□ -0.57
PDAP1-204ENST00000496335 FOXI3A8MTJ6 420 aaPredicted RBP11.5□□□□□ -0.57
PDAP1-204ENST00000496335 ZNF736B4DX44 427 aaPredicted RBP11.5□□□□□ -0.57
PDAP1-204ENST00000496335 M0QZK8 103 aa11.5□□□□□ -0.57
PDAP1-204ENST00000496335 NAPSAO96009 420 aa11.5□□□□□ -0.57
PDAP1-204ENST00000496335 PSMB9P28065 219 aa11.5□□□□□ -0.57
PDAP1-204ENST00000496335 VEGFCP49767 419 aa11.5□□□□□ -0.57
PDAP1-204ENST00000496335 TMEM50BP56557 158 aa11.5□□□□□ -0.57
PDAP1-204ENST00000496335 EBI3Q14213 229 aa11.5□□□□□ -0.57
PDAP1-204ENST00000496335 HMGN3Q15651 99 aa11.5□□□□□ -0.57
PDAP1-204ENST00000496335 C22orf42Q6IC83 251 aa11.5□□□□□ -0.57
PDAP1-204ENST00000496335 C10orf99Q6UWK7 81 aa11.5□□□□□ -0.57
PDAP1-204ENST00000496335 C5orf56Q8N8D9 126 aa11.5□□□□□ -0.57
PDAP1-204ENST00000496335 SETD6Q8TBK2 473 aa11.5□□□□□ -0.57
PDAP1-204ENST00000496335 GALMQ96C23 342 aa11.5□□□□□ -0.57
PDAP1-204ENST00000496335 EAF1Q96JC9 268 aaPredicted RBP11.5□□□□□ -0.57
PDAP1-204ENST00000496335 YTHDF1Q9BYJ9 559 aaKnown RBP11.5□□□□□ -0.57
PDAP1-204ENST00000496335 AK3Q9UIJ7 227 aa11.5□□□□□ -0.57
PDAP1-204ENST00000496335 LRRC42Q9Y546 428 aa11.5□□□□□ -0.57
PDAP1-204ENST00000496335 TRAV1-2A0A0B4J238 106 aa11.49□□□□□ -0.57
PDAP1-204ENST00000496335 TMEM272A0A1B0GTI8 110 aa11.49□□□□□ -0.57
PDAP1-204ENST00000496335 ADARB2-AS1A8MUL3 147 aa11.49□□□□□ -0.57
PDAP1-204ENST00000496335 PDCD5O14737 125 aa11.49□□□□□ -0.57
PDAP1-204ENST00000496335 LDLRAD4O15165 306 aa11.49□□□□□ -0.57
PDAP1-204ENST00000496335 KCNAB3O43448 404 aa11.49□□□□□ -0.57
PDAP1-204ENST00000496335 WIPF1O43516 503 aa11.49□□□□□ -0.57
PDAP1-204ENST00000496335 PSMD7P51665 324 aa11.49□□□□□ -0.57
PDAP1-204ENST00000496335 ZNF137PP52743 207 aa11.49□□□□□ -0.57
PDAP1-204ENST00000496335 HTD2P86397 168 aa11.49□□□□□ -0.57
PDAP1-204ENST00000496335 DEFA6Q01524 100 aa11.49□□□□□ -0.57
PDAP1-204ENST00000496335 TCTEX1D4Q5JR98 221 aa11.49□□□□□ -0.57
PDAP1-204ENST00000496335 STEAP3Q658P3 488 aa11.49□□□□□ -0.57
PDAP1-204ENST00000496335 ZNF880Q6PDB4 577 aa11.49□□□□□ -0.57
PDAP1-204ENST00000496335 TGIF2LXQ8IUE1 241 aa11.49□□□□□ -0.57
PDAP1-204ENST00000496335 IL1F10Q8WWZ1 152 aa11.49□□□□□ -0.57
PDAP1-204ENST00000496335 ARHGAP5-AS1Q96IT6 56 aa11.49□□□□□ -0.57
PDAP1-204ENST00000496335 STEAP1Q9UHE8 339 aa11.49□□□□□ -0.57
PDAP1-204ENST00000496335 JPT1Q9UK76 154 aa11.49□□□□□ -0.57
PDAP1-204ENST00000496335 RRP15Q9Y3B9 282 aaKnown RBP11.49□□□□□ -0.57
PDAP1-204ENST00000496335 A0A0B4J203 849 aa11.48□□□□□ -0.57
PDAP1-204ENST00000496335 A0A1W2PRX2 142 aa11.48□□□□□ -0.57
PDAP1-204ENST00000496335 SMIM30A4D0T7 59 aa11.48□□□□□ -0.57
PDAP1-204ENST00000496335 NCBP2LA6PVI3 153 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms