RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 BCL7BQ9BQE9 202 aa9.8□□□□□ -0.84
CSNK1E-213ENST00000495232 HDHD3Q9BSH5 251 aaPredicted RBP9.8□□□□□ -0.84
CSNK1E-213ENST00000495232 FBN1P35555 2871 aaKnown RBP9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 CCDC160A6NGH7 325 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 H3BUX3 64 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 MFNGO00587 321 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 HSPA12AO43301 675 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 LPLP06858 475 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 GSTP1P09211 210 aaKnown RBP9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 PAX6P26367 422 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 IL3RAP26951 378 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 MNDAP41218 407 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 LOXL3P58215 753 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 GNG2P59768 71 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 ACTG1P63261 375 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 HLA-DRB3P79483 266 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 HTD2P86397 168 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 PITPNAQ00169 270 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 MADCAM1Q13477 382 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 HMGN3Q15651 99 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 AANATQ16613 207 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 KRTAP24-1Q3LI83 254 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 Q3ZCU0 254 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 STEAP3Q658P3 488 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 CCDC144NLQ6NUI1 221 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 C16orf87Q6PH81 154 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 SAMD12Q8N8I0 201 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 OR10V1Q8NGI7 309 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 RPEQ96AT9 228 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 Q9N2K0 584 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 COMMD3Q9UBI1 195 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 JPT1Q9UK76 154 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 KCNK7Q9Y2U2 307 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 ATRQ13535 2644 aa9.79□□□□□ -0.84
CSNK1E-213ENST00000495232 TRAV18A0A075B6X5 111 aa9.78□□□□□ -0.84
CSNK1E-213ENST00000495232 A0A1W2PPE3 182 aa9.78□□□□□ -0.84
CSNK1E-213ENST00000495232 FCGR3AP08637 254 aa9.78□□□□□ -0.84
CSNK1E-213ENST00000495232 ZNF182P17025 639 aaPredicted RBP9.78□□□□□ -0.84
CSNK1E-213ENST00000495232 BRS3P32247 399 aa9.78□□□□□ -0.84
CSNK1E-213ENST00000495232 KIR2DS4P43632 304 aa9.78□□□□□ -0.84
CSNK1E-213ENST00000495232 KIR2DS1Q14954 304 aa9.78□□□□□ -0.84
CSNK1E-213ENST00000495232 PNLIPRP3Q17RR3 467 aa9.78□□□□□ -0.84
CSNK1E-213ENST00000495232 HACD4Q5VWC8 232 aa9.78□□□□□ -0.84
CSNK1E-213ENST00000495232 C8orf31Q8N9H6 132 aa9.78□□□□□ -0.84
CSNK1E-213ENST00000495232 OR52L2PQ8NGH6 319 aa9.78□□□□□ -0.84
CSNK1E-213ENST00000495232 GCDHQ92947 438 aaPredicted RBP9.78□□□□□ -0.84
CSNK1E-213ENST00000495232 TOMM40LQ969M1 308 aa9.78□□□□□ -0.84
CSNK1E-213ENST00000495232 SLC25A38Q96DW6 304 aa9.78□□□□□ -0.84
CSNK1E-213ENST00000495232 AJUBAQ96IF1 538 aa9.78□□□□□ -0.84
CSNK1E-213ENST00000495232 C19orf24Q9BVV8 132 aa9.78□□□□□ -0.84
CSNK1E-213ENST00000495232 CHIAQ9BZP6 476 aa9.78□□□□□ -0.84
CSNK1E-213ENST00000495232 ABCG5Q9H222 651 aa9.78□□□□□ -0.84
CSNK1E-213ENST00000495232 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.78□□□□□ -0.84
CSNK1E-213ENST00000495232 SLC23A1Q9UHI7 598 aa9.78□□□□□ -0.84
CSNK1E-213ENST00000495232 VPREB3Q9UKI3 123 aa9.78□□□□□ -0.84
CSNK1E-213ENST00000495232 SMIM31A0A1B0GVY4 71 aa9.77□□□□□ -0.85
CSNK1E-213ENST00000495232 TMEM235A6NFC5 223 aa9.77□□□□□ -0.85
CSNK1E-213ENST00000495232 VGLL3A8MV65 326 aa9.77□□□□□ -0.85
CSNK1E-213ENST00000495232 OOSP1A8MZH6 123 aa9.77□□□□□ -0.85
CSNK1E-213ENST00000495232 TRDCB7Z8K6 153 aa9.77□□□□□ -0.85
CSNK1E-213ENST00000495232 YPEL1O60688 119 aa9.77□□□□□ -0.85
CSNK1E-213ENST00000495232 ZBTB25P24278 435 aa9.77□□□□□ -0.85
CSNK1E-213ENST00000495232 PPP1CCP36873 323 aaKnown RBP9.77□□□□□ -0.85
CSNK1E-213ENST00000495232 RAB7AP51149 207 aa9.77□□□□□ -0.85
CSNK1E-213ENST00000495232 LY6EQ16553 131 aa9.77□□□□□ -0.85
CSNK1E-213ENST00000495232 ZNF260Q3ZCT1 412 aa9.77□□□□□ -0.85
CSNK1E-213ENST00000495232 MORN2Q502X0 79 aa9.77□□□□□ -0.85
CSNK1E-213ENST00000495232 TMEM69Q5SWH9 247 aa9.77□□□□□ -0.85
CSNK1E-213ENST00000495232 LDLRAD2Q5SZI1 272 aa9.77□□□□□ -0.85
CSNK1E-213ENST00000495232 UTF1Q5T230 341 aa9.77□□□□□ -0.85
CSNK1E-213ENST00000495232 TPTE2P1Q5T6R2 138 aa9.77□□□□□ -0.85
CSNK1E-213ENST00000495232 IZUMO1Q8IYV9 350 aa9.77□□□□□ -0.85
CSNK1E-213ENST00000495232 DYNAPQ8N1N2 210 aa9.77□□□□□ -0.85
CSNK1E-213ENST00000495232 OR2AK2Q8NG84 335 aa9.77□□□□□ -0.85
CSNK1E-213ENST00000495232 CMTM3Q96MX0 182 aa9.77□□□□□ -0.85
CSNK1E-213ENST00000495232 YPEL2Q96QA6 119 aa9.77□□□□□ -0.85
CSNK1E-213ENST00000495232 OCSTAMPQ9BR26 566 aa9.77□□□□□ -0.85
CSNK1E-213ENST00000495232 RAB18Q9NP72 206 aa9.77□□□□□ -0.85
CSNK1E-213ENST00000495232 PITPNC1Q9UKF7 332 aa9.77□□□□□ -0.85
CSNK1E-213ENST00000495232 FAM181BA6NEQ2 426 aa9.76□□□□□ -0.85
CSNK1E-213ENST00000495232 FABP7O15540 132 aa9.76□□□□□ -0.85
CSNK1E-213ENST00000495232 XRCC3O43542 346 aa9.76□□□□□ -0.85
CSNK1E-213ENST00000495232 GPR137BO60478 399 aa9.76□□□□□ -0.85
CSNK1E-213ENST00000495232 SCTP09683 121 aa9.76□□□□□ -0.85
CSNK1E-213ENST00000495232 DTYMKP23919 212 aa9.76□□□□□ -0.85
CSNK1E-213ENST00000495232 CEACAM6P40199 344 aa9.76□□□□□ -0.85
CSNK1E-213ENST00000495232 RAB13P51153 203 aa9.76□□□□□ -0.85
CSNK1E-213ENST00000495232 RPL15P61313 204 aaKnown RBP9.76□□□□□ -0.85
CSNK1E-213ENST00000495232 GNMTQ14749 295 aa9.76□□□□□ -0.85
CSNK1E-213ENST00000495232 SPCS2Q15005 226 aa9.76□□□□□ -0.85
CSNK1E-213ENST00000495232 SRSF7Q16629 238 aaKnown RBP eCLIP9.76□□□□□ -0.85
CSNK1E-213ENST00000495232 LIAT1Q6ZQX7 453 aa9.76□□□□□ -0.85
CSNK1E-213ENST00000495232 SLC25A48Q6ZT89 311 aaKnown RBP9.76□□□□□ -0.85
CSNK1E-213ENST00000495232 C5orf24Q7Z6I8 188 aa9.76□□□□□ -0.85
CSNK1E-213ENST00000495232 LINC00311Q8N616 119 aa9.76□□□□□ -0.85
CSNK1E-213ENST00000495232 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.76□□□□□ -0.85
CSNK1E-213ENST00000495232 OR4A4PQ8NGN8 299 aa9.76□□□□□ -0.85
CSNK1E-213ENST00000495232 ISOC1Q96CN7 298 aa9.76□□□□□ -0.85
CSNK1E-213ENST00000495232 ABHD14AQ9BUJ0 271 aa9.76□□□□□ -0.85
CSNK1E-213ENST00000495232 ST6GALNAC5Q9BVH7 336 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms