RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 ATP1B3P54709 279 aa6.32□□□□□ -1.4
GARNL3-219ENST00000495172 EXOSC2Q13868 293 aaKnown RBP6.32□□□□□ -1.4
GARNL3-219ENST00000495172 ANKRD55Q3KP44 614 aa6.32□□□□□ -1.4
GARNL3-219ENST00000495172 FAM131AQ6UXB0 335 aa6.32□□□□□ -1.4
GARNL3-219ENST00000495172 OTOSQ8NHW6 89 aa6.32□□□□□ -1.4
GARNL3-219ENST00000495172 CCDC107Q8WV48 283 aa6.32□□□□□ -1.4
GARNL3-219ENST00000495172 ARL11Q969Q4 196 aa6.32□□□□□ -1.4
GARNL3-219ENST00000495172 FAM46BQ96A09 425 aa6.32□□□□□ -1.4
GARNL3-219ENST00000495172 GALNT14Q96FL9 552 aa6.32□□□□□ -1.4
GARNL3-219ENST00000495172 NR1H4Q96RI1 486 aaPredicted RBP6.32□□□□□ -1.4
GARNL3-219ENST00000495172 SSBP4Q9BWG4 385 aaPredicted RBP6.32□□□□□ -1.4
GARNL3-219ENST00000495172 YTHDF1Q9BYJ9 559 aaKnown RBP6.32□□□□□ -1.4
GARNL3-219ENST00000495172 KRTAP1-5Q9BYS1 174 aa6.32□□□□□ -1.4
GARNL3-219ENST00000495172 COMMD4Q9H0A8 199 aa6.32□□□□□ -1.4
GARNL3-219ENST00000495172 DHDHQ9UQ10 334 aa6.32□□□□□ -1.4
GARNL3-219ENST00000495172 DMRT1Q9Y5R6 373 aa6.32□□□□□ -1.4
GARNL3-219ENST00000495172 S4R3C0 116 aa6.32□□□□□ -1.4
GARNL3-219ENST00000495172 A0A1W2PRQ8 180 aa6.31□□□□□ -1.4
GARNL3-219ENST00000495172 ZNF320A2RRD8 509 aa6.31□□□□□ -1.4
GARNL3-219ENST00000495172 H0YJX3 145 aa6.31□□□□□ -1.4
GARNL3-219ENST00000495172 TGOLN2O43493 480 aa6.31□□□□□ -1.4
GARNL3-219ENST00000495172 CA1P00915 261 aaPredicted RBP6.31□□□□□ -1.4
GARNL3-219ENST00000495172 IFNA14P01570 189 aa6.31□□□□□ -1.4
GARNL3-219ENST00000495172 MRPL19P49406 292 aaKnown RBP6.31□□□□□ -1.4
GARNL3-219ENST00000495172 RPS27AP62979 156 aaKnown RBP6.31□□□□□ -1.4
GARNL3-219ENST00000495172 CKAP4Q07065 602 aaKnown RBP6.31□□□□□ -1.4
GARNL3-219ENST00000495172 DGCR6Q14129 220 aa6.31□□□□□ -1.4
GARNL3-219ENST00000495172 ICAM4Q14773 271 aa6.31□□□□□ -1.4
GARNL3-219ENST00000495172 IFI44LQ53G44 452 aa6.31□□□□□ -1.4
GARNL3-219ENST00000495172 PAN3Q58A45 887 aaKnown RBP6.31□□□□□ -1.4
GARNL3-219ENST00000495172 EPGNQ6UW88 154 aa6.31□□□□□ -1.4
GARNL3-219ENST00000495172 GLDNQ6ZMI3 551 aaPredicted RBP6.31□□□□□ -1.4
GARNL3-219ENST00000495172 CYYR1Q96J86 154 aa6.31□□□□□ -1.4
GARNL3-219ENST00000495172 COA4Q9NYJ1 87 aa6.31□□□□□ -1.4
GARNL3-219ENST00000495172 LGALS13Q9UHV8 139 aa6.31□□□□□ -1.4
GARNL3-219ENST00000495172 ZNF230Q9UIE0 474 aaPredicted RBP6.31□□□□□ -1.4
GARNL3-219ENST00000495172 ENPP4Q9Y6X5 453 aa6.31□□□□□ -1.4
GARNL3-219ENST00000495172 GAS8-AS1O95177 125 aa6.3□□□□□ -1.4
GARNL3-219ENST00000495172 SCTP09683 121 aa6.3□□□□□ -1.4
GARNL3-219ENST00000495172 FUT6P51993 359 aa6.3□□□□□ -1.4
GARNL3-219ENST00000495172 ZNF137PP52743 207 aa6.3□□□□□ -1.4
GARNL3-219ENST00000495172 PJVKQ0ZLH3 352 aa6.3□□□□□ -1.4
GARNL3-219ENST00000495172 RIPK1Q13546 671 aa6.3□□□□□ -1.4
GARNL3-219ENST00000495172 TMEM187Q14656 261 aa6.3□□□□□ -1.4
GARNL3-219ENST00000495172 GNMTQ14749 295 aa6.3□□□□□ -1.4
GARNL3-219ENST00000495172 FXYD3Q14802 87 aa6.3□□□□□ -1.4
GARNL3-219ENST00000495172 METTL21CQ5VZV1 264 aa6.3□□□□□ -1.4
GARNL3-219ENST00000495172 RBPMS2Q6ZRY4 209 aaKnown RBP6.3□□□□□ -1.4
GARNL3-219ENST00000495172 FKBP9P1Q75LS8 142 aa6.3□□□□□ -1.4
GARNL3-219ENST00000495172 SHFQ7M4L6 423 aa6.3□□□□□ -1.4
GARNL3-219ENST00000495172 ODF3L1Q8IXM7 274 aa6.3□□□□□ -1.4
GARNL3-219ENST00000495172 Q8IYB0 196 aa6.3□□□□□ -1.4
GARNL3-219ENST00000495172 BORCS8Q96FH0 119 aa6.3□□□□□ -1.4
GARNL3-219ENST00000495172 CNN2Q99439 309 aaKnown RBP6.3□□□□□ -1.4
GARNL3-219ENST00000495172 OR51V1Q9H2C8 321 aa6.3□□□□□ -1.4
GARNL3-219ENST00000495172 ANKRD19PQ9H560 264 aa6.3□□□□□ -1.4
GARNL3-219ENST00000495172 AKIP1Q9NQ31 210 aa6.3□□□□□ -1.4
GARNL3-219ENST00000495172 KRT84Q9NSB2 600 aa6.3□□□□□ -1.4
GARNL3-219ENST00000495172 METTL1Q9UBP6 276 aaKnown RBP6.3□□□□□ -1.4
GARNL3-219ENST00000495172 IGKV1-9A0A0C4DH69 117 aa6.29□□□□□ -1.4
GARNL3-219ENST00000495172 FXYD1O00168 92 aa6.29□□□□□ -1.4
GARNL3-219ENST00000495172 ANGPT2O15123 496 aa6.29□□□□□ -1.4
GARNL3-219ENST00000495172 TXNL1O43396 289 aa6.29□□□□□ -1.4
GARNL3-219ENST00000495172 LANCL1O43813 399 aa6.29□□□□□ -1.4
GARNL3-219ENST00000495172 HTR3BO95264 441 aa6.29□□□□□ -1.4
GARNL3-219ENST00000495172 AADACP22760 399 aa6.29□□□□□ -1.4
GARNL3-219ENST00000495172 GSSP48637 474 aa6.29□□□□□ -1.4
GARNL3-219ENST00000495172 NUDT2P50583 147 aa6.29□□□□□ -1.4
GARNL3-219ENST00000495172 ELLP55199 621 aaPredicted RBP6.29□□□□□ -1.4
GARNL3-219ENST00000495172 MED21Q13503 144 aa6.29□□□□□ -1.4
GARNL3-219ENST00000495172 MED22Q15528 200 aa6.29□□□□□ -1.4
GARNL3-219ENST00000495172 RNF212Q495C1 297 aa6.29□□□□□ -1.4
GARNL3-219ENST00000495172 UNQ9165/PRO28630Q6UXU0 137 aa6.29□□□□□ -1.4
GARNL3-219ENST00000495172 C19orf35Q6ZS72 473 aa6.29□□□□□ -1.4
GARNL3-219ENST00000495172 ANKRD42Q8N9B4 389 aa6.29□□□□□ -1.4
GARNL3-219ENST00000495172 OR10A7Q8NGE5 316 aa6.29□□□□□ -1.4
GARNL3-219ENST00000495172 NDUFAF4Q9P032 175 aa6.29□□□□□ -1.4
GARNL3-219ENST00000495172 NUFIP1Q9UHK0 495 aaKnown RBP6.29□□□□□ -1.4
GARNL3-219ENST00000495172 FSIP2Q5CZC0 6907 aa6.29□□□□□ -1.4
GARNL3-219ENST00000495172 SRSF10O75494 262 aaKnown RBP6.28□□□□□ -1.4
GARNL3-219ENST00000495172 SOX14O95416 240 aa6.28□□□□□ -1.4
GARNL3-219ENST00000495172 IGLV2-23P01705 113 aa6.28□□□□□ -1.4
GARNL3-219ENST00000495172 H2AFB1P0C5Y9 115 aa6.28□□□□□ -1.4
GARNL3-219ENST00000495172 H2AFB2P0C5Z0 115 aa6.28□□□□□ -1.4
GARNL3-219ENST00000495172 MTCP1P56278 107 aa6.28□□□□□ -1.4
GARNL3-219ENST00000495172 RHOGP84095 191 aa6.28□□□□□ -1.4
GARNL3-219ENST00000495172 PDZK1IP1Q13113 114 aa6.28□□□□□ -1.4
GARNL3-219ENST00000495172 ZNF585BQ52M93 769 aa6.28□□□□□ -1.4
GARNL3-219ENST00000495172 ZNF562Q6V9R5 426 aa6.28□□□□□ -1.4
GARNL3-219ENST00000495172 CYP4Z1Q86W10 505 aa6.28□□□□□ -1.4
GARNL3-219ENST00000495172 IFT20Q8IY31 132 aa6.28□□□□□ -1.4
GARNL3-219ENST00000495172 SLC38A6Q8IZM9 456 aa6.28□□□□□ -1.4
GARNL3-219ENST00000495172 PRR18Q8N4B5 295 aa6.28□□□□□ -1.4
GARNL3-219ENST00000495172 C8orf31Q8N9H6 132 aa6.28□□□□□ -1.4
GARNL3-219ENST00000495172 OR13C5Q8NGS8 318 aa6.28□□□□□ -1.4
GARNL3-219ENST00000495172 ZNRF2Q8NHG8 242 aa6.28□□□□□ -1.4
GARNL3-219ENST00000495172 THRSPQ92748 146 aa6.28□□□□□ -1.4
GARNL3-219ENST00000495172 PPCSQ9HAB8 311 aa6.28□□□□□ -1.4
GARNL3-219ENST00000495172 ARMC1Q9NVT9 282 aa6.28□□□□□ -1.4
GARNL3-219ENST00000495172 FAM118AQ9NWS6 357 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms