RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	ARGFX	A6NJG6	315 aa		11.44	□□□□□ -0.58
SUPT20H-222	ENST00000495071	SEC14L6	B5MCN3	397 aa		11.44	□□□□□ -0.58
SUPT20H-222	ENST00000495071	CLDN34	H7C241	214 aa		11.44	□□□□□ -0.58
SUPT20H-222	ENST00000495071	SERPINA7	P05543	415 aa		11.44	□□□□□ -0.58
SUPT20H-222	ENST00000495071	ZFP36L1	Q07352	338 aa	Known RBP	11.44	□□□□□ -0.58
SUPT20H-222	ENST00000495071	SRSF7	Q16629	238 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
SUPT20H-222	ENST00000495071	PCSK4	Q6UW60	755 aa		11.44	□□□□□ -0.58
SUPT20H-222	ENST00000495071	YPEL4	Q96NS1	127 aa		11.44	□□□□□ -0.58
SUPT20H-222	ENST00000495071	C12orf49	Q9H741	205 aa		11.44	□□□□□ -0.58
SUPT20H-222	ENST00000495071	KNTC1	P50748	2209 aa		11.44	□□□□□ -0.58
SUPT20H-222	ENST00000495071	IFNA1	P01562	189 aa		11.44	□□□□□ -0.58
SUPT20H-222	ENST00000495071	GFRA1	P56159	465 aa		11.44	□□□□□ -0.58
SUPT20H-222	ENST00000495071		Q6ZRM9	215 aa		11.44	□□□□□ -0.58
SUPT20H-222	ENST00000495071	CT55	Q8WUE5	264 aa		11.44	□□□□□ -0.58
SUPT20H-222	ENST00000495071	TMEM45B	Q96B21	275 aa		11.44	□□□□□ -0.58
SUPT20H-222	ENST00000495071	CABLES2	Q9BTV7	478 aa		11.44	□□□□□ -0.58
SUPT20H-222	ENST00000495071	HES7	Q9BYE0	225 aa		11.44	□□□□□ -0.58
SUPT20H-222	ENST00000495071	DLL3	Q9NYJ7	618 aa		11.44	□□□□□ -0.58
SUPT20H-222	ENST00000495071	VPS13A	Q96RL7	3174 aa		11.44	□□□□□ -0.58
SUPT20H-222	ENST00000495071	TRAV24	A0A0B4J272	114 aa		11.44	□□□□□ -0.58
SUPT20H-222	ENST00000495071	NTN3	O00634	580 aa	Predicted RBP	11.44	□□□□□ -0.58
SUPT20H-222	ENST00000495071	ARR3	P36575	388 aa		11.44	□□□□□ -0.58
SUPT20H-222	ENST00000495071	GFI1B	Q5VTD9	330 aa		11.44	□□□□□ -0.58
SUPT20H-222	ENST00000495071	ZNF324B	Q6AW86	544 aa	Predicted RBP	11.44	□□□□□ -0.58
SUPT20H-222	ENST00000495071	C6orf15	Q6UXA7	325 aa	Predicted RBP	11.44	□□□□□ -0.58
SUPT20H-222	ENST00000495071	UBE2L5P	A0A1B0GUS4	154 aa		11.43	□□□□□ -0.58
SUPT20H-222	ENST00000495071	ZNF503-AS2	A6NEH8	195 aa		11.43	□□□□□ -0.58
SUPT20H-222	ENST00000495071		B4DEV8	164 aa		11.43	□□□□□ -0.58
SUPT20H-222	ENST00000495071	HMGB3	O15347	200 aa	Known RBP	11.43	□□□□□ -0.58
SUPT20H-222	ENST00000495071	LILRA1	O75019	489 aa		11.43	□□□□□ -0.58
SUPT20H-222	ENST00000495071	RHBDL1	O75783	438 aa		11.43	□□□□□ -0.58
SUPT20H-222	ENST00000495071	CLDN1	O95832	211 aa		11.43	□□□□□ -0.58
SUPT20H-222	ENST00000495071	FABP4	P15090	132 aa		11.43	□□□□□ -0.58
SUPT20H-222	ENST00000495071	MDK	P21741	143 aa	Predicted RBP	11.43	□□□□□ -0.58
SUPT20H-222	ENST00000495071	DEFA6	Q01524	100 aa		11.43	□□□□□ -0.58
SUPT20H-222	ENST00000495071	ADIRF	Q15847	76 aa		11.43	□□□□□ -0.58
SUPT20H-222	ENST00000495071	C3AR1	Q16581	482 aa		11.43	□□□□□ -0.58
SUPT20H-222	ENST00000495071	SLC39A9	Q9NUM3	307 aa		11.43	□□□□□ -0.58
SUPT20H-222	ENST00000495071	DMRT1	Q9Y5R6	373 aa		11.43	□□□□□ -0.58
SUPT20H-222	ENST00000495071	LPAL2	Q16609	132 aa		11.43	□□□□□ -0.58
SUPT20H-222	ENST00000495071	NRN1L	Q496H8	165 aa		11.43	□□□□□ -0.58
SUPT20H-222	ENST00000495071	ZNF880	Q6PDB4	577 aa		11.43	□□□□□ -0.58
SUPT20H-222	ENST00000495071	LINC00696	Q6ZRV3	163 aa		11.43	□□□□□ -0.58
SUPT20H-222	ENST00000495071	LHX4	Q969G2	390 aa		11.43	□□□□□ -0.58
SUPT20H-222	ENST00000495071	GFOD1	Q9NXC2	390 aa		11.43	□□□□□ -0.58
SUPT20H-222	ENST00000495071	RNF150	Q9ULK6	438 aa		11.43	□□□□□ -0.58
SUPT20H-222	ENST00000495071	MAP1LC3B2	A6NCE7	125 aa		11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	NDUFS6	O75380	124 aa	Known RBP	11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	RBMXL2	O75526	392 aa	Known RBP	11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	CLN3	Q13286	438 aa		11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	MYPOP	Q86VE0	399 aa	Predicted RBP	11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	OR5P3	Q8WZ94	311 aa		11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	RCC1L	Q96I51	464 aa	Known RBP	11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	MAP1LC3B	Q9GZQ8	125 aa		11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	TINAG	Q9UJW2	476 aa		11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	DIDO1	Q9BTC0	2240 aa	Known RBP	11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	CER1	O95813	267 aa		11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	TRGC1	P0CF51	173 aa		11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	MDH2	P40926	338 aa	Known RBP	11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	MAGEA5	P43359	124 aa		11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	PNRC1	Q12796	327 aa	Predicted RBP	11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	SSPN	Q14714	243 aa		11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	OR2M7	Q8NG81	312 aa		11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	FAM173A	Q9BQD7	235 aa		11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	LOXL2	Q9Y4K0	774 aa		11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	OR5B21	A6NL26	309 aa		11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	LY86	O95711	162 aa		11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	TESK1	Q15569	626 aa		11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	NECAP1	Q8NC96	275 aa		11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	SMIM7	Q9BQ49	75 aa		11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	LIN7C	Q9NUP9	197 aa	Known RBP	11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	PLA2G3	Q9NZ20	509 aa		11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	CISD1	Q9NZ45	108 aa	Known RBP	11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	ZDBF2	Q9HCK1	2354 aa		11.42	□□□□□ -0.58
SUPT20H-222	ENST00000495071	LRP5L	A4QPB2	252 aa		11.41	□□□□□ -0.58
SUPT20H-222	ENST00000495071	IFITM10	A6NMD0	228 aa		11.41	□□□□□ -0.58
SUPT20H-222	ENST00000495071	ARL16	Q0P5N6	197 aa		11.41	□□□□□ -0.58
SUPT20H-222	ENST00000495071	FAM90A2P	Q658T7	463 aa		11.41	□□□□□ -0.58
SUPT20H-222	ENST00000495071	LURAP1L	Q8IV03	231 aa		11.41	□□□□□ -0.58
SUPT20H-222	ENST00000495071	FRZB	Q92765	325 aa		11.41	□□□□□ -0.58
SUPT20H-222	ENST00000495071	SNX22	Q96L94	193 aa		11.41	□□□□□ -0.58
SUPT20H-222	ENST00000495071	LINC00470	Q9BZP3	86 aa		11.41	□□□□□ -0.58
SUPT20H-222	ENST00000495071	MPC1	Q9Y5U8	109 aa		11.41	□□□□□ -0.58
SUPT20H-222	ENST00000495071	KIAA2026	Q5HYC2	2103 aa		11.41	□□□□□ -0.58
SUPT20H-222	ENST00000495071	KIAA1549	Q9HCM3	1950 aa		11.41	□□□□□ -0.58
SUPT20H-222	ENST00000495071	CYB5R3	P00387	301 aa	Predicted RBP	11.41	□□□□□ -0.58
SUPT20H-222	ENST00000495071	CDPF1	Q6NVV7	123 aa		11.41	□□□□□ -0.58
SUPT20H-222	ENST00000495071	BEND4	Q6ZU67	534 aa		11.41	□□□□□ -0.58
SUPT20H-222	ENST00000495071	LINC00596	Q86U02	117 aa		11.41	□□□□□ -0.58
SUPT20H-222	ENST00000495071	ZNF525	Q8N782	197 aa		11.41	□□□□□ -0.58
SUPT20H-222	ENST00000495071	RPUSD4	Q96CM3	377 aa	Known RBP	11.41	□□□□□ -0.58
SUPT20H-222	ENST00000495071	POM121L2	Q96KW2	1035 aa		11.41	□□□□□ -0.58
SUPT20H-222	ENST00000495071	OR4C12	Q96R67	309 aa		11.41	□□□□□ -0.58
SUPT20H-222	ENST00000495071	SMOC1	Q9H4F8	434 aa		11.41	□□□□□ -0.58
SUPT20H-222	ENST00000495071	ABI3	Q9P2A4	366 aa		11.41	□□□□□ -0.58
SUPT20H-222	ENST00000495071	VAX2	Q9UIW0	290 aa		11.41	□□□□□ -0.58
SUPT20H-222	ENST00000495071	SOD3	P08294	240 aa		11.41	□□□□□ -0.58
SUPT20H-222	ENST00000495071	CEACAM6	P40199	344 aa		11.41	□□□□□ -0.58
SUPT20H-222	ENST00000495071	IGKV3D-15	A0A087WSY6	115 aa		11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	TRAV1-1	A0A0B4J248	108 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms