RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 C20orf85Q9H1P6 137 aa10.72□□□□□ -0.69
ERCC3-209ENST00000494464 MEGF9Q9H1U4 602 aa10.72□□□□□ -0.69
ERCC3-209ENST00000494464 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.72□□□□□ -0.69
ERCC3-209ENST00000494464 IL36GQ9NZH8 169 aa10.72□□□□□ -0.69
ERCC3-209ENST00000494464 A0A0A6YYD4 124 aa10.71□□□□□ -0.69
ERCC3-209ENST00000494464 hADV38S2A0JD32 116 aa10.71□□□□□ -0.69
ERCC3-209ENST00000494464 FOXI3A8MTJ6 420 aaPredicted RBP10.71□□□□□ -0.69
ERCC3-209ENST00000494464 ODF3BA8MYP8 253 aa10.71□□□□□ -0.69
ERCC3-209ENST00000494464 PRAF2O60831 178 aa10.71□□□□□ -0.69
ERCC3-209ENST00000494464 ZNF780AO75290 641 aaPredicted RBP10.71□□□□□ -0.69
ERCC3-209ENST00000494464 CRTAPO75718 401 aaPredicted RBP10.71□□□□□ -0.69
ERCC3-209ENST00000494464 HIST1H1DP16402 221 aaKnown RBP10.71□□□□□ -0.69
ERCC3-209ENST00000494464 GABRR1P24046 479 aa10.71□□□□□ -0.69
ERCC3-209ENST00000494464 COX7A1P24310 79 aa10.71□□□□□ -0.69
ERCC3-209ENST00000494464 LMO1P25800 156 aa10.71□□□□□ -0.69
ERCC3-209ENST00000494464 ERP29P30040 261 aaKnown RBP10.71□□□□□ -0.69
ERCC3-209ENST00000494464 OR3A1P47881 315 aa10.71□□□□□ -0.69
ERCC3-209ENST00000494464 MECP2P51608 486 aaKnown RBP10.71□□□□□ -0.69
ERCC3-209ENST00000494464 CCR6P51684 374 aa10.71□□□□□ -0.69
ERCC3-209ENST00000494464 EDDM3AQ14507 147 aa10.71□□□□□ -0.69
ERCC3-209ENST00000494464 ARL6IP1Q15041 203 aa10.71□□□□□ -0.69
ERCC3-209ENST00000494464 PNLIPRP3Q17RR3 467 aa10.71□□□□□ -0.69
ERCC3-209ENST00000494464 LRRC75BQ2VPJ9 315 aa10.71□□□□□ -0.69
ERCC3-209ENST00000494464 ZNF782Q6ZMW2 699 aaPredicted RBP10.71□□□□□ -0.69
ERCC3-209ENST00000494464 PXT1Q8NFP0 134 aa10.71□□□□□ -0.69
ERCC3-209ENST00000494464 OR6F1Q8NGZ6 308 aa10.71□□□□□ -0.69
ERCC3-209ENST00000494464 S100A13Q99584 98 aa10.71□□□□□ -0.69
ERCC3-209ENST00000494464 CHST6Q9GZX3 395 aa10.71□□□□□ -0.69
ERCC3-209ENST00000494464 ANAPC10Q9UM13 185 aa10.71□□□□□ -0.69
ERCC3-209ENST00000494464 NBEAL1Q6ZS30 2694 aa10.71□□□□□ -0.7
ERCC3-209ENST00000494464 TMEM235A6NFC5 223 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 FAM90A8PA6NJQ4 464 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 H3BUX3 64 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 MFNGO00587 321 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 SH2D1BO14796 132 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 CA11O75493 328 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 CCNKO75909 580 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 TSPAN9O75954 239 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 NDUFB6O95139 128 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 OR2H2O95918 312 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 CD74P04233 296 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 CSN2P05814 226 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 H2AFB2P0C5Z0 115 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 IGHV1-8P0DP01 117 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 GTF2F2P13984 249 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 MGMTP16455 207 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 TBPP20226 339 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 DUSP1P28562 367 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 VEGFCP49767 419 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 SNU13P55769 128 aaKnown RBP10.7□□□□□ -0.7
ERCC3-209ENST00000494464 P2RX3P56373 397 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 CD300CQ08708 224 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 CDNFQ49AH0 187 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 SLC22A6Q4U2R8 563 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 ZNF626Q68DY1 528 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 Q6ZSV7 163 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 OR4S1Q8NGB4 309 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 OR11H6Q8NGC7 330 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 OR4C16Q8NGL9 310 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 OR13D1Q8NGV5 346 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 LINC01006Q8NI28 216 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 C17orf50Q8WW18 174 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 SSX3Q99909 188 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 NICN1Q9BSH3 213 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 METTL9Q9H1A3 318 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 C16orf95Q9H693 158 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 ING4Q9UNL4 249 aa10.7□□□□□ -0.7
ERCC3-209ENST00000494464 TBL2Q9Y4P3 447 aaKnown RBP10.7□□□□□ -0.7
ERCC3-209ENST00000494464 SIRPB1O00241 398 aa10.69□□□□□ -0.7
ERCC3-209ENST00000494464 PEX14O75381 377 aa10.69□□□□□ -0.7
ERCC3-209ENST00000494464 LGALS4P56470 323 aa10.69□□□□□ -0.7
ERCC3-209ENST00000494464 RRAS2P62070 204 aaPredicted RBP10.69□□□□□ -0.7
ERCC3-209ENST00000494464 RBMS2Q15434 407 aaKnown RBP10.69□□□□□ -0.7
ERCC3-209ENST00000494464 ELP2Q6IA86 826 aa10.69□□□□□ -0.7
ERCC3-209ENST00000494464 STEAP1BQ6NZ63 245 aa10.69□□□□□ -0.7
ERCC3-209ENST00000494464 TRAPPC6BQ86SZ2 158 aa10.69□□□□□ -0.7
ERCC3-209ENST00000494464 TPRX1Q8N7U7 411 aa10.69□□□□□ -0.7
ERCC3-209ENST00000494464 CHST4Q8NCG5 386 aa10.69□□□□□ -0.7
ERCC3-209ENST00000494464 RAB3CQ96E17 227 aa10.69□□□□□ -0.7
ERCC3-209ENST00000494464 MRPS24Q96EL2 167 aaKnown RBP10.69□□□□□ -0.7
ERCC3-209ENST00000494464 SELENOIQ9C0D9 397 aa10.69□□□□□ -0.7
ERCC3-209ENST00000494464 GHITMQ9H3K2 345 aa10.69□□□□□ -0.7
ERCC3-209ENST00000494464 BANF2Q9H503 90 aa10.69□□□□□ -0.7
ERCC3-209ENST00000494464 MCUBQ9NWR8 336 aa10.69□□□□□ -0.7
ERCC3-209ENST00000494464 ZNF221Q9UK13 617 aa10.69□□□□□ -0.7
ERCC3-209ENST00000494464 UBE2J1Q9Y385 318 aaPredicted RBP10.69□□□□□ -0.7
ERCC3-209ENST00000494464 RNF114Q9Y508 228 aa10.69□□□□□ -0.7
ERCC3-209ENST00000494464 TRAV6A0A075B6T7 132 aa10.68□□□□□ -0.7
ERCC3-209ENST00000494464 A0A1W2PP11 408 aa10.68□□□□□ -0.7
ERCC3-209ENST00000494464 MEX3AA1L020 520 aaKnown RBP10.68□□□□□ -0.7
ERCC3-209ENST00000494464 TMEM225BP0DP42 221 aa10.68□□□□□ -0.7
ERCC3-209ENST00000494464 SERPINA2P20848 420 aa10.68□□□□□ -0.7
ERCC3-209ENST00000494464 CBX5P45973 191 aa10.68□□□□□ -0.7
ERCC3-209ENST00000494464 RAB25P57735 213 aa10.68□□□□□ -0.7
ERCC3-209ENST00000494464 PROK1P58294 105 aa10.68□□□□□ -0.7
ERCC3-209ENST00000494464 MEF2DQ14814 521 aa10.68□□□□□ -0.7
ERCC3-209ENST00000494464 PLAC9Q5JTB6 97 aa10.68□□□□□ -0.7
ERCC3-209ENST00000494464 Q6P435 159 aa10.68□□□□□ -0.7
ERCC3-209ENST00000494464 LIAT1Q6ZQX7 453 aa10.68□□□□□ -0.7
ERCC3-209ENST00000494464 OR51T1Q8NGJ9 327 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms