RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 ZNF554Q86TJ5 538 aa9.39□□□□□ -0.91
CTSA-209ENST00000493522 LDLRAD3Q86YD5 345 aa9.39□□□□□ -0.91
CTSA-209ENST00000493522 OR10V1Q8NGI7 309 aa9.39□□□□□ -0.91
CTSA-209ENST00000493522 OR4P4Q8NGL7 312 aa9.39□□□□□ -0.91
CTSA-209ENST00000493522 IL1F10Q8WWZ1 152 aa9.39□□□□□ -0.91
CTSA-209ENST00000493522 AP3S1Q92572 193 aa9.39□□□□□ -0.91
CTSA-209ENST00000493522 ISOC1Q96CN7 298 aa9.39□□□□□ -0.91
CTSA-209ENST00000493522 COMMD3Q9UBI1 195 aa9.39□□□□□ -0.91
CTSA-209ENST00000493522 MGAT4AQ9UM21 535 aa9.39□□□□□ -0.91
CTSA-209ENST00000493522 KCNK7Q9Y2U2 307 aa9.39□□□□□ -0.91
CTSA-209ENST00000493522 AMMECR1Q9Y4X0 333 aaPredicted RBP9.39□□□□□ -0.91
CTSA-209ENST00000493522 TRAV18A0A075B6X5 111 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 TRBV6-6A0A0A6YYG2 114 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 A0A1W2PPE3 182 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 BTBD17A6NE02 478 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 H3BMQ9 156 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 IGHV4-59P01825 116 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 FCGR3AP08637 254 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 GSTP1P09211 210 aaKnown RBP9.38□□□□□ -0.91
CTSA-209ENST00000493522 SOX6P35712 828 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 GNG2P59768 71 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 GNMTQ14749 295 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 SLC9A3R2Q15599 337 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 SSX2Q16385 188 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 LRRC75BQ2VPJ9 315 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 CDNFQ49AH0 187 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 MINOS1Q5TGZ0 78 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 FAM53AQ6NSI3 398 aaPredicted RBP9.38□□□□□ -0.91
CTSA-209ENST00000493522 ZNF880Q6PDB4 577 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 TREML4Q6UXN2 200 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 IZUMO1Q8IYV9 350 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 BEND2Q8NDZ0 799 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 OR52M1Q8NGK5 317 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 NUDCD2Q8WVJ2 157 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 SSMEM1Q8WWF3 244 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 ACOT12Q8WYK0 555 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 GALMQ96C23 342 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 MMP28Q9H239 520 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 PRDM13Q9H4Q3 707 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 Q9N2K0 584 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 OR2S2Q9NQN1 319 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.38□□□□□ -0.91
CTSA-209ENST00000493522 DIABLOQ9NR28 239 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 PSG11Q9UQ72 335 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 HILPDAQ9Y5L2 63 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 MINOS1-NBL1R4GNA1 71 aa9.38□□□□□ -0.91
CTSA-209ENST00000493522 A0A0A6YYH2 397 aa9.37□□□□□ -0.91
CTSA-209ENST00000493522 A6NJ64 397 aa9.37□□□□□ -0.91
CTSA-209ENST00000493522 LEUTXA8MZ59 168 aa9.37□□□□□ -0.91
CTSA-209ENST00000493522 J3QR06 171 aa9.37□□□□□ -0.91
CTSA-209ENST00000493522 IGLV1-47P01700 117 aa9.37□□□□□ -0.91
CTSA-209ENST00000493522 EIF4EP06730 217 aaKnown RBP9.37□□□□□ -0.91
CTSA-209ENST00000493522 ZNF182P17025 639 aaPredicted RBP9.37□□□□□ -0.91
CTSA-209ENST00000493522 PPP1CCP36873 323 aaKnown RBP9.37□□□□□ -0.91
CTSA-209ENST00000493522 CEACAM3P40198 252 aa9.37□□□□□ -0.91
CTSA-209ENST00000493522 LOXL3P58215 753 aa9.37□□□□□ -0.91
CTSA-209ENST00000493522 DEFA6Q01524 100 aa9.37□□□□□ -0.91
CTSA-209ENST00000493522 TMEM69Q5SWH9 247 aa9.37□□□□□ -0.91
CTSA-209ENST00000493522 LDLRAD2Q5SZI1 272 aa9.37□□□□□ -0.91
CTSA-209ENST00000493522 HACD4Q5VWC8 232 aa9.37□□□□□ -0.91
CTSA-209ENST00000493522 MZT2AQ6P582 158 aa9.37□□□□□ -0.91
CTSA-209ENST00000493522 DYNAPQ8N1N2 210 aa9.37□□□□□ -0.91
CTSA-209ENST00000493522 DTX3Q8N9I9 347 aa9.37□□□□□ -0.91
CTSA-209ENST00000493522 OR52L2PQ8NGH6 319 aa9.37□□□□□ -0.91
CTSA-209ENST00000493522 OR10X1Q8NGY0 326 aa9.37□□□□□ -0.91
CTSA-209ENST00000493522 MAFIPQ8WZ33 124 aa9.37□□□□□ -0.91
CTSA-209ENST00000493522 TOMM40LQ969M1 308 aa9.37□□□□□ -0.91
CTSA-209ENST00000493522 CREB3L1Q96BA8 519 aa9.37□□□□□ -0.91
CTSA-209ENST00000493522 S100A16Q96FQ6 103 aaKnown RBP9.37□□□□□ -0.91
CTSA-209ENST00000493522 AJUBAQ96IF1 538 aa9.37□□□□□ -0.91
CTSA-209ENST00000493522 DPAGT1Q9H3H5 408 aa9.37□□□□□ -0.91
CTSA-209ENST00000493522 ABCB10Q9NRK6 738 aa9.37□□□□□ -0.91
CTSA-209ENST00000493522 DPM3Q9P2X0 92 aa9.37□□□□□ -0.91
CTSA-209ENST00000493522 ZNF230Q9UIE0 474 aaPredicted RBP9.37□□□□□ -0.91
CTSA-209ENST00000493522 JPT1Q9UK76 154 aa9.37□□□□□ -0.91
CTSA-209ENST00000493522 ELF5Q9UKW6 265 aaPredicted RBP9.37□□□□□ -0.91
CTSA-209ENST00000493522 CEPT1Q9Y6K0 416 aa9.37□□□□□ -0.91
CTSA-209ENST00000493522 POM121CA8CG34 1229 aa9.36□□□□□ -0.91
CTSA-209ENST00000493522 BUB1B-PAK6H3BSN5 160 aa9.36□□□□□ -0.91
CTSA-209ENST00000493522 H3BUX3 64 aa9.36□□□□□ -0.91
CTSA-209ENST00000493522 CLDN34H7C241 214 aa9.36□□□□□ -0.91
CTSA-209ENST00000493522 HSPA12AO43301 675 aa9.36□□□□□ -0.91
CTSA-209ENST00000493522 HPGDSO60760 199 aa9.36□□□□□ -0.91
CTSA-209ENST00000493522 RGS11O94810 467 aa9.36□□□□□ -0.91
CTSA-209ENST00000493522 RNASE1P07998 156 aaKnown RBP9.36□□□□□ -0.91
CTSA-209ENST00000493522 IL3RAP26951 378 aa9.36□□□□□ -0.91
CTSA-209ENST00000493522 MNDAP41218 407 aa9.36□□□□□ -0.91
CTSA-209ENST00000493522 KIR2DS4P43632 304 aa9.36□□□□□ -0.91
CTSA-209ENST00000493522 IER3P46695 156 aa9.36□□□□□ -0.91
CTSA-209ENST00000493522 KIR2DS1Q14954 304 aa9.36□□□□□ -0.91
CTSA-209ENST00000493522 PNLIPRP3Q17RR3 467 aa9.36□□□□□ -0.91
CTSA-209ENST00000493522 ZNF260Q3ZCT1 412 aa9.36□□□□□ -0.91
CTSA-209ENST00000493522 Q3ZCU0 254 aa9.36□□□□□ -0.91
CTSA-209ENST00000493522 TPTE2P1Q5T6R2 138 aa9.36□□□□□ -0.91
CTSA-209ENST00000493522 STEAP3Q658P3 488 aa9.36□□□□□ -0.91
CTSA-209ENST00000493522 TMEM86BQ8N661 226 aa9.36□□□□□ -0.91
CTSA-209ENST00000493522 RPEQ96AT9 228 aa9.36□□□□□ -0.91
CTSA-209ENST00000493522 MALSU1Q96EH3 234 aa9.36□□□□□ -0.91
CTSA-209ENST00000493522 SSX3Q99909 188 aa9.36□□□□□ -0.91
CTSA-209ENST00000493522 ABCG5Q9H222 651 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms