RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 C3orf84H3BNL1 204 aa9.08□□□□□ -0.96
COL6A3-213ENST00000493475 LANCL1O43813 399 aa9.08□□□□□ -0.96
COL6A3-213ENST00000493475 LIMS3P0CW19 117 aa9.08□□□□□ -0.96
COL6A3-213ENST00000493475 LIMS4P0CW20 117 aa9.08□□□□□ -0.96
COL6A3-213ENST00000493475 IGHV3-43DP0DP04 118 aa9.08□□□□□ -0.96
COL6A3-213ENST00000493475 LUMP51884 338 aaPredicted RBP9.08□□□□□ -0.96
COL6A3-213ENST00000493475 UTF1Q5T230 341 aa9.08□□□□□ -0.96
COL6A3-213ENST00000493475 C18orf65Q6ZTR6 163 aa9.08□□□□□ -0.96
COL6A3-213ENST00000493475 ZNF429Q86V71 674 aa9.08□□□□□ -0.96
COL6A3-213ENST00000493475 TMEM104Q8NE00 496 aa9.08□□□□□ -0.96
COL6A3-213ENST00000493475 OR11H1Q8NG94 326 aa9.08□□□□□ -0.96
COL6A3-213ENST00000493475 GHSRQ92847 366 aa9.08□□□□□ -0.96
COL6A3-213ENST00000493475 ST6GALNAC6Q969X2 333 aa9.08□□□□□ -0.96
COL6A3-213ENST00000493475 KCTD7Q96MP8 289 aa9.08□□□□□ -0.96
COL6A3-213ENST00000493475 SMPD3Q9NY59 655 aaPredicted RBP9.08□□□□□ -0.96
COL6A3-213ENST00000493475 GHRLQ9UBU3 117 aa9.08□□□□□ -0.96
COL6A3-213ENST00000493475 STEAP1Q9UHE8 339 aa9.08□□□□□ -0.96
COL6A3-213ENST00000493475 JPT1Q9UK76 154 aa9.08□□□□□ -0.96
COL6A3-213ENST00000493475 RNF150Q9ULK6 438 aa9.08□□□□□ -0.96
COL6A3-213ENST00000493475 PEX16Q9Y5Y5 336 aa9.08□□□□□ -0.96
COL6A3-213ENST00000493475 SMAD5-AS1Q9Y6J3 95 aa9.08□□□□□ -0.96
COL6A3-213ENST00000493475 COL7A1Q02388 2944 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 C12orf77C9JDV5 145 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 GPX5O75715 221 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 CRTAPO75718 401 aaPredicted RBP9.07□□□□□ -0.96
COL6A3-213ENST00000493475 HBZP02008 142 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 FSTP19883 344 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 FUT3P21217 361 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 PSMB8P28062 276 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 CAPGP40121 348 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 ZNF616Q08AN1 781 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 DEFB136Q30KP8 78 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 TTC23Q5W5X9 447 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 GLIPR1L1Q6UWM5 242 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 SVOPQ8N4V2 548 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 FAM71E2Q8N5Q1 922 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 TCTEX1D1Q8N7M0 179 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 OR2AK2Q8NG84 335 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 OR10V1Q8NGI7 309 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 OR1N2Q8NGR9 330 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 OR4K15Q8NH41 348 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 MUL1Q969V5 352 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 GALMQ96C23 342 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 TMEM80Q96HE8 168 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 ABHD14AQ9BUJ0 271 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 SELENOIQ9C0D9 397 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 OR51J1Q9H342 316 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 TAF9BQ9HBM6 251 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 C8orf4Q9NR00 106 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 PARP11Q9NR21 331 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 FAM53CQ9NYF3 392 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 RCC2Q9P258 522 aaKnown RBP9.07□□□□□ -0.96
COL6A3-213ENST00000493475 AASSQ9UDR5 926 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 DIMT1Q9UNQ2 313 aaKnown RBP9.07□□□□□ -0.96
COL6A3-213ENST00000493475 DNAH3Q8TD57 4116 aa9.07□□□□□ -0.96
COL6A3-213ENST00000493475 ERICH4A6NGS2 130 aa9.06□□□□□ -0.96
COL6A3-213ENST00000493475 H3BNX3 289 aa9.06□□□□□ -0.96
COL6A3-213ENST00000493475 ARPC1BO15143 372 aaKnown RBP9.06□□□□□ -0.96
COL6A3-213ENST00000493475 OGG1O15527 345 aa9.06□□□□□ -0.96
COL6A3-213ENST00000493475 HLA-DRB1P01911 266 aa9.06□□□□□ -0.96
COL6A3-213ENST00000493475 UBBP0CG47 229 aa9.06□□□□□ -0.96
COL6A3-213ENST00000493475 SLC2A2P11168 524 aaPredicted RBP9.06□□□□□ -0.96
COL6A3-213ENST00000493475 MYF6P23409 242 aa9.06□□□□□ -0.96
COL6A3-213ENST00000493475 CHATP28329 748 aa9.06□□□□□ -0.96
COL6A3-213ENST00000493475 RANBP1P43487 201 aa9.06□□□□□ -0.96
COL6A3-213ENST00000493475 ETV1P50549 477 aa9.06□□□□□ -0.96
COL6A3-213ENST00000493475 HTD2P86397 168 aa9.06□□□□□ -0.96
COL6A3-213ENST00000493475 TMEM267Q0VDI3 215 aaPredicted RBP9.06□□□□□ -0.96
COL6A3-213ENST00000493475 LSAMPQ13449 338 aa9.06□□□□□ -0.96
COL6A3-213ENST00000493475 DOC2BQ14184 412 aa9.06□□□□□ -0.96
COL6A3-213ENST00000493475 PLGLAQ15195 96 aa9.06□□□□□ -0.96
COL6A3-213ENST00000493475 OR2G6Q5TZ20 316 aa9.06□□□□□ -0.96
COL6A3-213ENST00000493475 PYHIN1Q6K0P9 492 aa9.06□□□□□ -0.96
COL6A3-213ENST00000493475 LIN54Q6MZP7 749 aa9.06□□□□□ -0.96
COL6A3-213ENST00000493475 PQLC1Q8N2U9 271 aa9.06□□□□□ -0.96
COL6A3-213ENST00000493475 UBALD1Q8TB05 177 aa9.06□□□□□ -0.96
COL6A3-213ENST00000493475 RGP1Q92546 391 aaPredicted RBP9.06□□□□□ -0.96
COL6A3-213ENST00000493475 NEDD4LQ96PU5 975 aa9.06□□□□□ -0.96
COL6A3-213ENST00000493475 PRR25Q96S07 402 aa9.06□□□□□ -0.96
COL6A3-213ENST00000493475 UQCC2Q9BRT2 126 aa9.06□□□□□ -0.96
COL6A3-213ENST00000493475 ZMAT4Q9H898 229 aa9.06□□□□□ -0.96
COL6A3-213ENST00000493475 PLSCR3Q9NRY6 295 aa9.06□□□□□ -0.96
COL6A3-213ENST00000493475 TRAV41A0A0B4J266 112 aa9.05□□□□□ -0.96
COL6A3-213ENST00000493475 TRBV5-5A0A0J9YX44 114 aa9.05□□□□□ -0.96
COL6A3-213ENST00000493475 LINC01548A6NM66 108 aa9.05□□□□□ -0.96
COL6A3-213ENST00000493475 MYL12BO14950 172 aa9.05□□□□□ -0.96
COL6A3-213ENST00000493475 NBR2O15453 112 aa9.05□□□□□ -0.96
COL6A3-213ENST00000493475 PDCD6O75340 191 aa9.05□□□□□ -0.96
COL6A3-213ENST00000493475 BAG2O95816 211 aa9.05□□□□□ -0.96
COL6A3-213ENST00000493475 MGMTP16455 207 aa9.05□□□□□ -0.96
COL6A3-213ENST00000493475 IGFBP3P17936 291 aaPredicted RBP9.05□□□□□ -0.96
COL6A3-213ENST00000493475 ACTBP60709 375 aa9.05□□□□□ -0.96
COL6A3-213ENST00000493475 RUNX1Q01196 453 aa9.05□□□□□ -0.96
COL6A3-213ENST00000493475 FHL3Q13643 280 aa9.05□□□□□ -0.96
COL6A3-213ENST00000493475 CT45A1Q5HYN5 189 aa9.05□□□□□ -0.96
COL6A3-213ENST00000493475 OR6Q1Q8NGQ2 317 aa9.05□□□□□ -0.96
COL6A3-213ENST00000493475 CT45A3Q8NHU0 189 aa9.05□□□□□ -0.96
COL6A3-213ENST00000493475 ABHD5Q8WTS1 349 aa9.05□□□□□ -0.96
COL6A3-213ENST00000493475 SLC29A1Q99808 456 aa9.05□□□□□ -0.96
COL6A3-213ENST00000493475 HSPB9Q9BQS6 159 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms