RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 ZNF596Q8TC21 504 aa9.45□□□□□ -0.9
LSM2-214ENST00000493387 FAM216AQ8WUB2 273 aa9.45□□□□□ -0.9
LSM2-214ENST00000493387 MAFIPQ8WZ33 124 aa9.45□□□□□ -0.9
LSM2-214ENST00000493387 TNFRSF14Q92956 283 aa9.45□□□□□ -0.9
LSM2-214ENST00000493387 CREB3L1Q96BA8 519 aa9.45□□□□□ -0.9
LSM2-214ENST00000493387 YPEL2Q96QA6 119 aa9.45□□□□□ -0.9
LSM2-214ENST00000493387 THAP7Q9BT49 309 aaPredicted RBP9.45□□□□□ -0.9
LSM2-214ENST00000493387 SUCNR1Q9BXA5 334 aa9.45□□□□□ -0.9
LSM2-214ENST00000493387 CLEC7AQ9BXN2 247 aa9.45□□□□□ -0.9
LSM2-214ENST00000493387 SRRQ9GZT4 340 aa9.45□□□□□ -0.9
LSM2-214ENST00000493387 NECAP2Q9NVZ3 263 aa9.45□□□□□ -0.9
LSM2-214ENST00000493387 KLK11Q9UBX7 282 aa9.45□□□□□ -0.9
LSM2-214ENST00000493387 SLC23A1Q9UHI7 598 aa9.45□□□□□ -0.9
LSM2-214ENST00000493387 ACANP16112 2415 aa9.45□□□□□ -0.9
LSM2-214ENST00000493387 FLNAP21333 2647 aaKnown RBP9.44□□□□□ -0.9
LSM2-214ENST00000493387 CSMD2Q7Z408 3487 aa9.44□□□□□ -0.9
LSM2-214ENST00000493387 TRBV6-7A0A0A0MS04 114 aa9.44□□□□□ -0.9
LSM2-214ENST00000493387 ZNF736B4DX44 427 aaPredicted RBP9.44□□□□□ -0.9
LSM2-214ENST00000493387 ITGB1BP1O14713 200 aa9.44□□□□□ -0.9
LSM2-214ENST00000493387 HOXB4P17483 251 aaPredicted RBP9.44□□□□□ -0.9
LSM2-214ENST00000493387 CD40LGP29965 261 aa9.44□□□□□ -0.9
LSM2-214ENST00000493387 GDNFP39905 211 aa9.44□□□□□ -0.9
LSM2-214ENST00000493387 TAS2R19P59542 299 aa9.44□□□□□ -0.9
LSM2-214ENST00000493387 AP3S2P59780 193 aa9.44□□□□□ -0.9
LSM2-214ENST00000493387 SCGB2A2Q13296 93 aa9.44□□□□□ -0.9
LSM2-214ENST00000493387 CDK10Q15131 360 aa9.44□□□□□ -0.9
LSM2-214ENST00000493387 MORN2Q502X0 79 aa9.44□□□□□ -0.9
LSM2-214ENST00000493387 RNASE12Q5GAN4 147 aaKnown RBP9.44□□□□□ -0.9
LSM2-214ENST00000493387 MFSD4AQ8N468 514 aa9.44□□□□□ -0.9
LSM2-214ENST00000493387 PNKDQ8N490 385 aa9.44□□□□□ -0.9
LSM2-214ENST00000493387 UBALD1Q8TB05 177 aa9.44□□□□□ -0.9
LSM2-214ENST00000493387 EDARADDQ8WWZ3 215 aa9.44□□□□□ -0.9
LSM2-214ENST00000493387 DEDD2Q8WXF8 326 aa9.44□□□□□ -0.9
LSM2-214ENST00000493387 SNAPC3Q92966 411 aa9.44□□□□□ -0.9
LSM2-214ENST00000493387 LHX4Q969G2 390 aa9.44□□□□□ -0.9
LSM2-214ENST00000493387 GINS4Q9BRT9 223 aa9.44□□□□□ -0.9
LSM2-214ENST00000493387 CCDC32Q9BV29 185 aa9.44□□□□□ -0.9
LSM2-214ENST00000493387 TOLLIPQ9H0E2 274 aa9.44□□□□□ -0.9
LSM2-214ENST00000493387 IGKV1D-8A0A087WSZ0 117 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 IGHV2-26A0A0B4J1V2 119 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 IGHV1-69DA0A0B4J2H0 117 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 IGKV1-6A0A0C4DH72 117 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 CENPVL3A0A0U1RRI6 287 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 RNASEK-C17orf49H0YIS7 233 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 BET1O15155 118 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 AVPP01185 164 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 IGHV1-69P01742 117 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 OR5H8P0DN80 308 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 COX7A1P24310 79 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 HLA-DMAP28067 261 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 SRP14P37108 136 aaKnown RBP9.43□□□□□ -0.9
LSM2-214ENST00000493387 CEACAM6P40199 344 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 INPP1P49441 399 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 RAB7AP51149 207 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 PPP5CP53041 499 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 LGALS4P56470 323 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 LSAMPQ13449 338 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 MEF2DQ14814 521 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 HERPUD1Q15011 391 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 MIDNQ504T8 468 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 IGSF11Q5DX21 431 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 FAM120AOSQ5T036 256 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 TRIQKQ629K1 86 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 ZNF626Q68DY1 528 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 HCP5Q6MZN7 132 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 C1orf229Q6ZS94 237 aaPredicted RBP9.43□□□□□ -0.9
LSM2-214ENST00000493387 LYSMD2Q8IV50 215 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 LINC00311Q8N616 119 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 BEND2Q8NDZ0 799 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 OR52L2PQ8NGH6 319 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 SMR3AQ99954 134 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 GHITMQ9H3K2 345 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 ZNF69Q9UC07 566 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 NUP50Q9UKX7 468 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 PSG11Q9UQ72 335 aa9.43□□□□□ -0.9
LSM2-214ENST00000493387 AMMECR1Q9Y4X0 333 aaPredicted RBP9.43□□□□□ -0.9
LSM2-214ENST00000493387 IGHV3-43A0A0B4J1X8 118 aa9.42□□□□□ -0.9
LSM2-214ENST00000493387 TRAV40A0A0B4J280 105 aa9.42□□□□□ -0.9
LSM2-214ENST00000493387 J3QR06 171 aa9.42□□□□□ -0.9
LSM2-214ENST00000493387 NPFFO15130 113 aa9.42□□□□□ -0.9
LSM2-214ENST00000493387 FSHBP01225 129 aa9.42□□□□□ -0.9
LSM2-214ENST00000493387 CD74P04233 296 aa9.42□□□□□ -0.9
LSM2-214ENST00000493387 IFNA6P05013 189 aa9.42□□□□□ -0.9
LSM2-214ENST00000493387 ARG1P05089 322 aa9.42□□□□□ -0.9
LSM2-214ENST00000493387 FCER2P06734 321 aa9.42□□□□□ -0.9
LSM2-214ENST00000493387 IGHV3-43DP0DP04 118 aa9.42□□□□□ -0.9
LSM2-214ENST00000493387 IL3RAP26951 378 aa9.42□□□□□ -0.9
LSM2-214ENST00000493387 HRH1P35367 487 aa9.42□□□□□ -0.9
LSM2-214ENST00000493387 FAUP35544 74 aaKnown RBP9.42□□□□□ -0.9
LSM2-214ENST00000493387 PPP1CCP36873 323 aaKnown RBP9.42□□□□□ -0.9
LSM2-214ENST00000493387 DYRK1AQ13627 763 aa9.42□□□□□ -0.9
LSM2-214ENST00000493387 RNASE10Q5GAN6 216 aaKnown RBP9.42□□□□□ -0.9
LSM2-214ENST00000493387 VAX1Q5SQQ9 334 aa9.42□□□□□ -0.9
LSM2-214ENST00000493387 MINOS1Q5TGZ0 78 aa9.42□□□□□ -0.9
LSM2-214ENST00000493387 OVCH2Q7RTZ1 564 aa9.42□□□□□ -0.9
LSM2-214ENST00000493387 TMEM17Q86X19 198 aa9.42□□□□□ -0.9
LSM2-214ENST00000493387 H1FOOQ8IZA3 346 aaPredicted RBP9.42□□□□□ -0.9
LSM2-214ENST00000493387 OR2AK2Q8NG84 335 aa9.42□□□□□ -0.9
LSM2-214ENST00000493387 OR10V1Q8NGI7 309 aa9.42□□□□□ -0.9
LSM2-214ENST00000493387 GIMAP1Q8WWP7 306 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms