RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 RTL6Q6ICC9 239 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 Q6ZPA2 131 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 COLCA1Q6ZS62 124 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 ZFHX4Q86UP3 3567 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 KRTAP1-3Q8IUG1 177 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 INTS1Q8N201 2190 aaKnown RBP5.97□□□□□ -1.45
HERC4-211ENST00000492996 RTN4IP1Q8WWV3 396 aaPredicted RBP5.97□□□□□ -1.45
HERC4-211ENST00000492996 APOBEC3DQ96AK3 386 aaPredicted RBP5.97□□□□□ -1.45
HERC4-211ENST00000492996 HIST1H2AAQ96QV6 131 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 LINC00470Q9BZP3 86 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 HEATR1Q9H583 2144 aaKnown RBP5.97□□□□□ -1.45
HERC4-211ENST00000492996 ZNF286AQ9HBT8 521 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 ERRFI1Q9UJM3 462 aaPredicted RBP5.97□□□□□ -1.45
HERC4-211ENST00000492996 HSF4Q9ULV5 492 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 CARHSP1Q9Y2V2 147 aaKnown RBP5.97□□□□□ -1.45
HERC4-211ENST00000492996 SMCO3A2RU48 225 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 CD300LBA8K4G0 201 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 M0R143 59 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 OR5AC1P0C628 307 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 SFTA3P0C7M3 94 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 HOXA5P20719 270 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 APLNRP35414 380 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 LY6DQ14210 128 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 NSUN5P2Q63ZY6 315 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 MEX3BQ6ZN04 569 aaKnown RBP5.97□□□□□ -1.45
HERC4-211ENST00000492996 P4HA3Q7Z4N8 544 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 ZDHHC23Q8IYP9 409 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 RDH5Q92781 318 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 SPSB4Q96A44 273 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 POM121L2Q96KW2 1035 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 C1orf123Q9NWV4 160 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 MTCH1Q9NZJ7 389 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 LAMA5O15230 3695 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 PCNX1Q96RV3 2341 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 TMEM210A6NLX4 147 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 HS3ST1O14792 307 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 CA11O75493 328 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 LYZL6O75951 148 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 CTSDP07339 412 aaPredicted RBP5.97□□□□□ -1.45
HERC4-211ENST00000492996 CELA3BP08861 270 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 AADACP22760 399 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 CA6P23280 308 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 WNT5AP41221 380 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 IDH3GP51553 393 aaPredicted RBP5.97□□□□□ -1.45
HERC4-211ENST00000492996 HERV-K104P61576 105 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 NKX6-1P78426 367 aaPredicted RBP5.97□□□□□ -1.45
HERC4-211ENST00000492996 RNPS1Q15287 305 aaKnown RBP5.97□□□□□ -1.45
HERC4-211ENST00000492996 C1orf185Q5T7R7 199 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 GGNBP1Q5YKI7 109 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 ASCL4Q6XD76 172 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 LYZL2Q7Z4W2 148 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 MDP1Q86V88 176 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 PIK3IP1Q96FE7 263 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 WDYHV1Q96HA8 205 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 NDUFAF3Q9BU61 184 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 GAB2Q9UQC2 676 aa5.97□□□□□ -1.45
HERC4-211ENST00000492996 TANC2Q9HCD6 1990 aa5.96□□□□□ -1.45
HERC4-211ENST00000492996 NBEAQ8NFP9 2946 aa5.96□□□□□ -1.45
HERC4-211ENST00000492996 TRAV39A0A0B4J263 110 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 ZNF724A8MTY0 619 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 SLC33A1O00400 549 aaPredicted RBP5.96□□□□□ -1.46
HERC4-211ENST00000492996 IFNA21P01568 189 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 DTYMKP23919 212 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 CD80P33681 288 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 SPIN3Q5JUX0 258 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 PRSS54Q6PEW0 395 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 MYPOPQ86VE0 399 aaPredicted RBP5.96□□□□□ -1.46
HERC4-211ENST00000492996 POC1AQ8NBT0 407 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 UBALD1Q8TB05 177 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 SECTM1Q8WVN6 248 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 AKR1E2Q96JD6 320 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 TAAR6Q96RI8 345 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 BARX1Q9HBU1 254 aaPredicted RBP5.96□□□□□ -1.46
HERC4-211ENST00000492996 SLC2A9Q9NRM0 540 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 OR14J1Q9UGF5 321 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 PIEZO2Q9H5I5 2752 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 CRYM-AS1A6NIL9 109 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 TRAPPC2LH3BP13 241 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 RPL36A-HNRNPH2H7BZ11 118 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 FBXO24O75426 580 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 SCTP09683 121 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 SELEP16581 610 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 ARR3P36575 388 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 BAP18Q8IXM2 172 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 MKXQ8IYA7 352 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 CNEP1R1Q8N9A8 125 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 CD300LFQ8TDQ1 290 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 VPS25Q9BRG1 176 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 DOK5Q9P104 306 aa5.96□□□□□ -1.46
HERC4-211ENST00000492996 PHF1O43189 567 aaPredicted RBP5.95□□□□□ -1.46
HERC4-211ENST00000492996 SIAH2O43255 324 aa5.95□□□□□ -1.46
HERC4-211ENST00000492996 RHBDL1O75783 438 aa5.95□□□□□ -1.46
HERC4-211ENST00000492996 TPT1P13693 172 aaKnown RBP5.95□□□□□ -1.46
HERC4-211ENST00000492996 CHRNB4P30926 498 aa5.95□□□□□ -1.46
HERC4-211ENST00000492996 ERVS71-1P61550 626 aa5.95□□□□□ -1.46
HERC4-211ENST00000492996 CEACAM21Q3KPI0 293 aa5.95□□□□□ -1.46
HERC4-211ENST00000492996 NRN1LQ496H8 165 aa5.95□□□□□ -1.46
HERC4-211ENST00000492996 ARSJQ5FYB0 599 aaPredicted RBP5.95□□□□□ -1.46
HERC4-211ENST00000492996 FBXW9Q5XUX1 488 aa5.95□□□□□ -1.46
HERC4-211ENST00000492996 RPL7L1Q6DKI1 246 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms