RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 ZNF404Q494X3 552 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 SLC36A2Q495M3 483 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 LRRC37A5PQ49AS3 106 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 HSD17B12Q53GQ0 312 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 OR10K2Q6IF99 312 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 SFXN4Q6P4A7 337 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 UQCC3Q6UW78 93 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 ZNF562Q6V9R5 426 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 FBXW12Q6X9E4 464 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 Q6ZSV7 163 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 UTS2BQ765I0 119 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 BHLHA15Q7RTS1 189 aaPredicted RBP3.71□□□□□ -1.82
CLIP4-211ENST00000491701 FAM89BQ8N5H3 189 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 ZNF283Q8N7M2 679 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 CNEP1R1Q8N9A8 125 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 POC1AQ8NBT0 407 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 TMEM104Q8NE00 496 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 OR1M1Q8NGA1 313 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 OR4M1Q8NGD0 313 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 OR13C3Q8NGS6 347 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 MCFD2Q8NI22 146 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 PHLDA1Q8WV24 401 aaPredicted RBP3.71□□□□□ -1.82
CLIP4-211ENST00000491701 HPSE2Q8WWQ2 592 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 NEUROG1Q92886 237 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 S100PBPQ96BU1 408 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 UPRTQ96BW1 309 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 SPACA5Q96QH8 159 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 UQCC2Q9BRT2 126 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 SFXN3Q9BWM7 321 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 SRRQ9GZT4 340 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 MYEF2Q9P2K5 600 aaKnown RBP3.71□□□□□ -1.82
CLIP4-211ENST00000491701 HHLA2Q9UM44 414 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 PROCRQ9UNN8 238 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 RNF24Q9Y225 148 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 POLDIP2Q9Y2S7 368 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 AMDHD2Q9Y303 409 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 NAV3Q8IVL0 2385 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 MAP1AP78559 2803 aaPredicted RBP3.71□□□□□ -1.82
CLIP4-211ENST00000491701 DOCK11Q5JSL3 2073 aa3.71□□□□□ -1.82
CLIP4-211ENST00000491701 AKAP6Q13023 2319 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 PQLC2LA1A4F0 135 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 CCDC160A6NGH7 325 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 SERPINE3A8MV23 424 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 SLC17A2O00624 439 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 TNFRSF13BO14836 293 aaPredicted RBP3.7□□□□□ -1.82
CLIP4-211ENST00000491701 CRTAPO75718 401 aaPredicted RBP3.7□□□□□ -1.82
CLIP4-211ENST00000491701 NXPH2O95156 264 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 CST4P01036 141 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 IGF1P05019 195 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 FAM106CPP0CH98 169 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 CD79AP11912 226 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 RAB3BP20337 219 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 S100A5P33763 92 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 RFX2P48378 723 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 RORCP51449 518 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 IDH3GP51553 393 aaPredicted RBP3.7□□□□□ -1.82
CLIP4-211ENST00000491701 SEC61A1P61619 476 aaKnown RBP3.7□□□□□ -1.82
CLIP4-211ENST00000491701 EWSR1Q01844 656 aaKnown RBP eCLIP3.7□□□□□ -1.82
CLIP4-211ENST00000491701 COL10A1Q03692 680 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 DYNC1I2Q13409 638 aaKnown RBP3.7□□□□□ -1.82
CLIP4-211ENST00000491701 DGUOKQ16854 277 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 TIMM23BQ5SRD1 257 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 HES5Q5TA89 166 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 BCL2L15Q5TBC7 163 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 UNQ6126/PRO20091Q6UXV3 157 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 CHMP1BQ7LBR1 199 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 CALHM1Q8IU99 346 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 CENPSQ8N2Z9 138 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 ZNF676Q8N7Q3 588 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 KBTBD8Q8NFY9 601 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 OR51D1Q8NGF3 324 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 SLC25A40Q8TBP6 338 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 ITLN2Q8WWU7 325 aaPredicted RBP3.7□□□□□ -1.82
CLIP4-211ENST00000491701 TMEM106AQ96A25 262 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 CMBLQ96DG6 245 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 REEP6Q96HR9 211 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 LURAP1Q96LR2 239 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 TMEM204Q9BSN7 226 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 DCTN5Q9BTE1 182 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 LPAR5Q9H1C0 372 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 ABCG5Q9H222 651 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 CXXC4Q9H2H0 198 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 RANBP3Q9H6Z4 567 aaPredicted RBP3.7□□□□□ -1.82
CLIP4-211ENST00000491701 VCX3AQ9NNX9 186 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 MSRB1Q9NZV6 116 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 IL36RNQ9UBH0 155 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 GHRLQ9UBU3 117 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 SPATA2Q9UM82 520 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 V9GY05 133 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 ANKHD1Q8IWZ3 2542 aaKnown RBP3.7□□□□□ -1.82
CLIP4-211ENST00000491701 IGLV3-9A0A075B6K5 115 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 MEIOCA2RUB1 952 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 C5orf49A4QMS7 147 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 NKX2-6A6NCS4 301 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 DHRS7CA6NNS2 312 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 CD300LBA8K4G0 201 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 DEFB108AA8MXU0 73 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 SHISA9B4DS77 424 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 E7EQL1 145 aa3.7□□□□□ -1.82
CLIP4-211ENST00000491701 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms