RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 CAPGP40121 348 aa6.96□□□□□ -1.3
HDAC3-211ENST00000491581 ARHGDIBP52566 201 aa6.96□□□□□ -1.3
HDAC3-211ENST00000491581 NDPQ00604 133 aa6.96□□□□□ -1.3
HDAC3-211ENST00000491581 CFHR3Q02985 330 aa6.96□□□□□ -1.3
HDAC3-211ENST00000491581 EGFEM1PQ0D2K5 195 aa6.96□□□□□ -1.3
HDAC3-211ENST00000491581 UNC119Q13432 240 aa6.96□□□□□ -1.3
HDAC3-211ENST00000491581 MORN2Q502X0 79 aa6.96□□□□□ -1.3
HDAC3-211ENST00000491581 YIF1BQ5BJH7 314 aa6.96□□□□□ -1.3
HDAC3-211ENST00000491581 SLC25A48Q6ZT89 311 aaKnown RBP6.96□□□□□ -1.3
HDAC3-211ENST00000491581 LRRTM1Q86UE6 522 aa6.96□□□□□ -1.3
HDAC3-211ENST00000491581 TGIF2LXQ8IUE1 241 aa6.96□□□□□ -1.3
HDAC3-211ENST00000491581 ZNF695Q8IW36 515 aa6.96□□□□□ -1.3
HDAC3-211ENST00000491581 IZUMO1Q8IYV9 350 aa6.96□□□□□ -1.3
HDAC3-211ENST00000491581 FAM71E2Q8N5Q1 922 aa6.96□□□□□ -1.3
HDAC3-211ENST00000491581 NANOGP1Q8N7R0 232 aa6.96□□□□□ -1.3
HDAC3-211ENST00000491581 CHPT1Q8WUD6 406 aa6.96□□□□□ -1.3
HDAC3-211ENST00000491581 NRG4Q8WWG1 115 aa6.96□□□□□ -1.3
HDAC3-211ENST00000491581 RCC1LQ96I51 464 aaKnown RBP6.96□□□□□ -1.3
HDAC3-211ENST00000491581 ASCL2Q99929 193 aa6.96□□□□□ -1.3
HDAC3-211ENST00000491581 FKBP14Q9NWM8 211 aa6.96□□□□□ -1.3
HDAC3-211ENST00000491581 ZNF107Q9UII5 783 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-211ENST00000491581 PTGES3LE9PB15 166 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 M0QZK8 103 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 ATP6V0E1O15342 81 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 FGF16O43320 207 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 ORC5O43913 435 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 MOSP00540 346 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 GZMHP20718 246 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 KCNJ3P48549 501 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 WNT4P56705 351 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 CLDN12P56749 244 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 GNB1P62873 340 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 DEFA5Q01523 94 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 GABPB1Q06547 395 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-211ENST00000491581 LSAMPQ13449 338 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 GPR50Q13585 617 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 KIAA0141Q14154 515 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-211ENST00000491581 P2RY14Q15391 338 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 RPL39P5Q59GN2 51 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 C6orf141Q5SZD1 244 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 OGFRL1Q5TC84 451 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-211ENST00000491581 GAPTQ8N292 157 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 STX19Q8N4C7 294 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 LINC00311Q8N616 119 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 DTX3Q8N9I9 347 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 OR10A7Q8NGE5 316 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 OR2T10Q8NGZ9 312 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 SETD6Q8TBK2 473 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 FBLIM1Q8WUP2 373 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 TMEM203Q969S6 136 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 CPNE2Q96FN4 548 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-211ENST00000491581 OR2S2Q9NQN1 319 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 LIN7CQ9NUP9 197 aaKnown RBP6.95□□□□□ -1.3
HDAC3-211ENST00000491581 OR1A1Q9P1Q5 309 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 GAB2Q9UQC2 676 aa6.95□□□□□ -1.3
HDAC3-211ENST00000491581 KMT2CQ8NEZ4 4911 aaKnown RBP6.94□□□□□ -1.3
HDAC3-211ENST00000491581 SAA2-SAA4A0A096LPE2 208 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 EFCAB10A6NFE3 127 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 H0YHG0 523 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 FCN1O00602 326 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 MYL12BO14950 172 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 SOCS1O15524 211 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 SOX15O60248 233 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 SC5DO75845 299 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 SAA2P0DJI9 122 aaPredicted RBP6.94□□□□□ -1.3
HDAC3-211ENST00000491581 CHATP28329 748 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 BLVRBP30043 206 aaPredicted RBP6.94□□□□□ -1.3
HDAC3-211ENST00000491581 RPS25P62851 125 aaKnown RBP6.94□□□□□ -1.3
HDAC3-211ENST00000491581 MMDQ15546 238 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 ACSM3Q53FZ2 586 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 RBM48Q5RL73 367 aaKnown RBP6.94□□□□□ -1.3
HDAC3-211ENST00000491581 VAX1Q5SQQ9 334 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 TTC23Q5W5X9 447 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 UNQ9370/PRO34162Q6UXP9 181 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 HAPLN4Q86UW8 402 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 FOXRED2Q8IWF2 684 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 C8orf59Q8N0T1 100 aaPredicted RBP6.94□□□□□ -1.3
HDAC3-211ENST00000491581 DRAXINQ8NBI3 349 aaPredicted RBP6.94□□□□□ -1.3
HDAC3-211ENST00000491581 OR52M1Q8NGK5 317 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 IL1F10Q8WWZ1 152 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 ABHD14BQ96IU4 210 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 KCTD7Q96MP8 289 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 RASL11BQ9BPW5 248 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 NABP2Q9BQ15 211 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 ZNF251Q9BRH9 671 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 FAM103A1Q9BTL3 118 aaKnown RBP6.94□□□□□ -1.3
HDAC3-211ENST00000491581 ANKRD60Q9BZ19 345 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 IFI27L2Q9H2X8 130 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 PARP11Q9NR21 331 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 PCDHB16Q9NRJ7 776 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 MBNL3Q9NUK0 354 aaKnown RBP6.94□□□□□ -1.3
HDAC3-211ENST00000491581 CHCHD3Q9NX63 227 aaKnown RBP6.94□□□□□ -1.3
HDAC3-211ENST00000491581 GAR1Q9NY12 217 aaKnown RBP6.94□□□□□ -1.3
HDAC3-211ENST00000491581 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.94□□□□□ -1.3
HDAC3-211ENST00000491581 CKLFQ9UBR5 152 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 SCOCQ9UIL1 159 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 LSM2Q9Y333 95 aaKnown RBP6.94□□□□□ -1.3
HDAC3-211ENST00000491581 A3GALT2U3KPV4 340 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 RYR3Q15413 4870 aa6.94□□□□□ -1.3
HDAC3-211ENST00000491581 IGHV7-81A0A0B4J1V7 117 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms