RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 MKXQ8IYA7 352 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF100Q8IYN0 542 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 SAXO1Q8IYX7 474 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 PRR22Q8IZ63 422 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 CMTM1Q8IZ96 169 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 H1FOOQ8IZA3 346 aaPredicted RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 SELENOHQ8IZQ5 122 aaKnown RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 OSR2Q8N2R0 312 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 SLC25A45Q8N413 288 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 TMEM252Q8N6L7 170 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 SUMF2Q8NBJ7 301 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF114Q8NC26 417 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 TMEM104Q8NE00 496 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 OR2M3Q8NG83 312 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 OR8B12Q8NGG6 310 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 OR5A2Q8NGI9 324 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 OR10S1Q8NGN2 331 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 OR13C9Q8NGT0 318 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 OR2G3Q8NGZ4 309 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 OR51F2Q8NH61 342 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 OR1L3Q8NH93 324 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 M1APQ8TC57 530 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 SLC22A8Q8TCC7 542 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 SCGB1C1Q8TD33 95 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 RNASEH2CQ8TDP1 164 aaKnown RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 HPSE2Q8WWQ2 592 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 RTN4IP1Q8WWV3 396 aaPredicted RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 MAFIPQ8WZ33 124 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 MR1Q95460 341 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 TSLPQ969D9 159 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 IL22RA2Q969J5 263 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 HIST1H2BAQ96A08 127 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 PINX1Q96BK5 328 aaKnown RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF501Q96CX3 271 aaPredicted RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 RAB39BQ96DA2 213 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 CMBLQ96DG6 245 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 BORCS8Q96FH0 119 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 BTF3L4Q96K17 158 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 FOXN4Q96NZ1 517 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 IP6K3Q96PC2 410 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 GAL3ST4Q96RP7 486 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 RAB40CQ96S21 281 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 CLCC1Q96S66 551 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 SPIN2AQ99865 258 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 SPIN2BQ9BPZ2 258 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF2Q9BSG1 426 aaPredicted RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 NICN1Q9BSH3 213 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 RBM24Q9BX46 236 aaKnown RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 DEFB126Q9BYW3 111 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 CHST5Q9GZS9 411 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 TCEAL2Q9H3H9 227 aaPredicted RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 PLK3Q9H4B4 646 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 OPA3Q9H6K4 179 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 NAA60Q9H7X0 242 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 FN3KRPQ9HA64 309 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 ELL3Q9HB65 397 aaPredicted RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF286AQ9HBT8 521 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 FGF21Q9NSA1 209 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 C19orf12Q9NSK7 152 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 SLC39A9Q9NUM3 307 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 SOHLH2Q9NX45 425 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 TREM2Q9NZC2 230 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 IL36GQ9NZH8 169 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 KIAA1456Q9P272 454 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 B3GAT1Q9P2W7 334 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 C19orf25Q9UFG5 118 aaPredicted RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 MIOXQ9UGB7 285 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 VAX2Q9UIW0 290 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 CD207Q9UJ71 328 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 PITPNC1Q9UKF7 332 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 PIGLQ9Y2B2 252 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 MMP24Q9Y5R2 645 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 LHFPL6Q9Y693 200 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 PIAS3Q9Y6X2 628 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 COL4A2P08572 1712 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 ESPL1Q14674 2120 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 KIAA2026Q5HYC2 2103 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 HEATR1Q9H583 2144 aaKnown RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 GON4LQ3T8J9 2241 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 KNL1Q8NG31 2342 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 KMT2EQ8IZD2 1858 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 TRBV24-1A0A075B6N3 115 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 NSG1A0A0A6YYJ2 146 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 IGKV1D-43A0A0B4J1Z2 117 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 KIR2DS1A0A191URI9 304 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 TCRBV21S2A2A0A5A6 115 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 OR5H15A6NDH6 313 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 OR6C6A6NF89 314 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 FAM24AA6NFZ4 105 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 MSGN1A6NI15 193 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 ARGFXA6NJG6 315 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 NPIPA3F8WFD2 350 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 HSD17B6O14756 317 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 AGPAT2O15120 278 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 RER1O15258 196 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 HMGB3O15347 200 aaKnown RBP1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 BCAT2O15382 392 aaPredicted RBP1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 KLK10O43240 276 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 XRCC2O43543 280 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 TRAF3IP2O43734 574 aaPredicted RBP1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms