RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839		A0A087WW49	117 aa		11.76	□□□□□ -0.53
AGAP3-222	ENST00000490839	SNTN	A6NMZ2	147 aa		11.76	□□□□□ -0.53
AGAP3-222	ENST00000490839	NBR2	O15453	112 aa		11.76	□□□□□ -0.53
AGAP3-222	ENST00000490839	JTB	O76095	146 aa		11.76	□□□□□ -0.53
AGAP3-222	ENST00000490839	SNRPG	P62308	76 aa	Known RBP	11.76	□□□□□ -0.53
AGAP3-222	ENST00000490839	C5orf64	Q2M2E5	130 aa		11.76	□□□□□ -0.53
AGAP3-222	ENST00000490839	C6orf183	Q5T699	404 aa		11.76	□□□□□ -0.53
AGAP3-222	ENST00000490839	SGPP2	Q8IWX5	399 aa		11.76	□□□□□ -0.53
AGAP3-222	ENST00000490839	OR10V1	Q8NGI7	309 aa		11.76	□□□□□ -0.53
AGAP3-222	ENST00000490839	OR4C12	Q96R67	309 aa		11.76	□□□□□ -0.53
AGAP3-222	ENST00000490839	S100A13	Q99584	98 aa		11.76	□□□□□ -0.53
AGAP3-222	ENST00000490839	SPATA25	Q9BR10	227 aa		11.76	□□□□□ -0.53
AGAP3-222	ENST00000490839	ZNF251	Q9BRH9	671 aa		11.76	□□□□□ -0.53
AGAP3-222	ENST00000490839	JAM3	Q9BX67	310 aa		11.76	□□□□□ -0.53
AGAP3-222	ENST00000490839	ANKRD60	Q9BZ19	345 aa		11.76	□□□□□ -0.53
AGAP3-222	ENST00000490839	CST11	Q9H112	138 aa		11.76	□□□□□ -0.53
AGAP3-222	ENST00000490839	ISG20L2	Q9H9L3	353 aa	Known RBP	11.76	□□□□□ -0.53
AGAP3-222	ENST00000490839	SPACA1	Q9HBV2	294 aa		11.76	□□□□□ -0.53
AGAP3-222	ENST00000490839	TPSG1	Q9NRR2	321 aa		11.76	□□□□□ -0.53
AGAP3-222	ENST00000490839	C19orf73	Q9NVV2	129 aa		11.76	□□□□□ -0.53
AGAP3-222	ENST00000490839	ING4	Q9UNL4	249 aa		11.76	□□□□□ -0.53
AGAP3-222	ENST00000490839	ERGIC3	Q9Y282	383 aa		11.76	□□□□□ -0.53
AGAP3-222	ENST00000490839	HSPA12A	O43301	675 aa		11.75	□□□□□ -0.53
AGAP3-222	ENST00000490839	ZNF780A	O75290	641 aa	Predicted RBP	11.75	□□□□□ -0.53
AGAP3-222	ENST00000490839	HBZ	P02008	142 aa		11.75	□□□□□ -0.53
AGAP3-222	ENST00000490839	SERPINA2	P20848	420 aa		11.75	□□□□□ -0.53
AGAP3-222	ENST00000490839	CRIP2	P52943	208 aa	Predicted RBP	11.75	□□□□□ -0.53
AGAP3-222	ENST00000490839	ECSCR	Q19T08	205 aa		11.75	□□□□□ -0.53
AGAP3-222	ENST00000490839	C19orf54	Q5BKX5	351 aa		11.75	□□□□□ -0.53
AGAP3-222	ENST00000490839	TRAT1	Q6PIZ9	186 aa		11.75	□□□□□ -0.53
AGAP3-222	ENST00000490839	LHFPL3	Q86UP9	236 aa		11.75	□□□□□ -0.53
AGAP3-222	ENST00000490839		Q8N1Y9	231 aa		11.75	□□□□□ -0.53
AGAP3-222	ENST00000490839	TCTEX1D1	Q8N7M0	179 aa		11.75	□□□□□ -0.53
AGAP3-222	ENST00000490839	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	11.75	□□□□□ -0.53
AGAP3-222	ENST00000490839	LGALS12	Q96DT0	336 aa		11.75	□□□□□ -0.53
AGAP3-222	ENST00000490839	TRAPPC2L	Q9UL33	140 aa		11.75	□□□□□ -0.53
AGAP3-222	ENST00000490839	OAZ3	Q9UMX2	235 aa		11.75	□□□□□ -0.53
AGAP3-222	ENST00000490839	FOXA2	Q9Y261	457 aa	Predicted RBP	11.75	□□□□□ -0.53
AGAP3-222	ENST00000490839	AP4S1	Q9Y587	144 aa		11.75	□□□□□ -0.53
AGAP3-222	ENST00000490839		A0A1W2PN81	502 aa		11.74	□□□□□ -0.53
AGAP3-222	ENST00000490839		E9PI62	339 aa		11.74	□□□□□ -0.53
AGAP3-222	ENST00000490839	ARPC1B	O15143	372 aa	Known RBP	11.74	□□□□□ -0.53
AGAP3-222	ENST00000490839	SOX15	O60248	233 aa		11.74	□□□□□ -0.53
AGAP3-222	ENST00000490839	CD2	P06729	351 aa		11.74	□□□□□ -0.53
AGAP3-222	ENST00000490839	CNTFR	P26992	372 aa		11.74	□□□□□ -0.53
AGAP3-222	ENST00000490839	ZNF93	P35789	620 aa	Predicted RBP	11.74	□□□□□ -0.53
AGAP3-222	ENST00000490839	CHRNA7	P36544	502 aa		11.74	□□□□□ -0.53
AGAP3-222	ENST00000490839	SOX2	P48431	317 aa		11.74	□□□□□ -0.53
AGAP3-222	ENST00000490839	SYT6	Q5T7P8	510 aa	Predicted RBP	11.74	□□□□□ -0.53
AGAP3-222	ENST00000490839	DDI2	Q5TDH0	399 aa		11.74	□□□□□ -0.53
AGAP3-222	ENST00000490839	LIN54	Q6MZP7	749 aa		11.74	□□□□□ -0.53
AGAP3-222	ENST00000490839	PRR18	Q8N4B5	295 aa		11.74	□□□□□ -0.53
AGAP3-222	ENST00000490839	NPB	Q8NG41	125 aa		11.74	□□□□□ -0.53
AGAP3-222	ENST00000490839	OR1L1	Q8NH94	360 aa		11.74	□□□□□ -0.53
AGAP3-222	ENST00000490839	FLYWCH2	Q96CP2	140 aa	Known RBP	11.74	□□□□□ -0.53
AGAP3-222	ENST00000490839	ELOVL1	Q9BW60	279 aa		11.74	□□□□□ -0.53
AGAP3-222	ENST00000490839	MRPL20	Q9BYC9	149 aa	Known RBP	11.74	□□□□□ -0.53
AGAP3-222	ENST00000490839	TMEM138	Q9NPI0	162 aa		11.74	□□□□□ -0.53
AGAP3-222	ENST00000490839	RCC2	Q9P258	522 aa	Known RBP	11.74	□□□□□ -0.53
AGAP3-222	ENST00000490839	KIAA1456	Q9P272	454 aa		11.74	□□□□□ -0.53
AGAP3-222	ENST00000490839	STUB1	Q9UNE7	303 aa		11.74	□□□□□ -0.53
AGAP3-222	ENST00000490839	PLEC	Q15149	4684 aa	Known RBP	11.74	□□□□□ -0.53
AGAP3-222	ENST00000490839	MCRIP1	C9JLW8	97 aa		11.73	□□□□□ -0.53
AGAP3-222	ENST00000490839	NDUFA3	O95167	84 aa		11.73	□□□□□ -0.53
AGAP3-222	ENST00000490839	GTF2F2	P13984	249 aa		11.73	□□□□□ -0.53
AGAP3-222	ENST00000490839	GBX2	P52951	348 aa	Predicted RBP	11.73	□□□□□ -0.53
AGAP3-222	ENST00000490839	PPP3R1	P63098	170 aa		11.73	□□□□□ -0.53
AGAP3-222	ENST00000490839	NDP	Q00604	133 aa		11.73	□□□□□ -0.53
AGAP3-222	ENST00000490839	PYHIN1	Q6K0P9	492 aa		11.73	□□□□□ -0.53
AGAP3-222	ENST00000490839	GAPT	Q8N292	157 aa		11.73	□□□□□ -0.53
AGAP3-222	ENST00000490839	OR4K15	Q8NH41	348 aa		11.73	□□□□□ -0.53
AGAP3-222	ENST00000490839	GPR148	Q8TDV2	347 aa		11.73	□□□□□ -0.53
AGAP3-222	ENST00000490839	RGP1	Q92546	391 aa	Predicted RBP	11.73	□□□□□ -0.53
AGAP3-222	ENST00000490839	CENPN	Q96H22	339 aa	Predicted RBP	11.73	□□□□□ -0.53
AGAP3-222	ENST00000490839	RITA1	Q96K30	269 aa		11.73	□□□□□ -0.53
AGAP3-222	ENST00000490839	NABP2	Q9BQ15	211 aa		11.73	□□□□□ -0.53
AGAP3-222	ENST00000490839	ABHD14A	Q9BUJ0	271 aa		11.73	□□□□□ -0.53
AGAP3-222	ENST00000490839	ETAA1	Q9NY74	926 aa		11.73	□□□□□ -0.53
AGAP3-222	ENST00000490839	FBXO7	Q9Y3I1	522 aa		11.73	□□□□□ -0.53
AGAP3-222	ENST00000490839		A0A1W2PP11	408 aa		11.72	□□□□□ -0.53
AGAP3-222	ENST00000490839	FADS2	O95864	444 aa	Known RBP	11.72	□□□□□ -0.53
AGAP3-222	ENST00000490839	IGLV1-51	P01701	117 aa		11.72	□□□□□ -0.53
AGAP3-222	ENST00000490839	HSPB1	P04792	205 aa	Known RBP	11.72	□□□□□ -0.53
AGAP3-222	ENST00000490839	IFNA6	P05013	189 aa		11.72	□□□□□ -0.53
AGAP3-222	ENST00000490839	BDKRB2	P30411	391 aa		11.72	□□□□□ -0.53
AGAP3-222	ENST00000490839	SLC22A6	Q4U2R8	563 aa		11.72	□□□□□ -0.53
AGAP3-222	ENST00000490839	ZNF660	Q6AZW8	331 aa	Predicted RBP	11.72	□□□□□ -0.53
AGAP3-222	ENST00000490839	HAPLN4	Q86UW8	402 aa		11.72	□□□□□ -0.53
AGAP3-222	ENST00000490839	TMEM106A	Q96A25	262 aa		11.72	□□□□□ -0.53
AGAP3-222	ENST00000490839	OR2S2	Q9NQN1	319 aa		11.72	□□□□□ -0.53
AGAP3-222	ENST00000490839	ERVK13-1	Q9NX77	482 aa		11.72	□□□□□ -0.53
AGAP3-222	ENST00000490839	GMPPB	Q9Y5P6	360 aa		11.72	□□□□□ -0.53
AGAP3-222	ENST00000490839	SAC3D1	A6NKF1	404 aa		11.71	□□□□□ -0.53
AGAP3-222	ENST00000490839	CA11	O75493	328 aa		11.71	□□□□□ -0.53
AGAP3-222	ENST00000490839	GPR176	Q14439	515 aa		11.71	□□□□□ -0.53
AGAP3-222	ENST00000490839	LRRC36	Q1X8D7	754 aa		11.71	□□□□□ -0.53
AGAP3-222	ENST00000490839	MORN2	Q502X0	79 aa		11.71	□□□□□ -0.53
AGAP3-222	ENST00000490839	RAB12	Q6IQ22	244 aa		11.71	□□□□□ -0.53
AGAP3-222	ENST00000490839	ZNF833P	Q6ZTB9	187 aa		11.71	□□□□□ -0.53
AGAP3-222	ENST00000490839	ZNF554	Q86TJ5	538 aa		11.71	□□□□□ -0.53

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