RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 SERPINA2P20848 420 aa10.73□□□□□ -0.69
VARS-227ENST00000489979 CHRNA7P36544 502 aa10.73□□□□□ -0.69
VARS-227ENST00000489979 NDPQ00604 133 aa10.73□□□□□ -0.69
VARS-227ENST00000489979 C5orf64Q2M2E5 130 aa10.73□□□□□ -0.69
VARS-227ENST00000489979 DNAL1Q4LDG9 190 aa10.73□□□□□ -0.69
VARS-227ENST00000489979 SYT6Q5T7P8 510 aaPredicted RBP10.73□□□□□ -0.69
VARS-227ENST00000489979 LIN54Q6MZP7 749 aa10.73□□□□□ -0.69
VARS-227ENST00000489979 LINC00596Q86U02 117 aa10.73□□□□□ -0.69
VARS-227ENST00000489979 LHFPL3Q86UP9 236 aa10.73□□□□□ -0.69
VARS-227ENST00000489979 PRR18Q8N4B5 295 aa10.73□□□□□ -0.69
VARS-227ENST00000489979 CCDC197Q8NCU1 140 aa10.73□□□□□ -0.69
VARS-227ENST00000489979 OR5AK2Q8NH90 309 aa10.73□□□□□ -0.69
VARS-227ENST00000489979 OR1L1Q8NH94 360 aa10.73□□□□□ -0.69
VARS-227ENST00000489979 ALG8Q9BVK2 526 aa10.73□□□□□ -0.69
VARS-227ENST00000489979 ISG20L2Q9H9L3 353 aaKnown RBP10.73□□□□□ -0.69
VARS-227ENST00000489979 IMPAD1Q9NX62 359 aa10.73□□□□□ -0.69
VARS-227ENST00000489979 TAS2R4Q9NYW5 299 aa10.73□□□□□ -0.69
VARS-227ENST00000489979 IL36GQ9NZH8 169 aa10.73□□□□□ -0.69
VARS-227ENST00000489979 FBXO7Q9Y3I1 522 aa10.73□□□□□ -0.69
VARS-227ENST00000489979 E9PI62 339 aa10.72□□□□□ -0.69
VARS-227ENST00000489979 IGHV3-11P01762 117 aa10.72□□□□□ -0.69
VARS-227ENST00000489979 HBZP02008 142 aa10.72□□□□□ -0.69
VARS-227ENST00000489979 HSPB1P04792 205 aaKnown RBP10.72□□□□□ -0.69
VARS-227ENST00000489979 RPSAP08865 295 aaKnown RBP10.72□□□□□ -0.69
VARS-227ENST00000489979 ARSBP15848 533 aa10.72□□□□□ -0.69
VARS-227ENST00000489979 FASP25445 335 aa10.72□□□□□ -0.69
VARS-227ENST00000489979 SOX2P48431 317 aa10.72□□□□□ -0.69
VARS-227ENST00000489979 HAGHQ16775 308 aa10.72□□□□□ -0.69
VARS-227ENST00000489979 MPV17LQ2QL34 196 aa10.72□□□□□ -0.69
VARS-227ENST00000489979 C19orf54Q5BKX5 351 aa10.72□□□□□ -0.69
VARS-227ENST00000489979 STX19Q8N4C7 294 aa10.72□□□□□ -0.69
VARS-227ENST00000489979 TRUB1Q8WWH5 349 aaKnown RBP10.72□□□□□ -0.69
VARS-227ENST00000489979 FLYWCH2Q96CP2 140 aaKnown RBP10.72□□□□□ -0.69
VARS-227ENST00000489979 MRPL48Q96GC5 212 aaKnown RBP10.72□□□□□ -0.69
VARS-227ENST00000489979 RSRP1Q9BUV0 290 aa10.72□□□□□ -0.69
VARS-227ENST00000489979 ELOVL1Q9BW60 279 aa10.72□□□□□ -0.69
VARS-227ENST00000489979 MRPL20Q9BYC9 149 aaKnown RBP10.72□□□□□ -0.69
VARS-227ENST00000489979 TRAPPC2LQ9UL33 140 aa10.72□□□□□ -0.69
VARS-227ENST00000489979 FOXA2Q9Y261 457 aaPredicted RBP10.72□□□□□ -0.69
VARS-227ENST00000489979 ERGIC3Q9Y282 383 aa10.72□□□□□ -0.69
VARS-227ENST00000489979 EXOGQ9Y2C4 368 aaKnown RBP10.72□□□□□ -0.69
VARS-227ENST00000489979 A3GALT2U3KPV4 340 aa10.72□□□□□ -0.69
VARS-227ENST00000489979 A0A1W2PP11 408 aa10.71□□□□□ -0.69
VARS-227ENST00000489979 IGLV1-51P01701 117 aa10.71□□□□□ -0.69
VARS-227ENST00000489979 IFNA6P05013 189 aa10.71□□□□□ -0.69
VARS-227ENST00000489979 TMEM30BQ3MIR4 351 aa10.71□□□□□ -0.69
VARS-227ENST00000489979 C6orf183Q5T699 404 aa10.71□□□□□ -0.69
VARS-227ENST00000489979 STEAP3Q658P3 488 aa10.71□□□□□ -0.69
VARS-227ENST00000489979 ANKRD13BQ86YJ7 626 aa10.71□□□□□ -0.69
VARS-227ENST00000489979 NPBQ8NG41 125 aa10.71□□□□□ -0.69
VARS-227ENST00000489979 OR4K15Q8NH41 348 aa10.71□□□□□ -0.69
VARS-227ENST00000489979 LGALS12Q96DT0 336 aa10.71□□□□□ -0.69
VARS-227ENST00000489979 S100A13Q99584 98 aa10.71□□□□□ -0.69
VARS-227ENST00000489979 NABP2Q9BQ15 211 aa10.71□□□□□ -0.69
VARS-227ENST00000489979 JAM3Q9BX67 310 aa10.71□□□□□ -0.69
VARS-227ENST00000489979 CST11Q9H112 138 aa10.71□□□□□ -0.69
VARS-227ENST00000489979 RAB9BQ9NP90 201 aa10.71□□□□□ -0.69
VARS-227ENST00000489979 KIAA1456Q9P272 454 aa10.71□□□□□ -0.69
VARS-227ENST00000489979 STUB1Q9UNE7 303 aa10.71□□□□□ -0.69
VARS-227ENST00000489979 ZNF93P35789 620 aaPredicted RBP10.7□□□□□ -0.7
VARS-227ENST00000489979 CRIP2P52943 208 aaPredicted RBP10.7□□□□□ -0.7
VARS-227ENST00000489979 ADARB1P78563 741 aaKnown RBP10.7□□□□□ -0.7
VARS-227ENST00000489979 GNMTQ14749 295 aa10.7□□□□□ -0.7
VARS-227ENST00000489979 LRRC36Q1X8D7 754 aa10.7□□□□□ -0.7
VARS-227ENST00000489979 SLC25A30Q5SVS4 291 aa10.7□□□□□ -0.7
VARS-227ENST00000489979 ZNF660Q6AZW8 331 aaPredicted RBP10.7□□□□□ -0.7
VARS-227ENST00000489979 ODF3L1Q8IXM7 274 aa10.7□□□□□ -0.7
VARS-227ENST00000489979 SYS1Q8N2H4 156 aa10.7□□□□□ -0.7
VARS-227ENST00000489979 RGP1Q92546 391 aaPredicted RBP10.7□□□□□ -0.7
VARS-227ENST00000489979 ABHD14AQ9BUJ0 271 aa10.7□□□□□ -0.7
VARS-227ENST00000489979 OR2S2Q9NQN1 319 aa10.7□□□□□ -0.7
VARS-227ENST00000489979 PAK1IP1Q9NWT1 392 aaPredicted RBP10.7□□□□□ -0.7
VARS-227ENST00000489979 ETAA1Q9NY74 926 aa10.7□□□□□ -0.7
VARS-227ENST00000489979 FRAS1Q86XX4 4008 aa10.7□□□□□ -0.7
VARS-227ENST00000489979 MCRIP1C9JLW8 97 aa10.69□□□□□ -0.7
VARS-227ENST00000489979 NDUFA3O95167 84 aa10.69□□□□□ -0.7
VARS-227ENST00000489979 GTF2F2P13984 249 aa10.69□□□□□ -0.7
VARS-227ENST00000489979 RCC1P18754 421 aaPredicted RBP10.69□□□□□ -0.7
VARS-227ENST00000489979 SNRPGP62308 76 aaKnown RBP10.69□□□□□ -0.7
VARS-227ENST00000489979 SLC22A6Q4U2R8 563 aa10.69□□□□□ -0.7
VARS-227ENST00000489979 MORN2Q502X0 79 aa10.69□□□□□ -0.7
VARS-227ENST00000489979 DDI2Q5TDH0 399 aa10.69□□□□□ -0.7
VARS-227ENST00000489979 MEDAGQ5VYS4 303 aa10.69□□□□□ -0.7
VARS-227ENST00000489979 TCTEX1D1Q8N7M0 179 aa10.69□□□□□ -0.7
VARS-227ENST00000489979 ABHD5Q8WTS1 349 aa10.69□□□□□ -0.7
VARS-227ENST00000489979 MS4A10Q96PG2 267 aa10.69□□□□□ -0.7
VARS-227ENST00000489979 MYCBPQ99417 103 aaPredicted RBP10.69□□□□□ -0.7
VARS-227ENST00000489979 FBXL15Q9H469 300 aa10.69□□□□□ -0.7
VARS-227ENST00000489979 AASSQ9UDR5 926 aa10.69□□□□□ -0.7
VARS-227ENST00000489979 OAZ3Q9UMX2 235 aa10.69□□□□□ -0.7
VARS-227ENST00000489979 AP4S1Q9Y587 144 aa10.69□□□□□ -0.7
VARS-227ENST00000489979 NUBP2Q9Y5Y2 271 aa10.69□□□□□ -0.7
VARS-227ENST00000489979 SAC3D1A6NKF1 404 aa10.68□□□□□ -0.7
VARS-227ENST00000489979 ARPC1BO15143 372 aaKnown RBP10.68□□□□□ -0.7
VARS-227ENST00000489979 ZNF780AO75290 641 aaPredicted RBP10.68□□□□□ -0.7
VARS-227ENST00000489979 EGR2P11161 476 aaPredicted RBP10.68□□□□□ -0.7
VARS-227ENST00000489979 OR3A3P47888 321 aa10.68□□□□□ -0.7
VARS-227ENST00000489979 GTF2A1P52655 376 aaPredicted RBP10.68□□□□□ -0.7
VARS-227ENST00000489979 GBX2P52951 348 aaPredicted RBP10.68□□□□□ -0.7
VARS-227ENST00000489979 TPPP2P59282 170 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms