RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 MOB1BQ7L9L4 216 aa11.45□□□□□ -0.58
BRCA1-218ENST00000489037 MOB3BQ86TA1 216 aa11.45□□□□□ -0.58
BRCA1-218ENST00000489037 FAM89BQ8N5H3 189 aa11.45□□□□□ -0.58
BRCA1-218ENST00000489037 DRAM1Q8N682 238 aa11.45□□□□□ -0.58
BRCA1-218ENST00000489037 KLHDC1Q8N7A1 406 aa11.45□□□□□ -0.58
BRCA1-218ENST00000489037 OR10V1Q8NGI7 309 aa11.45□□□□□ -0.58
BRCA1-218ENST00000489037 RBM14Q96PK6 669 aaKnown RBP11.45□□□□□ -0.58
BRCA1-218ENST00000489037 ZNF702PQ9H963 129 aa11.45□□□□□ -0.58
BRCA1-218ENST00000489037 VCX3AQ9NNX9 186 aa11.45□□□□□ -0.58
BRCA1-218ENST00000489037 JPT1Q9UK76 154 aa11.45□□□□□ -0.58
BRCA1-218ENST00000489037 HSF4Q9ULV5 492 aa11.45□□□□□ -0.58
BRCA1-218ENST00000489037 MGAT4AQ9UM21 535 aa11.45□□□□□ -0.58
BRCA1-218ENST00000489037 FBN3Q75N90 2809 aa11.44□□□□□ -0.58
BRCA1-218ENST00000489037 WNK1Q9H4A3 2382 aa11.44□□□□□ -0.58
BRCA1-218ENST00000489037 IFITM5A6NNB3 132 aa11.44□□□□□ -0.58
BRCA1-218ENST00000489037 SNRNP70P08621 437 aaKnown RBP11.44□□□□□ -0.58
BRCA1-218ENST00000489037 TMEM11P17152 192 aa11.44□□□□□ -0.58
BRCA1-218ENST00000489037 GADD45AP24522 165 aa11.44□□□□□ -0.58
BRCA1-218ENST00000489037 VDAC2P45880 294 aaPredicted RBP11.44□□□□□ -0.58
BRCA1-218ENST00000489037 KRTAP10-3P60369 221 aa11.44□□□□□ -0.58
BRCA1-218ENST00000489037 HTD2P86397 168 aa11.44□□□□□ -0.58
BRCA1-218ENST00000489037 ZNF816Q0VGE8 651 aaPredicted RBP11.44□□□□□ -0.58
BRCA1-218ENST00000489037 NEDD8Q15843 81 aa11.44□□□□□ -0.58
BRCA1-218ENST00000489037 STEAP3Q658P3 488 aa11.44□□□□□ -0.58
BRCA1-218ENST00000489037 TPRA1Q86W33 373 aa11.44□□□□□ -0.58
BRCA1-218ENST00000489037 Q8N2B8 174 aa11.44□□□□□ -0.58
BRCA1-218ENST00000489037 OR56B4Q8NH76 319 aa11.44□□□□□ -0.58
BRCA1-218ENST00000489037 TXNL4BQ9NX01 149 aaKnown RBP11.44□□□□□ -0.58
BRCA1-218ENST00000489037 A0A0A6YYD4 124 aa11.43□□□□□ -0.58
BRCA1-218ENST00000489037 TMEM272A0A1B0GTI8 110 aa11.43□□□□□ -0.58
BRCA1-218ENST00000489037 A0A1W2PPI3 338 aa11.43□□□□□ -0.58
BRCA1-218ENST00000489037 METTL21EPA6NDL7 271 aa11.43□□□□□ -0.58
BRCA1-218ENST00000489037 TXNL1O43396 289 aa11.43□□□□□ -0.58
BRCA1-218ENST00000489037 REG1BP48304 166 aa11.43□□□□□ -0.58
BRCA1-218ENST00000489037 OR10A3P58181 314 aa11.43□□□□□ -0.58
BRCA1-218ENST00000489037 BLCAPP62952 87 aa11.43□□□□□ -0.58
BRCA1-218ENST00000489037 MORN2Q502X0 79 aa11.43□□□□□ -0.58
BRCA1-218ENST00000489037 SLC25A48Q6ZT89 311 aaKnown RBP11.43□□□□□ -0.58
BRCA1-218ENST00000489037 OR52L2PQ8NGH6 319 aa11.43□□□□□ -0.58
BRCA1-218ENST00000489037 IL1F10Q8WWZ1 152 aa11.43□□□□□ -0.58
BRCA1-218ENST00000489037 ARHGAP5-AS1Q96IT6 56 aa11.43□□□□□ -0.58
BRCA1-218ENST00000489037 KCTD7Q96MP8 289 aa11.43□□□□□ -0.58
BRCA1-218ENST00000489037 CMSS1Q9BQ75 279 aaKnown RBP11.43□□□□□ -0.58
BRCA1-218ENST00000489037 AK3Q9UIJ7 227 aa11.43□□□□□ -0.58
BRCA1-218ENST00000489037 MOB4Q9Y3A3 225 aa11.43□□□□□ -0.58
BRCA1-218ENST00000489037 A0A087WXM4 84 aa11.42□□□□□ -0.58
BRCA1-218ENST00000489037 IGHV1-3A0A0C4DH29 117 aa11.42□□□□□ -0.58
BRCA1-218ENST00000489037 FAM90A9PA6NNJ1 464 aa11.42□□□□□ -0.58
BRCA1-218ENST00000489037 YPEL1O60688 119 aa11.42□□□□□ -0.58
BRCA1-218ENST00000489037 TNFAIP8O95379 198 aa11.42□□□□□ -0.58
BRCA1-218ENST00000489037 NAPSAO96009 420 aa11.42□□□□□ -0.58
BRCA1-218ENST00000489037 CD3GP09693 182 aa11.42□□□□□ -0.58
BRCA1-218ENST00000489037 RAB6AP20340 208 aa11.42□□□□□ -0.58
BRCA1-218ENST00000489037 DIAPH2-AS1Q14236 149 aa11.42□□□□□ -0.58
BRCA1-218ENST00000489037 HABP2Q14520 560 aaPredicted RBP11.42□□□□□ -0.58
BRCA1-218ENST00000489037 HMGN3Q15651 99 aa11.42□□□□□ -0.58
BRCA1-218ENST00000489037 C2orf68Q2NKX9 166 aa11.42□□□□□ -0.58
BRCA1-218ENST00000489037 ABCA11PQ4W5N1 156 aa11.42□□□□□ -0.58
BRCA1-218ENST00000489037 CT45A1Q5HYN5 189 aa11.42□□□□□ -0.58
BRCA1-218ENST00000489037 C9orf152Q5JTZ5 239 aa11.42□□□□□ -0.58
BRCA1-218ENST00000489037 TREML4Q6UXN2 200 aa11.42□□□□□ -0.58
BRCA1-218ENST00000489037 TGIF2LXQ8IUE1 241 aa11.42□□□□□ -0.58
BRCA1-218ENST00000489037 LYG1Q8N1E2 194 aa11.42□□□□□ -0.58
BRCA1-218ENST00000489037 CT45A3Q8NHU0 189 aa11.42□□□□□ -0.58
BRCA1-218ENST00000489037 RAB3CQ96E17 227 aa11.42□□□□□ -0.58
BRCA1-218ENST00000489037 YPEL2Q96QA6 119 aa11.42□□□□□ -0.58
BRCA1-218ENST00000489037 ABHD14AQ9BUJ0 271 aa11.42□□□□□ -0.58
BRCA1-218ENST00000489037 PECRQ9BY49 303 aa11.42□□□□□ -0.58
BRCA1-218ENST00000489037 C12orf4Q9NQ89 552 aa11.42□□□□□ -0.58
BRCA1-218ENST00000489037 TRBV6-6A0A0A6YYG2 114 aa11.41□□□□□ -0.58
BRCA1-218ENST00000489037 LOC100506127A0A0U1RQW1 187 aa11.41□□□□□ -0.58
BRCA1-218ENST00000489037 SHISA3A0PJX4 238 aa11.41□□□□□ -0.58
BRCA1-218ENST00000489037 NOTOA8MTQ0 251 aa11.41□□□□□ -0.58
BRCA1-218ENST00000489037 LDLRAD4O15165 306 aa11.41□□□□□ -0.58
BRCA1-218ENST00000489037 SLC31A2O15432 143 aa11.41□□□□□ -0.58
BRCA1-218ENST00000489037 HSPA12AO43301 675 aa11.41□□□□□ -0.58
BRCA1-218ENST00000489037 IGKV1D-33P01593 117 aa11.41□□□□□ -0.58
BRCA1-218ENST00000489037 IGKV1-33P01594 117 aa11.41□□□□□ -0.58
BRCA1-218ENST00000489037 CD36P16671 472 aa11.41□□□□□ -0.58
BRCA1-218ENST00000489037 PPP1CCP36873 323 aaKnown RBP11.41□□□□□ -0.58
BRCA1-218ENST00000489037 TMEM50BP56557 158 aa11.41□□□□□ -0.58
BRCA1-218ENST00000489037 HNF4GQ14541 408 aa11.41□□□□□ -0.58
BRCA1-218ENST00000489037 LY6G6FQ5SQ64 297 aa11.41□□□□□ -0.58
BRCA1-218ENST00000489037 FAM53AQ6NSI3 398 aaPredicted RBP11.41□□□□□ -0.58
BRCA1-218ENST00000489037 ZNF880Q6PDB4 577 aa11.41□□□□□ -0.58
BRCA1-218ENST00000489037 ZNF439Q8NDP4 499 aa11.41□□□□□ -0.58
BRCA1-218ENST00000489037 OR2AK2Q8NG84 335 aa11.41□□□□□ -0.58
BRCA1-218ENST00000489037 OR2T10Q8NGZ9 312 aa11.41□□□□□ -0.58
BRCA1-218ENST00000489037 RTN4IP1Q8WWV3 396 aaPredicted RBP11.41□□□□□ -0.58
BRCA1-218ENST00000489037 CFHR4Q92496 578 aa11.41□□□□□ -0.58
BRCA1-218ENST00000489037 PTX4Q96A99 478 aa11.41□□□□□ -0.58
BRCA1-218ENST00000489037 CHCHD6Q9BRQ6 235 aa11.41□□□□□ -0.58
BRCA1-218ENST00000489037 OR51E2Q9H255 320 aa11.41□□□□□ -0.58
BRCA1-218ENST00000489037 SERTAD4Q9NUC0 356 aa11.41□□□□□ -0.58
BRCA1-218ENST00000489037 FOXI3A8MTJ6 420 aaPredicted RBP11.4□□□□□ -0.58
BRCA1-218ENST00000489037 FBXO24O75426 580 aa11.4□□□□□ -0.58
BRCA1-218ENST00000489037 CSF1P09603 554 aa11.4□□□□□ -0.58
BRCA1-218ENST00000489037 CD1BP29016 333 aa11.4□□□□□ -0.58
BRCA1-218ENST00000489037 ZNF134P52741 427 aa11.4□□□□□ -0.58
BRCA1-218ENST00000489037 ZNF137PP52743 207 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms