RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 FAM231AP0DMU4 169 aa1.07□□□□□ -2.24
R3HDM1-219ENST00000488035 FAM231CP0DMU5 169 aa1.07□□□□□ -2.24
R3HDM1-219ENST00000488035 BLVRBP30043 206 aaPredicted RBP1.07□□□□□ -2.24
R3HDM1-219ENST00000488035 DEFB103AP81534 67 aa1.07□□□□□ -2.24
R3HDM1-219ENST00000488035 PAFAH1B3Q15102 231 aaKnown RBP1.07□□□□□ -2.24
R3HDM1-219ENST00000488035 TMEM249Q2WGJ8 235 aa1.07□□□□□ -2.24
R3HDM1-219ENST00000488035 SPIN4Q56A73 249 aa1.07□□□□□ -2.24
R3HDM1-219ENST00000488035 SDIM1Q6ZPB5 146 aa1.07□□□□□ -2.24
R3HDM1-219ENST00000488035 DNAAF3Q8N9W5 541 aa1.07□□□□□ -2.24
R3HDM1-219ENST00000488035 TMEM75Q8N9X5 138 aa1.07□□□□□ -2.24
R3HDM1-219ENST00000488035 OR4P4Q8NGL7 312 aa1.07□□□□□ -2.24
R3HDM1-219ENST00000488035 GTF2H4Q92759 462 aa1.07□□□□□ -2.24
R3HDM1-219ENST00000488035 GALMQ96C23 342 aa1.07□□□□□ -2.24
R3HDM1-219ENST00000488035 CHST5Q9GZS9 411 aa1.07□□□□□ -2.24
R3HDM1-219ENST00000488035 GTSF1LQ9H1H1 148 aa1.07□□□□□ -2.24
R3HDM1-219ENST00000488035 LRRC19Q9H756 370 aa1.07□□□□□ -2.24
R3HDM1-219ENST00000488035 SAMHD1Q9Y3Z3 626 aaKnown RBP1.07□□□□□ -2.24
R3HDM1-219ENST00000488035 HEY1Q9Y5J3 304 aa1.07□□□□□ -2.24
R3HDM1-219ENST00000488035 ARHGAP32A7KAX9 2087 aa1.07□□□□□ -2.24
R3HDM1-219ENST00000488035 MYO5BQ9ULV0 1848 aa1.07□□□□□ -2.24
R3HDM1-219ENST00000488035 KIAA0232Q92628 1395 aa1.07□□□□□ -2.24
R3HDM1-219ENST00000488035 COL5A3P25940 1745 aaPredicted RBP1.06□□□□□ -2.24
R3HDM1-219ENST00000488035 FAM25EA8MYX2 175 aa1.06□□□□□ -2.24
R3HDM1-219ENST00000488035 MKRN2OSH3BPM6 223 aa1.06□□□□□ -2.24
R3HDM1-219ENST00000488035 RAB36O95755 333 aa1.06□□□□□ -2.24
R3HDM1-219ENST00000488035 ATF1P18846 271 aa1.06□□□□□ -2.24
R3HDM1-219ENST00000488035 RCVRNP35243 200 aa1.06□□□□□ -2.24
R3HDM1-219ENST00000488035 PPP1CCP36873 323 aaKnown RBP1.06□□□□□ -2.24
R3HDM1-219ENST00000488035 GABRA4P48169 554 aa1.06□□□□□ -2.24
R3HDM1-219ENST00000488035 LINC00313P59037 77 aa1.06□□□□□ -2.24
R3HDM1-219ENST00000488035 FAM3AP98173 230 aa1.06□□□□□ -2.24
R3HDM1-219ENST00000488035 SLAMF1Q13291 335 aa1.06□□□□□ -2.24
R3HDM1-219ENST00000488035 SS18Q15532 418 aa1.06□□□□□ -2.24
R3HDM1-219ENST00000488035 TRMT12Q53H54 448 aaKnown RBP1.06□□□□□ -2.24
R3HDM1-219ENST00000488035 RBM48Q5RL73 367 aaKnown RBP1.06□□□□□ -2.24
R3HDM1-219ENST00000488035 TIMM23BQ5SRD1 257 aa1.06□□□□□ -2.24
R3HDM1-219ENST00000488035 MTERF4Q7Z6M4 381 aaKnown RBP1.06□□□□□ -2.24
R3HDM1-219ENST00000488035 BLIDQ8IZY5 108 aa1.06□□□□□ -2.24
R3HDM1-219ENST00000488035 DYNC2LI1Q8TCX1 351 aa1.06□□□□□ -2.24
R3HDM1-219ENST00000488035 DTD1Q8TEA8 209 aa1.06□□□□□ -2.24
R3HDM1-219ENST00000488035 CAPZA3Q96KX2 299 aa1.06□□□□□ -2.24
R3HDM1-219ENST00000488035 KLF6Q99612 283 aaPredicted RBP1.06□□□□□ -2.24
R3HDM1-219ENST00000488035 EBNA1BP2Q99848 306 aaKnown RBP1.06□□□□□ -2.24
R3HDM1-219ENST00000488035 C1QTNF6Q9BXI9 259 aa1.06□□□□□ -2.24
R3HDM1-219ENST00000488035 ASCL3Q9NQ33 180 aa1.06□□□□□ -2.24
R3HDM1-219ENST00000488035 SCML1Q9UN30 329 aa1.06□□□□□ -2.24
R3HDM1-219ENST00000488035 ADAMTS7Q9UKP4 1686 aa1.06□□□□□ -2.24
R3HDM1-219ENST00000488035 CHD2O14647 1828 aaKnown RBP1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 A0A0J9YX75 114 aa1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 DENRO43583 198 aaKnown RBP1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 CPMP14384 443 aa1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 ZNF7P17097 686 aaPredicted RBP1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 ORM2P19652 201 aa1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 GADD45AP24522 165 aa1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 ADORA1P30542 326 aa1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 KDELR2P33947 212 aa1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 SPAM1P38567 509 aa1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 PSMB3P49720 205 aa1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 DLX6P56179 175 aa1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 ACTBP60709 375 aa1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 RAB8AP61006 207 aa1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 ACTG1P63261 375 aa1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 PMS2P3Q13401 168 aa1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 SYCP1Q15431 976 aa1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 MESTQ5EB52 335 aa1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 ZBTB8OSQ8IWT0 167 aa1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 C17orf78Q8N4C9 275 aa1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 OR4C16Q8NGL9 310 aa1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 OR4K13Q8NH42 304 aa1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 TAMM41Q96BW9 452 aa1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 UPK3BQ9BT76 320 aa1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 BBS2Q9BXC9 721 aa1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 BCL2L14Q9BZR8 327 aa1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 MRPS16Q9Y3D3 137 aaKnown RBP1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 CLUHO75153 1309 aa1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 PLCH2O75038 1416 aa1.05□□□□□ -2.24
R3HDM1-219ENST00000488035 PLXNA3P51805 1871 aa1.04□□□□□ -2.24
R3HDM1-219ENST00000488035 IQCF5A8MTL0 148 aa1.04□□□□□ -2.24
R3HDM1-219ENST00000488035 C9J4A7 227 aa1.04□□□□□ -2.24
R3HDM1-219ENST00000488035 J3QKU1 62 aa1.04□□□□□ -2.24
R3HDM1-219ENST00000488035 PHYHO14832 338 aa1.04□□□□□ -2.24
R3HDM1-219ENST00000488035 SYNGR1O43759 233 aa1.04□□□□□ -2.24
R3HDM1-219ENST00000488035 LY6HO94772 140 aa1.04□□□□□ -2.24
R3HDM1-219ENST00000488035 NPPAP01160 153 aa1.04□□□□□ -2.24
R3HDM1-219ENST00000488035 OR4A8P0C604 315 aa1.04□□□□□ -2.24
R3HDM1-219ENST00000488035 IGHV3-30-3P0DP02 117 aa1.04□□□□□ -2.24
R3HDM1-219ENST00000488035 IFI30P13284 250 aa1.04□□□□□ -2.24
R3HDM1-219ENST00000488035 GRPRP30550 384 aa1.04□□□□□ -2.24
R3HDM1-219ENST00000488035 STC1P52823 247 aa1.04□□□□□ -2.24
R3HDM1-219ENST00000488035 GTF2BQ00403 316 aa1.04□□□□□ -2.24
R3HDM1-219ENST00000488035 ZNHIT3Q15649 155 aaPredicted RBP1.04□□□□□ -2.24
R3HDM1-219ENST00000488035 MAPK14Q16539 360 aa1.04□□□□□ -2.24
R3HDM1-219ENST00000488035 KRTAP13-4Q3LI77 160 aa1.04□□□□□ -2.24
R3HDM1-219ENST00000488035 TMEM176BQ3YBM2 270 aaPredicted RBP1.04□□□□□ -2.24
R3HDM1-219ENST00000488035 MRPL51Q4U2R6 128 aaKnown RBP1.04□□□□□ -2.24
R3HDM1-219ENST00000488035 SPATA31B1PQ5VZV4 182 aa1.04□□□□□ -2.24
R3HDM1-219ENST00000488035 TTC33Q6PID6 262 aaPredicted RBP1.04□□□□□ -2.24
R3HDM1-219ENST00000488035 SYCE1Q8N0S2 351 aa1.04□□□□□ -2.24
R3HDM1-219ENST00000488035 RNASE11Q8TAA1 199 aaKnown RBP1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms