RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 OR51J1Q9H342 316 aa15.05■□□□□ -0
SMPDL3A-202ENST00000487215 PARP11Q9NR21 331 aa15.05■□□□□ -0
SMPDL3A-202ENST00000487215 MRPS18AQ9NVS2 196 aaKnown RBP15.05■□□□□ -0
SMPDL3A-202ENST00000487215 GNG12Q9UBI6 72 aa15.05■□□□□ -0
SMPDL3A-202ENST00000487215 TRAV41A0A0B4J266 112 aa15.04■□□□□ -0
SMPDL3A-202ENST00000487215 LOC100130705A0A1B0GUX0 176 aa15.04■□□□□ -0
SMPDL3A-202ENST00000487215 A0A1W2PP11 408 aa15.04■□□□□ -0
SMPDL3A-202ENST00000487215 LANCL1O43813 399 aa15.04■□□□□ -0
SMPDL3A-202ENST00000487215 SLURP1P55000 103 aa15.04■□□□□ -0
SMPDL3A-202ENST00000487215 CCDC58Q4VC31 144 aa15.04■□□□□ -0
SMPDL3A-202ENST00000487215 AMBNQ9NP70 447 aa15.04■□□□□ -0
SMPDL3A-202ENST00000487215 SORL1Q92673 2214 aa15.03■□□□□ -0
SMPDL3A-202ENST00000487215 IGHV7-81A0A0B4J1V7 117 aa15.03■□□□□ -0
SMPDL3A-202ENST00000487215 HLA-DRB1P01911 266 aa15.03■□□□□ -0
SMPDL3A-202ENST00000487215 CNTFRP26992 372 aa15.03■□□□□ -0
SMPDL3A-202ENST00000487215 ZNF93P35789 620 aaPredicted RBP15.03■□□□□ -0
SMPDL3A-202ENST00000487215 GTF2A1P52655 376 aaPredicted RBP15.03■□□□□ -0
SMPDL3A-202ENST00000487215 ACTBP60709 375 aa15.03■□□□□ -0
SMPDL3A-202ENST00000487215 TMEM30BQ3MIR4 351 aa15.03■□□□□ -0
SMPDL3A-202ENST00000487215 DDI2Q5TDH0 399 aa15.03■□□□□ -0
SMPDL3A-202ENST00000487215 STX19Q8N4C7 294 aa15.03■□□□□ -0
SMPDL3A-202ENST00000487215 OR52I1Q8NGK6 324 aa15.03■□□□□ -0
SMPDL3A-202ENST00000487215 OR6Q1Q8NGQ2 317 aa15.03■□□□□ -0
SMPDL3A-202ENST00000487215 OR1L1Q8NH94 360 aa15.03■□□□□ -0
SMPDL3A-202ENST00000487215 GPR148Q8TDV2 347 aa15.03■□□□□ -0
SMPDL3A-202ENST00000487215 RITA1Q96K30 269 aa15.03■□□□□ -0
SMPDL3A-202ENST00000487215 TM2D3Q9BRN9 247 aa15.03■□□□□ -0
SMPDL3A-202ENST00000487215 CHCHD3Q9NX63 227 aaKnown RBP15.03■□□□□ -0
SMPDL3A-202ENST00000487215 TRAPPC2LQ9UL33 140 aa15.03■□□□□ -0
SMPDL3A-202ENST00000487215 IRGMA1A4Y4 181 aa15.02■□□□□ -0
SMPDL3A-202ENST00000487215 SPINT2O43291 252 aa15.02■□□□□ -0
SMPDL3A-202ENST00000487215 HBZP02008 142 aa15.02■□□□□ -0
SMPDL3A-202ENST00000487215 BLVRBP30043 206 aaPredicted RBP15.02■□□□□ -0
SMPDL3A-202ENST00000487215 SYT6Q5T7P8 510 aaPredicted RBP15.02■□□□□ -0
SMPDL3A-202ENST00000487215 RPL22L1Q6P5R6 122 aaKnown RBP15.02■□□□□ -0
SMPDL3A-202ENST00000487215 TMPRSS11AQ6ZMR5 421 aa15.02■□□□□ -0
SMPDL3A-202ENST00000487215 PRR18Q8N4B5 295 aa15.02■□□□□ -0
SMPDL3A-202ENST00000487215 MINDY2Q8NBR6 621 aa15.02■□□□□ -0
SMPDL3A-202ENST00000487215 OR4K15Q8NH41 348 aa15.02■□□□□ -0
SMPDL3A-202ENST00000487215 ARPC1AQ92747 370 aa15.02■□□□□ -0
SMPDL3A-202ENST00000487215 S100A13Q99584 98 aa15.02■□□□□ -0
SMPDL3A-202ENST00000487215 EDA2RQ9HAV5 297 aa15.02■□□□□ -0
SMPDL3A-202ENST00000487215 RAB9BQ9NP90 201 aa15.02■□□□□ -0
SMPDL3A-202ENST00000487215 TMEM138Q9NPI0 162 aa15.02■□□□□ -0
SMPDL3A-202ENST00000487215 PAK1IP1Q9NWT1 392 aaPredicted RBP15.02■□□□□ -0
SMPDL3A-202ENST00000487215 CSMD3Q7Z407 3707 aa15.02□□□□□ -0.01
SMPDL3A-202ENST00000487215 HYDINQ4G0P3 5121 aa15.01□□□□□ -0.01
SMPDL3A-202ENST00000487215 MAGEA13PA6NCF6 341 aa15.01□□□□□ -0.01
SMPDL3A-202ENST00000487215 LINC01619G3V211 115 aa15.01□□□□□ -0.01
SMPDL3A-202ENST00000487215 DCKP27707 260 aa15.01□□□□□ -0.01
SMPDL3A-202ENST00000487215 PPP3R1P63098 170 aa15.01□□□□□ -0.01
SMPDL3A-202ENST00000487215 SRSF7Q16629 238 aaKnown RBP eCLIP15.01□□□□□ -0.01
SMPDL3A-202ENST00000487215 SLC22A6Q4U2R8 563 aa15.01□□□□□ -0.01
SMPDL3A-202ENST00000487215 C6orf183Q5T699 404 aa15.01□□□□□ -0.01
SMPDL3A-202ENST00000487215 STEAP3Q658P3 488 aa15.01□□□□□ -0.01
SMPDL3A-202ENST00000487215 ACSM6Q6P461 480 aa15.01□□□□□ -0.01
SMPDL3A-202ENST00000487215 ZNF555Q8NEP9 628 aa15.01□□□□□ -0.01
SMPDL3A-202ENST00000487215 TMEM106AQ96A25 262 aa15.01□□□□□ -0.01
SMPDL3A-202ENST00000487215 ZNF251Q9BRH9 671 aa15.01□□□□□ -0.01
SMPDL3A-202ENST00000487215 ANKRD60Q9BZ19 345 aa15.01□□□□□ -0.01
SMPDL3A-202ENST00000487215 TOLLIPQ9H0E2 274 aa15.01□□□□□ -0.01
SMPDL3A-202ENST00000487215 GHITMQ9H3K2 345 aa15.01□□□□□ -0.01
SMPDL3A-202ENST00000487215 S100A14Q9HCY8 104 aa15.01□□□□□ -0.01
SMPDL3A-202ENST00000487215 FGF20Q9NP95 211 aaPredicted RBP15.01□□□□□ -0.01
SMPDL3A-202ENST00000487215 TPSG1Q9NRR2 321 aa15.01□□□□□ -0.01
SMPDL3A-202ENST00000487215 RCC2Q9P258 522 aaKnown RBP15.01□□□□□ -0.01
SMPDL3A-202ENST00000487215 IGHV4OR15-8A0A075B7B6 117 aa15□□□□□ -0.01
SMPDL3A-202ENST00000487215 A0A087WW49 117 aa15□□□□□ -0.01
SMPDL3A-202ENST00000487215 NBR2O15453 112 aa15□□□□□ -0.01
SMPDL3A-202ENST00000487215 SOX15O60248 233 aa15□□□□□ -0.01
SMPDL3A-202ENST00000487215 ZNF780AO75290 641 aaPredicted RBP15□□□□□ -0.01
SMPDL3A-202ENST00000487215 GTF2F2P13984 249 aa15□□□□□ -0.01
SMPDL3A-202ENST00000487215 BDKRB2P30411 391 aa15□□□□□ -0.01
SMPDL3A-202ENST00000487215 ADARB1P78563 741 aaKnown RBP15□□□□□ -0.01
SMPDL3A-202ENST00000487215 NDPQ00604 133 aa15□□□□□ -0.01
SMPDL3A-202ENST00000487215 C5orf64Q2M2E5 130 aa15□□□□□ -0.01
SMPDL3A-202ENST00000487215 PQLC1Q8N2U9 271 aa15□□□□□ -0.01
SMPDL3A-202ENST00000487215 ISOC1Q96CN7 298 aa15□□□□□ -0.01
SMPDL3A-202ENST00000487215 RDH12Q96NR8 316 aa15□□□□□ -0.01
SMPDL3A-202ENST00000487215 SLC29A1Q99808 456 aa15□□□□□ -0.01
SMPDL3A-202ENST00000487215 MRPL20Q9BYC9 149 aaKnown RBP15□□□□□ -0.01
SMPDL3A-202ENST00000487215 ETAA1Q9NY74 926 aa15□□□□□ -0.01
SMPDL3A-202ENST00000487215 MCRIP1C9JLW8 97 aa14.99□□□□□ -0.01
SMPDL3A-202ENST00000487215 LDLRAD4O15165 306 aa14.99□□□□□ -0.01
SMPDL3A-202ENST00000487215 LGALS1P09382 135 aaKnown RBP14.99□□□□□ -0.01
SMPDL3A-202ENST00000487215 OR8U9P0C7N5 309 aa14.99□□□□□ -0.01
SMPDL3A-202ENST00000487215 LIMS3P0CW19 117 aa14.99□□□□□ -0.01
SMPDL3A-202ENST00000487215 LIMS4P0CW20 117 aa14.99□□□□□ -0.01
SMPDL3A-202ENST00000487215 RCC1P18754 421 aaPredicted RBP14.99□□□□□ -0.01
SMPDL3A-202ENST00000487215 MED21Q13503 144 aa14.99□□□□□ -0.01
SMPDL3A-202ENST00000487215 GNMTQ14749 295 aa14.99□□□□□ -0.01
SMPDL3A-202ENST00000487215 ECSCRQ19T08 205 aa14.99□□□□□ -0.01
SMPDL3A-202ENST00000487215 MORN2Q502X0 79 aa14.99□□□□□ -0.01
SMPDL3A-202ENST00000487215 C19orf54Q5BKX5 351 aa14.99□□□□□ -0.01
SMPDL3A-202ENST00000487215 XAF1Q6GPH4 301 aa14.99□□□□□ -0.01
SMPDL3A-202ENST00000487215 LIN54Q6MZP7 749 aa14.99□□□□□ -0.01
SMPDL3A-202ENST00000487215 ADAMTSL5Q6ZMM2 481 aa14.99□□□□□ -0.01
SMPDL3A-202ENST00000487215 ODF3L1Q8IXM7 274 aa14.99□□□□□ -0.01
SMPDL3A-202ENST00000487215 GAPTQ8N292 157 aa14.99□□□□□ -0.01
SMPDL3A-202ENST00000487215 CASTOR1Q8WTX7 329 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms