RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 NDUFS5O43920 106 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 MRPS14O60783 128 aaKnown RBP1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 IGKV1-17P01599 117 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 SERPINA6P08185 405 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 HLA-EP13747 358 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 OGNP20774 298 aaKnown RBP1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 MPIP34949 423 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 CRATP43155 626 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 OMPP47874 163 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 PSMD8P48556 350 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 IDH2P48735 452 aaKnown RBP1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 SRP9P49458 86 aaKnown RBP1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 SERPINB9P50453 376 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 RAB5CP51148 216 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 GABARAPL2P60520 117 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 IFITM2Q01629 132 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 GNA12Q03113 381 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 TMED2Q15363 201 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 ZNHIT3Q15649 155 aaPredicted RBP1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 GRK1Q15835 563 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 TAL2Q16559 108 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 FBXL19-AS1Q494R0 122 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 TTC32Q5I0X7 151 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 CLLU1Q5K131 121 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 HACD4Q5VWC8 232 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 LPCAT4Q643R3 524 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 MORN3Q6PF18 240 aaPredicted RBP1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 ZNF773Q6PK81 442 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 SPINT4Q6UDR6 99 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 C16orf47Q6ZP98 133 aaPredicted RBP1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 NT5DC3Q86UY8 548 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 COMMD7Q86VX2 200 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 ZBTB8OSQ8IWT0 167 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 TCTE3Q8IZS6 198 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 CA13Q8N1Q1 262 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 GDPD1Q8N9F7 314 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 ZNF555Q8NEP9 628 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 OR6N2Q8NGY6 317 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 OR5J2Q8NH18 312 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 STOML3Q8TAV4 291 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 NT5CQ8TCD5 201 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 ZNF721Q8TF20 911 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 C10orf82Q8WW14 230 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 RBPMSQ93062 196 aaKnown RBP1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 HGDQ93099 445 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 TMEM203Q969S6 136 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 ERMAPQ96PL5 475 aaPredicted RBP1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 SEC22CQ9BRL7 303 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 MED18Q9BUE0 208 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 COA1Q9GZY4 146 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 METTL9Q9H1A3 318 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 TRABDQ9H4I3 376 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 LINC00574Q9H8X3 128 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 SPACA1Q9HBV2 294 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 AGPAT3Q9NRZ7 376 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 CA10Q9NS85 328 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 IMP3Q9NV31 184 aaKnown RBP1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 TAS2R9Q9NYW1 312 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 SCP2D1Q9UJQ7 156 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 RAB22AQ9UL26 194 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 SLC7A11Q9UPY5 501 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 ORC6Q9Y5N6 252 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 ALG5Q9Y673 324 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 N4BP2Q86UW6 1770 aaPredicted RBP1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 PSME4Q14997 1843 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 KIF13BQ9NQT8 1826 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 MYO5BQ9ULV0 1848 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 GLI2P10070 1586 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 NRCAMQ92823 1304 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 ARHGEF28Q8N1W1 1705 aaKnown RBP1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 MLH3Q9UHC1 1453 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 TSPOAP1O95153 1857 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 KDM6BO15054 1643 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 PHRF1Q9P1Y6 1649 aaKnown RBP1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 NFAT5O94916 1531 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 CPS1P31327 1500 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 MAGI3Q5TCQ9 1506 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 PIK3C2AO00443 1686 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 RIMS1Q86UR5 1692 aaKnown RBP1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 A0A0A6YYH2 397 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 IGKV1-6A0A0C4DH72 117 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 A6NJ64 397 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 METTL15A6NJ78 407 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 LEUTXA8MZ59 168 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 C16orf90A8MZG2 172 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 C1orf196B1AJZ1 125 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 J3QRK9 145 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 M0R1B8 84 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 MFNGO00587 321 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 TCAPO15273 167 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 ORC5O43913 435 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 FADS1O60427 444 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 GGCTO75223 188 aaKnown RBP1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 NSA2O95478 260 aaKnown RBP1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 IGKV1-39P01597 117 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 C1QBP02746 253 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 IGKV1D-39P04432 117 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 FBP1P09467 338 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 OR4E1P0C645 316 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 LINC00614P0C842 121 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms