RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 MMP23AO75900 390 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 HAND1O96004 215 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 SERPINA3P01011 423 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 CST1P01037 141 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 IGLV1-47P01700 117 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 ANXA8P13928 327 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 CCL1P22362 96 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 CD24P25063 80 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 CD34P28906 385 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 CEACAM3P40198 252 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 MYCNOSP40205 109 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 PRRX1P54821 245 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 CDC42P60953 191 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 MS4A2Q01362 244 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 MFGE8Q08431 387 aaPredicted RBP3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 APOFQ13790 326 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 ZNF146Q15072 292 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 UBE2V2Q15819 145 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 GRK1Q15835 563 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 SNAPC1Q16533 368 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 ABCA11PQ4W5N1 156 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 SPIN3Q5JUX0 258 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 BCL2L15Q5TBC7 163 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 GGNBP1Q5YKI7 109 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 ZNF322Q6U7Q0 402 aaPredicted RBP3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 C10orf99Q6UWK7 81 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 UNQ9370/PRO34162Q6UXP9 181 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 HEPN1Q6WQI6 88 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 SLC25A26Q70HW3 274 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 TMEM179BQ7Z7N9 219 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 Q8IYB0 196 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 BATF2Q8N1L9 274 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 ABHD12Q8N2K0 398 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 OSR2Q8N2R0 312 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 CCDC54Q8NEL0 328 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 TRMT10AQ8TBZ6 339 aaKnown RBP3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 CHPT1Q8WUD6 406 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 CORO2AQ92828 525 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 C10orf35Q96D05 121 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 APOL4Q9BPW4 351 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 CHID1Q9BWS9 393 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 GAL3ST2Q9H3Q3 398 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 SLC25A19Q9HC21 320 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 TAS2R3Q9NYW6 316 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 TVP23BQ9NYZ1 205 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 GLS2Q9UI32 602 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 OR52A1Q9UKL2 312 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 IKZF2Q9UKS7 526 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 HSF4Q9ULV5 492 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 COPS3Q9UNS2 423 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 ARL2BPQ9Y2Y0 163 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 R4GMQ9 66 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 U3KQK5 164 aa3.09□□□□□ -1.91
SNRNP40-205ENST00000486941 TRGV10A0A0A0MS01 117 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 TRBV2A0A0J9YWF9 115 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 FUOMA2VDF0 154 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 PSMB11A5LHX3 300 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 A6NIN4 97 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 ZNF670-ZNF695F2Z2N8 137 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 H0YHG0 523 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 LY6LH3BQJ8 138 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 BUB1B-PAK6H3BSN5 160 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 GNGT2O14610 69 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 TOR1AO14656 332 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 SH2D1BO14796 132 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 MAGEB4O15481 346 aaPredicted RBP3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 SYT7O43581 403 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 GATBO75879 557 aaKnown RBP3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 DCTN3O75935 186 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 CYB5AP00167 134 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 MRPL3P09001 348 aaKnown RBP3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 PRKACGP22612 351 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 GABRR1P24046 479 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 CDK2P24941 298 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 MNDAP41218 407 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 OR3A4PP47883 348 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 NPBWR2P48146 333 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 RBP2P50120 134 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 CRISP1P54107 249 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 ATP1B3P54709 279 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 CXCR4P61073 352 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 RPL23AP62750 156 aaKnown RBP3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 CBX1P83916 185 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 EDDM3AQ14507 147 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 HLA-DRB5Q30154 266 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 C9orf152Q5JTZ5 239 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 TPTE2P1Q5T6R2 138 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 NXNL2Q5VZ03 156 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 TMEM236Q5W0B7 351 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 OR2W3Q7Z3T1 314 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 TRAPPC6BQ86SZ2 158 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 CATSPERDQ86XM0 798 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 AQP12AQ8IXF9 295 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 SLC35F2Q8IXU6 374 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 FAM58AQ8N1B3 248 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 COMMD1Q8N668 190 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 TPRX1Q8N7U7 411 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 DNAJC9Q8WXX5 260 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 PP6455Q8WZ26 134 aa3.08□□□□□ -1.92
SNRNP40-205ENST00000486941 EMG1Q92979 244 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms