RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 ATG2AQ2TAZ0 1938 aa10.58□□□□□ -0.72
HSPG2-211ENST00000486901 MAP1LC3B2A6NCE7 125 aa10.58□□□□□ -0.72
HSPG2-211ENST00000486901 SIRPB1O00241 398 aa10.58□□□□□ -0.72
HSPG2-211ENST00000486901 CLDN1O95832 211 aa10.58□□□□□ -0.72
HSPG2-211ENST00000486901 KRASP01116 189 aa10.58□□□□□ -0.72
HSPG2-211ENST00000486901 VDAC1P21796 283 aa10.58□□□□□ -0.72
HSPG2-211ENST00000486901 EIF3IQ13347 325 aaKnown RBP10.58□□□□□ -0.72
HSPG2-211ENST00000486901 C3AR1Q16581 482 aa10.58□□□□□ -0.72
HSPG2-211ENST00000486901 REC114Q7Z4M0 266 aa10.58□□□□□ -0.72
HSPG2-211ENST00000486901 C17orf82Q86X59 251 aaPredicted RBP10.58□□□□□ -0.72
HSPG2-211ENST00000486901 CCDC74BQ96LY2 380 aa10.58□□□□□ -0.72
HSPG2-211ENST00000486901 MAP1LC3BQ9GZQ8 125 aa10.58□□□□□ -0.72
HSPG2-211ENST00000486901 UBE2ZQ9H832 354 aaPredicted RBP10.58□□□□□ -0.72
HSPG2-211ENST00000486901 MTCH1Q9NZJ7 389 aa10.58□□□□□ -0.72
HSPG2-211ENST00000486901 CEP295Q9C0D2 2601 aa10.58□□□□□ -0.72
HSPG2-211ENST00000486901 ZNF737O75373 536 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 CDS2O95674 445 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 IGKV1D-33P01593 117 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 IGKV1-33P01594 117 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 CRYGSP22914 178 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 PKIAP61925 76 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 H3F3AP84243 136 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 LTC4SQ16873 150 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 FAM27BQ5VT28 67 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 NCR3LG1Q68D85 454 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 SYT13Q7L8C5 426 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 GNPNAT1Q96EK6 184 aaPredicted RBP10.57□□□□□ -0.72
HSPG2-211ENST00000486901 OR4C12Q96R67 309 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 SPIN2AQ99865 258 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 SPIN2BQ9BPZ2 258 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 SLC39A9Q9NUM3 307 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 NOSIPQ9Y314 301 aaKnown RBP10.57□□□□□ -0.72
HSPG2-211ENST00000486901 CACNA1BQ00975 2339 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 A6NNC1 897 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 CD300LBA8K4G0 201 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 TCAPO15273 167 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 SLC31A2O15432 143 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 RHBDL1O75783 438 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 OTX1P32242 354 aaPredicted RBP10.57□□□□□ -0.72
HSPG2-211ENST00000486901 CEBPDP49716 269 aaPredicted RBP10.57□□□□□ -0.72
HSPG2-211ENST00000486901 ZFP36L1Q07352 338 aaKnown RBP10.57□□□□□ -0.72
HSPG2-211ENST00000486901 PRDX4Q13162 271 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 KCNMB1Q16558 191 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.57□□□□□ -0.72
HSPG2-211ENST00000486901 C1QTNF9BB2RNN3 333 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 ZNF816Q0VGE8 651 aaPredicted RBP10.57□□□□□ -0.72
HSPG2-211ENST00000486901 RAB35Q15286 201 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 NMSQ5H8A3 153 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 WDR5BQ86VZ2 330 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 ZNF295-AS1Q8N0V1 137 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 LRTM2Q8N967 370 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 SMRP1Q8NCR6 262 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 OR2H1Q9GZK4 316 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 TMEM38BQ9NVV0 291 aa10.57□□□□□ -0.72
HSPG2-211ENST00000486901 A0A1B0GU03 582 aa10.56□□□□□ -0.72
HSPG2-211ENST00000486901 FUT6P51993 359 aa10.56□□□□□ -0.72
HSPG2-211ENST00000486901 Q3ZCU0 254 aa10.56□□□□□ -0.72
HSPG2-211ENST00000486901 OR10A7Q8NGE5 316 aa10.56□□□□□ -0.72
HSPG2-211ENST00000486901 TMEM54Q969K7 222 aa10.56□□□□□ -0.72
HSPG2-211ENST00000486901 PRRG4Q9BZD6 226 aa10.56□□□□□ -0.72
HSPG2-211ENST00000486901 hCG_38984A0A1B0GV85 526 aa10.56□□□□□ -0.72
HSPG2-211ENST00000486901 C9J4A7 227 aa10.56□□□□□ -0.72
HSPG2-211ENST00000486901 ID3Q02535 119 aa10.56□□□□□ -0.72
HSPG2-211ENST00000486901 ZNF124Q15973 351 aa10.56□□□□□ -0.72
HSPG2-211ENST00000486901 GCSAMLQ5JQS6 135 aa10.56□□□□□ -0.72
HSPG2-211ENST00000486901 HAPLN4Q86UW8 402 aa10.56□□□□□ -0.72
HSPG2-211ENST00000486901 CXorf67Q86X51 503 aaPredicted RBP10.56□□□□□ -0.72
HSPG2-211ENST00000486901 IER2Q9BTL4 223 aa10.56□□□□□ -0.72
HSPG2-211ENST00000486901 IGHV5-10-1A0A0J9YXX1 117 aa10.56□□□□□ -0.72
HSPG2-211ENST00000486901 GRIFINA4D1Z8 144 aa10.56□□□□□ -0.72
HSPG2-211ENST00000486901 H7BYZ3 331 aa10.56□□□□□ -0.72
HSPG2-211ENST00000486901 ST8SIA5O15466 376 aa10.56□□□□□ -0.72
HSPG2-211ENST00000486901 LIFP15018 202 aa10.56□□□□□ -0.72
HSPG2-211ENST00000486901 GALR1P47211 349 aa10.56□□□□□ -0.72
HSPG2-211ENST00000486901 RPL29P47914 159 aaKnown RBP10.56□□□□□ -0.72
HSPG2-211ENST00000486901 OR10D3Q8NH80 312 aa10.56□□□□□ -0.72
HSPG2-211ENST00000486901 SDF2L1Q9HCN8 221 aa10.56□□□□□ -0.72
HSPG2-211ENST00000486901 CLN8Q9UBY8 286 aa10.56□□□□□ -0.72
HSPG2-211ENST00000486901 HEATR1Q9H583 2144 aaKnown RBP10.55□□□□□ -0.72
HSPG2-211ENST00000486901 ZNF503-AS2A6NEH8 195 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 CTSSP25774 331 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 TCF23Q7RTU1 214 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 SLC35E3Q7Z769 313 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 MCEMP1Q8IX19 187 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 IFI44Q8TCB0 444 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 OR5P3Q8WZ94 311 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 PSMF1Q92530 271 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 FAM234AQ9H0X4 552 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 PROK2Q9HC23 129 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 PRSS50Q9UI38 385 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 SIT1Q9Y3P8 196 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 ZNF705FA8MVS1 300 aaPredicted RBP10.55□□□□□ -0.72
HSPG2-211ENST00000486901 PPP5D1E7EU14 171 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 TRAPPC2LH3BP13 241 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 SPINK4O60575 86 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 CYB5R3P00387 301 aaPredicted RBP10.55□□□□□ -0.72
HSPG2-211ENST00000486901 ZNF705DP0CH99 300 aaPredicted RBP10.55□□□□□ -0.72
HSPG2-211ENST00000486901 ZNF705BP0CI00 300 aaPredicted RBP10.55□□□□□ -0.72
HSPG2-211ENST00000486901 F2RP25116 425 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 C10orf128Q5T292 105 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms