RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 KIR2DL2P43627 348 aaPredicted RBP15.19■□□□□ 0.02
PDLIM7-207ENST00000486828 PAX9P55771 341 aa15.19■□□□□ 0.02
PDLIM7-207ENST00000486828 LFNGQ8NES3 379 aa15.19■□□□□ 0.02
PDLIM7-207ENST00000486828 EIF5A2Q9GZV4 153 aaKnown RBP15.19■□□□□ 0.02
PDLIM7-207ENST00000486828 HES4Q9HCC6 221 aa15.19■□□□□ 0.02
PDLIM7-207ENST00000486828 CELSR3Q9NYQ7 3312 aa15.19■□□□□ 0.02
PDLIM7-207ENST00000486828 TRAV17A0A0B4J275 112 aa15.19■□□□□ 0.02
PDLIM7-207ENST00000486828 TSPAN9O75954 239 aa15.19■□□□□ 0.02
PDLIM7-207ENST00000486828 EPHA1P21709 976 aa15.19■□□□□ 0.02
PDLIM7-207ENST00000486828 HOXC12P31275 282 aa15.19■□□□□ 0.02
PDLIM7-207ENST00000486828 B2MP61769 119 aa15.19■□□□□ 0.02
PDLIM7-207ENST00000486828 FIP1L1Q6UN15 594 aaKnown RBP15.19■□□□□ 0.02
PDLIM7-207ENST00000486828 WDR31Q8NA23 367 aa15.19■□□□□ 0.02
PDLIM7-207ENST00000486828 C1orf162Q8NEQ5 155 aaPredicted RBP15.19■□□□□ 0.02
PDLIM7-207ENST00000486828 LSM10Q969L4 123 aaKnown RBP15.19■□□□□ 0.02
PDLIM7-207ENST00000486828 PBDC1Q9BVG4 233 aa15.19■□□□□ 0.02
PDLIM7-207ENST00000486828 IGHV3-64DA0A0J9YX35 117 aa15.18■□□□□ 0.02
PDLIM7-207ENST00000486828 KIAA1324LA8MWY0 1029 aaPredicted RBP15.18■□□□□ 0.02
PDLIM7-207ENST00000486828 HAND1O96004 215 aa15.18■□□□□ 0.02
PDLIM7-207ENST00000486828 IGKV1-39P01597 117 aa15.18■□□□□ 0.02
PDLIM7-207ENST00000486828 IGKV1D-39P04432 117 aa15.18■□□□□ 0.02
PDLIM7-207ENST00000486828 WT1P19544 449 aaPredicted RBP15.18■□□□□ 0.02
PDLIM7-207ENST00000486828 VWA1Q6PCB0 445 aa15.18■□□□□ 0.02
PDLIM7-207ENST00000486828 C9orf106Q8NAJ2 232 aa15.18■□□□□ 0.02
PDLIM7-207ENST00000486828 OR8G5Q8NG78 346 aa15.18■□□□□ 0.02
PDLIM7-207ENST00000486828 OR10Z1Q8NGY1 313 aa15.18■□□□□ 0.02
PDLIM7-207ENST00000486828 OBP2BQ9NPH6 170 aa15.18■□□□□ 0.02
PDLIM7-207ENST00000486828 AKAP13Q12802 2813 aa15.18■□□□□ 0.02
PDLIM7-207ENST00000486828 A0A1B0GW64 132 aa15.17■□□□□ 0.02
PDLIM7-207ENST00000486828 PPP1CCP36873 323 aaKnown RBP15.17■□□□□ 0.02
PDLIM7-207ENST00000486828 TMEM217Q8N7C4 229 aa15.17■□□□□ 0.02
PDLIM7-207ENST00000486828 KDF1Q8NAX2 398 aaPredicted RBP15.17■□□□□ 0.02
PDLIM7-207ENST00000486828 RNASE11Q8TAA1 199 aaKnown RBP15.17■□□□□ 0.02
PDLIM7-207ENST00000486828 SARAFQ96BY9 339 aa15.17■□□□□ 0.02
PDLIM7-207ENST00000486828 GNPNAT1Q96EK6 184 aaPredicted RBP15.17■□□□□ 0.02
PDLIM7-207ENST00000486828 LIN7CQ9NUP9 197 aaKnown RBP15.17■□□□□ 0.02
PDLIM7-207ENST00000486828 MLXQ9UH92 298 aa15.17■□□□□ 0.02
PDLIM7-207ENST00000486828 TINAGQ9UJW2 476 aa15.17■□□□□ 0.02
PDLIM7-207ENST00000486828 PPP1R3CQ9UQK1 317 aa15.17■□□□□ 0.02
PDLIM7-207ENST00000486828 PRELID3BQ9Y3B1 194 aa15.17■□□□□ 0.02
PDLIM7-207ENST00000486828 RBM7Q9Y580 266 aaKnown RBP15.17■□□□□ 0.02
PDLIM7-207ENST00000486828 RFNGQ9Y644 331 aa15.17■□□□□ 0.02
PDLIM7-207ENST00000486828 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.17■□□□□ 0.02
PDLIM7-207ENST00000486828 MED19A0JLT2 244 aaPredicted RBP15.17■□□□□ 0.02
PDLIM7-207ENST00000486828 MLNRO43193 412 aa15.17■□□□□ 0.02
PDLIM7-207ENST00000486828 AGFG2O95081 481 aa15.17■□□□□ 0.02
PDLIM7-207ENST00000486828 CEACAM6P40199 344 aa15.17■□□□□ 0.02
PDLIM7-207ENST00000486828 RPL23AP62750 156 aaKnown RBP15.17■□□□□ 0.02
PDLIM7-207ENST00000486828 SNIP1Q8TAD8 396 aaKnown RBP15.17■□□□□ 0.02
PDLIM7-207ENST00000486828 RAB40CQ96S21 281 aa15.17■□□□□ 0.02
PDLIM7-207ENST00000486828 ATP5SQ99766 215 aa15.17■□□□□ 0.02
PDLIM7-207ENST00000486828 KCNS2Q9ULS6 477 aa15.17■□□□□ 0.02
PDLIM7-207ENST00000486828 Q6ZRM9 215 aa15.16■□□□□ 0.02
PDLIM7-207ENST00000486828 ZNF295-AS1Q8N0V1 137 aa15.16■□□□□ 0.02
PDLIM7-207ENST00000486828 UBALD1Q8TB05 177 aa15.16■□□□□ 0.02
PDLIM7-207ENST00000486828 CXXC4Q9H2H0 198 aa15.16■□□□□ 0.02
PDLIM7-207ENST00000486828 SMCO4Q9NRQ5 59 aa15.16■□□□□ 0.02
PDLIM7-207ENST00000486828 OR14J1Q9UGF5 321 aa15.16■□□□□ 0.02
PDLIM7-207ENST00000486828 C1QTNF9BB2RNN3 333 aa15.15■□□□□ 0.02
PDLIM7-207ENST00000486828 TXNL1O43396 289 aa15.15■□□□□ 0.02
PDLIM7-207ENST00000486828 CD200P41217 278 aa15.15■□□□□ 0.02
PDLIM7-207ENST00000486828 CEBPDP49716 269 aaPredicted RBP15.15■□□□□ 0.02
PDLIM7-207ENST00000486828 STX12Q86Y82 276 aa15.15■□□□□ 0.02
PDLIM7-207ENST00000486828 C11orf53Q8IXP5 236 aa15.15■□□□□ 0.02
PDLIM7-207ENST00000486828 TMEM30CPA0ZSE6 113 aa15.15■□□□□ 0.02
PDLIM7-207ENST00000486828 PSPNO60542 156 aa15.15■□□□□ 0.02
PDLIM7-207ENST00000486828 DFFBO76075 338 aa15.15■□□□□ 0.02
PDLIM7-207ENST00000486828 IGKV1-5P01602 117 aa15.15■□□□□ 0.02
PDLIM7-207ENST00000486828 TUBG1P23258 451 aa15.15■□□□□ 0.02
PDLIM7-207ENST00000486828 SULT1A1P50225 295 aa15.15■□□□□ 0.02
PDLIM7-207ENST00000486828 IZUMO4Q1ZYL8 232 aa15.15■□□□□ 0.02
PDLIM7-207ENST00000486828 ZNF585BQ52M93 769 aa15.15■□□□□ 0.02
PDLIM7-207ENST00000486828 DRAM1Q8N682 238 aa15.15■□□□□ 0.02
PDLIM7-207ENST00000486828 ABHD14AQ9BUJ0 271 aa15.15■□□□□ 0.02
PDLIM7-207ENST00000486828 SLC35B3Q9H1N7 401 aa15.15■□□□□ 0.02
PDLIM7-207ENST00000486828 TUBG2Q9NRH3 451 aa15.15■□□□□ 0.02
PDLIM7-207ENST00000486828 KCNIP1Q9NZI2 227 aa15.15■□□□□ 0.02
PDLIM7-207ENST00000486828 CACNG5Q9UF02 275 aa15.15■□□□□ 0.02
PDLIM7-207ENST00000486828 FBXO7Q9Y3I1 522 aa15.15■□□□□ 0.02
PDLIM7-207ENST00000486828 WSB1Q9Y6I7 421 aa15.15■□□□□ 0.02
PDLIM7-207ENST00000486828 WDR1O75083 606 aa15.14■□□□□ 0.01
PDLIM7-207ENST00000486828 PAX6P26367 422 aa15.14■□□□□ 0.01
PDLIM7-207ENST00000486828 ACSF3Q4G176 576 aaPredicted RBP15.14■□□□□ 0.01
PDLIM7-207ENST00000486828 RXFP4Q8TDU9 374 aa15.14■□□□□ 0.01
PDLIM7-207ENST00000486828 SMDT1Q9H4I9 107 aa15.14■□□□□ 0.01
PDLIM7-207ENST00000486828 PLSCR4Q9NRQ2 329 aa15.14■□□□□ 0.01
PDLIM7-207ENST00000486828 A0A1B0GV50 99 aa15.13■□□□□ 0.01
PDLIM7-207ENST00000486828 MEX3AA1L020 520 aaKnown RBP15.13■□□□□ 0.01
PDLIM7-207ENST00000486828 BTBD17A6NE02 478 aa15.13■□□□□ 0.01
PDLIM7-207ENST00000486828 WNT9BO14905 357 aa15.13■□□□□ 0.01
PDLIM7-207ENST00000486828 CECR9P0C854 216 aa15.13■□□□□ 0.01
PDLIM7-207ENST00000486828 ZNF16P17020 682 aaPredicted RBP15.13■□□□□ 0.01
PDLIM7-207ENST00000486828 KITLGP21583 273 aa15.13■□□□□ 0.01
PDLIM7-207ENST00000486828 FOXF2Q12947 444 aa15.13■□□□□ 0.01
PDLIM7-207ENST00000486828 SLC35E4Q6ICL7 350 aa15.13■□□□□ 0.01
PDLIM7-207ENST00000486828 SPSB3Q6PJ21 355 aa15.13■□□□□ 0.01
PDLIM7-207ENST00000486828 ETV3LQ6ZN32 361 aa15.13■□□□□ 0.01
PDLIM7-207ENST00000486828 ZNF826PQ6ZT77 177 aa15.13■□□□□ 0.01
PDLIM7-207ENST00000486828 CXorf67Q86X51 503 aaPredicted RBP15.13■□□□□ 0.01
PDLIM7-207ENST00000486828 COLCA2A8K830 154 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms