RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 STOML3Q8TAV4 291 aa2.18□□□□□ -2.06
SMC4-218ENST00000486711 C7orf50Q9BRJ6 194 aaKnown RBP2.18□□□□□ -2.06
SMC4-218ENST00000486711 TMEM208Q9BTX3 173 aa2.18□□□□□ -2.06
SMC4-218ENST00000486711 C11orf49Q9H6J7 331 aa2.18□□□□□ -2.06
SMC4-218ENST00000486711 VPREB3Q9UKI3 123 aa2.18□□□□□ -2.06
SMC4-218ENST00000486711 FIS1Q9Y3D6 152 aa2.18□□□□□ -2.06
SMC4-218ENST00000486711 NUP153P49790 1475 aaKnown RBP2.18□□□□□ -2.06
SMC4-218ENST00000486711 NACADO15069 1562 aa2.18□□□□□ -2.06
SMC4-218ENST00000486711 PRR14LQ5THK1 2151 aa2.17□□□□□ -2.06
SMC4-218ENST00000486711 PTPRKQ15262 1439 aa2.17□□□□□ -2.06
SMC4-218ENST00000486711 GOLGA6L10A6NI86 522 aa2.17□□□□□ -2.06
SMC4-218ENST00000486711 FTCDNL1E5RQL4 147 aa2.17□□□□□ -2.06
SMC4-218ENST00000486711 GOLGA8RI6L899 631 aa2.17□□□□□ -2.06
SMC4-218ENST00000486711 ZNF22P17026 224 aaPredicted RBP2.17□□□□□ -2.06
SMC4-218ENST00000486711 CFL1P23528 166 aaKnown RBP2.17□□□□□ -2.06
SMC4-218ENST00000486711 PSMB6P28072 239 aa2.17□□□□□ -2.06
SMC4-218ENST00000486711 OR8G1Q15617 311 aa2.17□□□□□ -2.06
SMC4-218ENST00000486711 TRMT12Q53H54 448 aaKnown RBP2.17□□□□□ -2.06
SMC4-218ENST00000486711 HES3Q5TGS1 186 aa2.17□□□□□ -2.06
SMC4-218ENST00000486711 SDHAF4Q5VUM1 108 aa2.17□□□□□ -2.06
SMC4-218ENST00000486711 XKRXQ6PP77 449 aa2.17□□□□□ -2.06
SMC4-218ENST00000486711 PLEKHG7Q6ZR37 379 aa2.17□□□□□ -2.06
SMC4-218ENST00000486711 OR5L1Q8NGL2 311 aa2.17□□□□□ -2.06
SMC4-218ENST00000486711 GPR22Q99680 433 aa2.17□□□□□ -2.06
SMC4-218ENST00000486711 MED18Q9BUE0 208 aa2.17□□□□□ -2.06
SMC4-218ENST00000486711 GTSF1LQ9H1H1 148 aa2.17□□□□□ -2.06
SMC4-218ENST00000486711 UBQLN4Q9NRR5 601 aa2.17□□□□□ -2.06
SMC4-218ENST00000486711 LINC00527Q9UJ94 153 aa2.17□□□□□ -2.06
SMC4-218ENST00000486711 SNX10Q9Y5X0 201 aa2.17□□□□□ -2.06
SMC4-218ENST00000486711 A0A1W2PNM2 257 aa2.16□□□□□ -2.06
SMC4-218ENST00000486711 A8MWP6 167 aa2.16□□□□□ -2.06
SMC4-218ENST00000486711 G3V3Q6 166 aa2.16□□□□□ -2.06
SMC4-218ENST00000486711 CCRL2O00421 344 aa2.16□□□□□ -2.06
SMC4-218ENST00000486711 ARL6IP5O75915 188 aa2.16□□□□□ -2.06
SMC4-218ENST00000486711 OR4A8P0C604 315 aa2.16□□□□□ -2.06
SMC4-218ENST00000486711 PPP1CCP36873 323 aaKnown RBP2.16□□□□□ -2.06
SMC4-218ENST00000486711 PSMB3P49720 205 aa2.16□□□□□ -2.06
SMC4-218ENST00000486711 TNFRSF9Q07011 255 aa2.16□□□□□ -2.06
SMC4-218ENST00000486711 SPIN4Q56A73 249 aa2.16□□□□□ -2.06
SMC4-218ENST00000486711 SCGB1D4Q6XE38 83 aa2.16□□□□□ -2.06
SMC4-218ENST00000486711 MSRB3Q8IXL7 192 aa2.16□□□□□ -2.06
SMC4-218ENST00000486711 NATD1Q8N6N6 113 aa2.16□□□□□ -2.06
SMC4-218ENST00000486711 OR51H1Q8NH63 302 aa2.16□□□□□ -2.06
SMC4-218ENST00000486711 GPR119Q8TDV5 335 aa2.16□□□□□ -2.06
SMC4-218ENST00000486711 LMX1AQ8TE12 382 aa2.16□□□□□ -2.06
SMC4-218ENST00000486711 LRRC19Q9H756 370 aa2.16□□□□□ -2.06
SMC4-218ENST00000486711 DNAJC12Q9UKB3 198 aa2.16□□□□□ -2.06
SMC4-218ENST00000486711 PUS1Q9Y606 427 aaKnown RBP eCLIP2.16□□□□□ -2.06
SMC4-218ENST00000486711 IGKV1-12A0A0C4DH73 117 aa2.15□□□□□ -2.07
SMC4-218ENST00000486711 FABP12A6NFH5 140 aa2.15□□□□□ -2.07
SMC4-218ENST00000486711 ZW10O43264 779 aa2.15□□□□□ -2.07
SMC4-218ENST00000486711 CRTAPO75718 401 aaPredicted RBP2.15□□□□□ -2.07
SMC4-218ENST00000486711 IGKV1D-12P01611 117 aa2.15□□□□□ -2.07
SMC4-218ENST00000486711 HBZP02008 142 aa2.15□□□□□ -2.07
SMC4-218ENST00000486711 CD99P14209 185 aa2.15□□□□□ -2.07
SMC4-218ENST00000486711 ORM2P19652 201 aa2.15□□□□□ -2.07
SMC4-218ENST00000486711 GRPRP30550 384 aa2.15□□□□□ -2.07
SMC4-218ENST00000486711 DEFA6Q01524 100 aa2.15□□□□□ -2.07
SMC4-218ENST00000486711 SCXQ7RTU7 201 aa2.15□□□□□ -2.07
SMC4-218ENST00000486711 FUNDC1Q8IVP5 155 aa2.15□□□□□ -2.07
SMC4-218ENST00000486711 FAM9CQ8IZT9 166 aa2.15□□□□□ -2.07
SMC4-218ENST00000486711 OR10D4PQ8NGN7 298 aa2.15□□□□□ -2.07
SMC4-218ENST00000486711 OR4K13Q8NH42 304 aa2.15□□□□□ -2.07
SMC4-218ENST00000486711 CD200R1Q8TD46 325 aa2.15□□□□□ -2.07
SMC4-218ENST00000486711 TNFAIP8L1Q8WVP5 186 aa2.15□□□□□ -2.07
SMC4-218ENST00000486711 ZNF514Q96K75 400 aaPredicted RBP2.15□□□□□ -2.07
SMC4-218ENST00000486711 EIF5A2Q9GZV4 153 aaKnown RBP2.15□□□□□ -2.07
SMC4-218ENST00000486711 WDR54Q9H977 334 aa2.15□□□□□ -2.07
SMC4-218ENST00000486711 SPANXB1Q9NS25 103 aaPredicted RBP2.15□□□□□ -2.07
SMC4-218ENST00000486711 TAS2R9Q9NYW1 312 aa2.15□□□□□ -2.07
SMC4-218ENST00000486711 ALG5Q9Y673 324 aa2.15□□□□□ -2.07
SMC4-218ENST00000486711 CLUHO75153 1309 aa2.15□□□□□ -2.07
SMC4-218ENST00000486711 SDK2Q58EX2 2172 aa2.15□□□□□ -2.07
SMC4-218ENST00000486711 METTL15A6NJ78 407 aa2.14□□□□□ -2.07
SMC4-218ENST00000486711 J3QRE1 110 aa2.14□□□□□ -2.07
SMC4-218ENST00000486711 STX10O60499 249 aa2.14□□□□□ -2.07
SMC4-218ENST00000486711 STK16O75716 305 aa2.14□□□□□ -2.07
SMC4-218ENST00000486711 TPM3P06753 285 aa2.14□□□□□ -2.07
SMC4-218ENST00000486711 NQO1P15559 274 aaKnown RBP2.14□□□□□ -2.07
SMC4-218ENST00000486711 CBR1P16152 277 aa2.14□□□□□ -2.07
SMC4-218ENST00000486711 CD40LGP29965 261 aa2.14□□□□□ -2.07
SMC4-218ENST00000486711 UBE2G2P60604 165 aa2.14□□□□□ -2.07
SMC4-218ENST00000486711 ACTBP60709 375 aa2.14□□□□□ -2.07
SMC4-218ENST00000486711 DAD1P61803 113 aa2.14□□□□□ -2.07
SMC4-218ENST00000486711 ACTG1P63261 375 aa2.14□□□□□ -2.07
SMC4-218ENST00000486711 TPM4P67936 248 aa2.14□□□□□ -2.07
SMC4-218ENST00000486711 SLC35A2P78381 396 aa2.14□□□□□ -2.07
SMC4-218ENST00000486711 BSPH1Q075Z2 132 aa2.14□□□□□ -2.07
SMC4-218ENST00000486711 YIPF7Q8N8F6 280 aa2.14□□□□□ -2.07
SMC4-218ENST00000486711 OR10P1Q8NGE3 313 aa2.14□□□□□ -2.07
SMC4-218ENST00000486711 CYGBQ8WWM9 190 aa2.14□□□□□ -2.07
SMC4-218ENST00000486711 ZNF426Q9BUY5 554 aa2.14□□□□□ -2.07
SMC4-218ENST00000486711 UPF3BQ9BZI7 483 aaKnown RBP2.14□□□□□ -2.07
SMC4-218ENST00000486711 EURLQ9NYK6 297 aa2.14□□□□□ -2.07
SMC4-218ENST00000486711 LTBP4Q8N2S1 1624 aa2.13□□□□□ -2.07
SMC4-218ENST00000486711 CACNA1DQ01668 2161 aa2.13□□□□□ -2.07
SMC4-218ENST00000486711 C1orf232A0A0U1RR37 186 aa2.13□□□□□ -2.07
SMC4-218ENST00000486711 IGSF23A1L1A6 192 aa2.13□□□□□ -2.07
SMC4-218ENST00000486711 SDHAF1A6NFY7 115 aa2.13□□□□□ -2.07
SMC4-218ENST00000486711 COPEO14579 308 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms