RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 WASHC3Q9Y3C0 194 aa1.12□□□□□ -2.23
GCFC2-209ENST00000486016 ZNF337Q9Y3M9 751 aa1.12□□□□□ -2.23
GCFC2-209ENST00000486016 LTBP2Q14767 1821 aa1.12□□□□□ -2.23
GCFC2-209ENST00000486016 SHANK3Q9BYB0 1731 aa1.12□□□□□ -2.23
GCFC2-209ENST00000486016 LOC102725191A0A1B0GVB3 256 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 ERICH2A1L162 156 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 ERICH4A6NGS2 130 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 TRPC5OSA6NMA1 111 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 A8MWP6 167 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 F5H5K5 113 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 F5H5T6 163 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 M0QX08 132 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 CYTH3O43739 400 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 SYNGR1O43759 233 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 NEMFO60524 1076 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 SCN2BO60939 215 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 ASS1P00966 412 aaKnown RBP1.11□□□□□ -2.23
GCFC2-209ENST00000486016 CRYGDP07320 174 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 FBP1P09467 338 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 GZMHP20718 246 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 GADD45AP24522 165 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 SULT1A2P50226 295 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 STC1P52823 247 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 SPIN4Q56A73 249 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 TIMM23BQ5SRD1 257 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 KRTAP5-10Q6L8G5 202 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 ZNF322Q6U7Q0 402 aaPredicted RBP1.11□□□□□ -2.23
GCFC2-209ENST00000486016 Q6ZRU5 148 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 DOLPP1Q86YN1 238 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 BOD1L2Q8IYS8 172 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 ZNF567Q8N184 647 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 ATP6V1C2Q8NEY4 427 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 OR5C1Q8NGR4 320 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 OR5AK3PQ8NH89 298 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 GPR119Q8TDV5 335 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 UGT2B28Q9BY64 529 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 GTSF1LQ9H1H1 148 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 LRRC19Q9H756 370 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 TUBA4BQ9H853 241 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 C1orf109Q9NX04 203 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 TMEM216Q9P0N5 145 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 SCML1Q9UN30 329 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 NUP153P49790 1475 aaKnown RBP1.11□□□□□ -2.23
GCFC2-209ENST00000486016 COL18A1P39060 1754 aa1.11□□□□□ -2.23
GCFC2-209ENST00000486016 LRPPRCP42704 1394 aaKnown RBP1.1□□□□□ -2.23
GCFC2-209ENST00000486016 KMT2EQ8IZD2 1858 aa1.1□□□□□ -2.23
GCFC2-209ENST00000486016 LINC00854A0A1B0GVQ3 168 aa1.1□□□□□ -2.23
GCFC2-209ENST00000486016 F8VZ95 297 aa1.1□□□□□ -2.23
GCFC2-209ENST00000486016 H3BSA7 217 aa1.1□□□□□ -2.23
GCFC2-209ENST00000486016 M0QYV0 167 aa1.1□□□□□ -2.23
GCFC2-209ENST00000486016 LIN7AO14910 233 aaPredicted RBP1.1□□□□□ -2.23
GCFC2-209ENST00000486016 CRTAPO75718 401 aaPredicted RBP1.1□□□□□ -2.23
GCFC2-209ENST00000486016 OR4A8P0C604 315 aa1.1□□□□□ -2.23
GCFC2-209ENST00000486016 ORM2P19652 201 aa1.1□□□□□ -2.23
GCFC2-209ENST00000486016 PVALBP20472 110 aaPredicted RBP1.1□□□□□ -2.23
GCFC2-209ENST00000486016 CSRP1P21291 193 aaKnown RBP1.1□□□□□ -2.23
GCFC2-209ENST00000486016 PSMB3P49720 205 aa1.1□□□□□ -2.23
GCFC2-209ENST00000486016 KRTAP12-1P59990 96 aa1.1□□□□□ -2.23
GCFC2-209ENST00000486016 HTR4Q13639 388 aa1.1□□□□□ -2.23
GCFC2-209ENST00000486016 PDK2Q15119 407 aa1.1□□□□□ -2.23
GCFC2-209ENST00000486016 ZNHIT3Q15649 155 aaPredicted RBP1.1□□□□□ -2.23
GCFC2-209ENST00000486016 MAPK14Q16539 360 aa1.1□□□□□ -2.23
GCFC2-209ENST00000486016 TRMT12Q53H54 448 aaKnown RBP1.1□□□□□ -2.23
GCFC2-209ENST00000486016 SDIM1Q6ZPB5 146 aa1.1□□□□□ -2.23
GCFC2-209ENST00000486016 Q6ZS52 159 aa1.1□□□□□ -2.23
GCFC2-209ENST00000486016 SLC13A5Q86YT5 568 aaPredicted RBP1.1□□□□□ -2.23
GCFC2-209ENST00000486016 CRLF3Q8IUI8 442 aa1.1□□□□□ -2.23
GCFC2-209ENST00000486016 DNAAF3Q8N9W5 541 aa1.1□□□□□ -2.23
GCFC2-209ENST00000486016 OR4K13Q8NH42 304 aa1.1□□□□□ -2.23
GCFC2-209ENST00000486016 OR5K1Q8NHB7 308 aa1.1□□□□□ -2.23
GCFC2-209ENST00000486016 TAMM41Q96BW9 452 aa1.1□□□□□ -2.23
GCFC2-209ENST00000486016 LRRC45Q96CN5 670 aa1.1□□□□□ -2.23
GCFC2-209ENST00000486016 ATP6V1G3Q96LB4 118 aa1.1□□□□□ -2.23
GCFC2-209ENST00000486016 BBS2Q9BXC9 721 aa1.1□□□□□ -2.23
GCFC2-209ENST00000486016 AICDAQ9GZX7 198 aa1.1□□□□□ -2.23
GCFC2-209ENST00000486016 SPACA1Q9HBV2 294 aa1.1□□□□□ -2.23
GCFC2-209ENST00000486016 CLUHO75153 1309 aa1.1□□□□□ -2.23
GCFC2-209ENST00000486016 DOCK6Q96HP0 2047 aa1.1□□□□□ -2.23
GCFC2-209ENST00000486016 TRPM3Q9HCF6 1732 aaPredicted RBP1.09□□□□□ -2.23
GCFC2-209ENST00000486016 LCTP09848 1927 aa1.09□□□□□ -2.23
GCFC2-209ENST00000486016 ADORA1P30542 326 aa1.09□□□□□ -2.23
GCFC2-209ENST00000486016 PPP1CCP36873 323 aaKnown RBP1.09□□□□□ -2.23
GCFC2-209ENST00000486016 C1DQ13901 141 aaKnown RBP1.09□□□□□ -2.23
GCFC2-209ENST00000486016 EXOC3L4Q17RC7 722 aa1.09□□□□□ -2.23
GCFC2-209ENST00000486016 FAM229BQ4G0N7 80 aa1.09□□□□□ -2.23
GCFC2-209ENST00000486016 BLIDQ8IZY5 108 aa1.09□□□□□ -2.23
GCFC2-209ENST00000486016 TMEM75Q8N9X5 138 aa1.09□□□□□ -2.23
GCFC2-209ENST00000486016 TNFAIP8L1Q8WVP5 186 aa1.09□□□□□ -2.23
GCFC2-209ENST00000486016 CAPZA3Q96KX2 299 aa1.09□□□□□ -2.23
GCFC2-209ENST00000486016 ZNF251Q9BRH9 671 aa1.09□□□□□ -2.23
GCFC2-209ENST00000486016 MED18Q9BUE0 208 aa1.09□□□□□ -2.23
GCFC2-209ENST00000486016 NDEL1Q9GZM8 345 aa1.09□□□□□ -2.23
GCFC2-209ENST00000486016 CHMP4BQ9H444 224 aaKnown RBP1.09□□□□□ -2.23
GCFC2-209ENST00000486016 CD300AQ9UGN4 299 aa1.09□□□□□ -2.23
GCFC2-209ENST00000486016 LINC00527Q9UJ94 153 aa1.09□□□□□ -2.23
GCFC2-209ENST00000486016 CCL26Q9Y258 94 aa1.09□□□□□ -2.23
GCFC2-209ENST00000486016 FIS1Q9Y3D6 152 aa1.09□□□□□ -2.23
GCFC2-209ENST00000486016 HEY1Q9Y5J3 304 aa1.09□□□□□ -2.23
GCFC2-209ENST00000486016 MYO5BQ9ULV0 1848 aa1.09□□□□□ -2.23
GCFC2-209ENST00000486016 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms