RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 TNFRSF19Q9NS68 423 aa12.8□□□□□ -0.36
UPF3A-208ENST00000484246 PITPNC1Q9UKF7 332 aa12.8□□□□□ -0.36
UPF3A-208ENST00000484246 A6NDX4 124 aa12.79□□□□□ -0.36
UPF3A-208ENST00000484246 TSPAN9O75954 239 aa12.79□□□□□ -0.36
UPF3A-208ENST00000484246 GABARAPO95166 117 aa12.79□□□□□ -0.36
UPF3A-208ENST00000484246 PAX6P26367 422 aa12.79□□□□□ -0.36
UPF3A-208ENST00000484246 RAG2P55895 527 aa12.79□□□□□ -0.36
UPF3A-208ENST00000484246 MXD1Q05195 221 aa12.79□□□□□ -0.36
UPF3A-208ENST00000484246 LTC4SQ16873 150 aa12.79□□□□□ -0.36
UPF3A-208ENST00000484246 DHRS7BQ6IAN0 325 aaPredicted RBP12.79□□□□□ -0.36
UPF3A-208ENST00000484246 SLC25A48Q6ZT89 311 aaKnown RBP12.79□□□□□ -0.36
UPF3A-208ENST00000484246 OR8H3Q8N146 312 aa12.79□□□□□ -0.36
UPF3A-208ENST00000484246 LEAP2Q969E1 77 aa12.79□□□□□ -0.36
UPF3A-208ENST00000484246 RANBP3Q9H6Z4 567 aaPredicted RBP12.79□□□□□ -0.36
UPF3A-208ENST00000484246 GNG12Q9UBI6 72 aa12.79□□□□□ -0.36
UPF3A-208ENST00000484246 HILPDAQ9Y5L2 63 aa12.79□□□□□ -0.36
UPF3A-208ENST00000484246 TFAP2AP05549 437 aa12.78□□□□□ -0.36
UPF3A-208ENST00000484246 SNRPBP14678 240 aaKnown RBP12.78□□□□□ -0.36
UPF3A-208ENST00000484246 BRS3P32247 399 aa12.78□□□□□ -0.36
UPF3A-208ENST00000484246 GNG10P50151 68 aa12.78□□□□□ -0.36
UPF3A-208ENST00000484246 RAB7AP51149 207 aa12.78□□□□□ -0.36
UPF3A-208ENST00000484246 HLA-DRB3P79483 266 aa12.78□□□□□ -0.36
UPF3A-208ENST00000484246 ZNF816Q0VGE8 651 aaPredicted RBP12.78□□□□□ -0.36
UPF3A-208ENST00000484246 HABP2Q14520 560 aaPredicted RBP12.78□□□□□ -0.36
UPF3A-208ENST00000484246 C12orf54Q6X4T0 127 aa12.78□□□□□ -0.36
UPF3A-208ENST00000484246 ANKRD13BQ86YJ7 626 aa12.78□□□□□ -0.36
UPF3A-208ENST00000484246 OR10X1Q8NGY0 326 aa12.78□□□□□ -0.36
UPF3A-208ENST00000484246 UBALD1Q8TB05 177 aa12.78□□□□□ -0.36
UPF3A-208ENST00000484246 ST6GALNAC6Q969X2 333 aa12.78□□□□□ -0.36
UPF3A-208ENST00000484246 RPEQ96AT9 228 aa12.78□□□□□ -0.36
UPF3A-208ENST00000484246 GALMQ96C23 342 aa12.78□□□□□ -0.36
UPF3A-208ENST00000484246 SLC25A38Q96DW6 304 aa12.78□□□□□ -0.36
UPF3A-208ENST00000484246 CMSS1Q9BQ75 279 aaKnown RBP12.78□□□□□ -0.36
UPF3A-208ENST00000484246 HDHD3Q9BSH5 251 aaPredicted RBP12.78□□□□□ -0.36
UPF3A-208ENST00000484246 C16orf95Q9H693 158 aa12.78□□□□□ -0.36
UPF3A-208ENST00000484246 CHMP1AQ9HD42 196 aaPredicted RBP12.78□□□□□ -0.36
UPF3A-208ENST00000484246 Q9N2K0 584 aa12.78□□□□□ -0.36
UPF3A-208ENST00000484246 RHBDL2Q9NX52 303 aa12.78□□□□□ -0.36
UPF3A-208ENST00000484246 PLA2G2EQ9NZK7 142 aa12.78□□□□□ -0.36
UPF3A-208ENST00000484246 ABRACLQ9P1F3 81 aa12.78□□□□□ -0.36
UPF3A-208ENST00000484246 A0A0A6YYH2 397 aa12.77□□□□□ -0.37
UPF3A-208ENST00000484246 A0A1W2PPI3 338 aa12.77□□□□□ -0.37
UPF3A-208ENST00000484246 A6NJ64 397 aa12.77□□□□□ -0.37
UPF3A-208ENST00000484246 CHST1O43916 411 aa12.77□□□□□ -0.37
UPF3A-208ENST00000484246 YPEL1O60688 119 aa12.77□□□□□ -0.37
UPF3A-208ENST00000484246 DIRAS3O95661 229 aa12.77□□□□□ -0.37
UPF3A-208ENST00000484246 MNDAP41218 407 aa12.77□□□□□ -0.37
UPF3A-208ENST00000484246 SRSF7Q16629 238 aaKnown RBP eCLIP12.77□□□□□ -0.37
UPF3A-208ENST00000484246 MORN2Q502X0 79 aa12.77□□□□□ -0.37
UPF3A-208ENST00000484246 OLFML2AQ68BL7 652 aa12.77□□□□□ -0.37
UPF3A-208ENST00000484246 C16orf82Q7Z2V1 217 aa12.77□□□□□ -0.37
UPF3A-208ENST00000484246 TOMM40LQ969M1 308 aa12.77□□□□□ -0.37
UPF3A-208ENST00000484246 YPEL2Q96QA6 119 aa12.77□□□□□ -0.37
UPF3A-208ENST00000484246 OR2S2Q9NQN1 319 aa12.77□□□□□ -0.37
UPF3A-208ENST00000484246 SPATA2Q9UM82 520 aa12.77□□□□□ -0.37
UPF3A-208ENST00000484246 ANK2Q01484 3957 aa12.77□□□□□ -0.37
UPF3A-208ENST00000484246 IGHV3-43A0A0B4J1X8 118 aa12.76□□□□□ -0.37
UPF3A-208ENST00000484246 FAM90A9PA6NNJ1 464 aa12.76□□□□□ -0.37
UPF3A-208ENST00000484246 ITGB1BP1O14713 200 aa12.76□□□□□ -0.37
UPF3A-208ENST00000484246 RGS11O94810 467 aa12.76□□□□□ -0.37
UPF3A-208ENST00000484246 IGHV3-7P01780 117 aa12.76□□□□□ -0.37
UPF3A-208ENST00000484246 GSTP1P09211 210 aaKnown RBP12.76□□□□□ -0.37
UPF3A-208ENST00000484246 CD3GP09693 182 aa12.76□□□□□ -0.37
UPF3A-208ENST00000484246 IGHV3-43DP0DP04 118 aa12.76□□□□□ -0.37
UPF3A-208ENST00000484246 GNB3P16520 340 aa12.76□□□□□ -0.37
UPF3A-208ENST00000484246 IL3RAP26951 378 aa12.76□□□□□ -0.37
UPF3A-208ENST00000484246 TGFBR1P36897 503 aa12.76□□□□□ -0.37
UPF3A-208ENST00000484246 RPS19P39019 145 aaKnown RBP12.76□□□□□ -0.37
UPF3A-208ENST00000484246 NCS1P62166 190 aa12.76□□□□□ -0.37
UPF3A-208ENST00000484246 GNMTQ14749 295 aa12.76□□□□□ -0.37
UPF3A-208ENST00000484246 LY6EQ16553 131 aa12.76□□□□□ -0.37
UPF3A-208ENST00000484246 PLA1AQ53H76 456 aa12.76□□□□□ -0.37
UPF3A-208ENST00000484246 CT45A1Q5HYN5 189 aa12.76□□□□□ -0.37
UPF3A-208ENST00000484246 IDNKQ5T6J7 187 aa12.76□□□□□ -0.37
UPF3A-208ENST00000484246 CCBE1Q6UXH8 406 aaPredicted RBP12.76□□□□□ -0.37
UPF3A-208ENST00000484246 Q6ZS49 121 aa12.76□□□□□ -0.37
UPF3A-208ENST00000484246 Q6ZSV7 163 aa12.76□□□□□ -0.37
UPF3A-208ENST00000484246 THNSL2Q86YJ6 484 aa12.76□□□□□ -0.37
UPF3A-208ENST00000484246 PRR18Q8N4B5 295 aa12.76□□□□□ -0.37
UPF3A-208ENST00000484246 DTX3Q8N9I9 347 aa12.76□□□□□ -0.37
UPF3A-208ENST00000484246 CT45A3Q8NHU0 189 aa12.76□□□□□ -0.37
UPF3A-208ENST00000484246 CFHR4Q92496 578 aa12.76□□□□□ -0.37
UPF3A-208ENST00000484246 SLC25A46Q96AG3 418 aa12.76□□□□□ -0.37
UPF3A-208ENST00000484246 ATG5Q9H1Y0 275 aa12.76□□□□□ -0.37
UPF3A-208ENST00000484246 BEX1Q9HBH7 125 aa12.76□□□□□ -0.37
UPF3A-208ENST00000484246 CLPSL1A2RUU4 121 aa12.75□□□□□ -0.37
UPF3A-208ENST00000484246 HSD17B6O14756 317 aa12.75□□□□□ -0.37
UPF3A-208ENST00000484246 SLC31A2O15432 143 aa12.75□□□□□ -0.37
UPF3A-208ENST00000484246 TXNL1O43396 289 aa12.75□□□□□ -0.37
UPF3A-208ENST00000484246 FCGR3AP08637 254 aa12.75□□□□□ -0.37
UPF3A-208ENST00000484246 MDKP21741 143 aaPredicted RBP12.75□□□□□ -0.37
UPF3A-208ENST00000484246 DTYMKP23919 212 aa12.75□□□□□ -0.37
UPF3A-208ENST00000484246 LSM3P62310 102 aaKnown RBP12.75□□□□□ -0.37
UPF3A-208ENST00000484246 CTF1Q16619 201 aa12.75□□□□□ -0.37
UPF3A-208ENST00000484246 FAM53AQ6NSI3 398 aaPredicted RBP12.75□□□□□ -0.37
UPF3A-208ENST00000484246 Q8N2B8 174 aa12.75□□□□□ -0.37
UPF3A-208ENST00000484246 OR10V1Q8NGI7 309 aa12.75□□□□□ -0.37
UPF3A-208ENST00000484246 OR5H6Q8NGV6 325 aa12.75□□□□□ -0.37
UPF3A-208ENST00000484246 ABHD14AQ9BUJ0 271 aa12.75□□□□□ -0.37
UPF3A-208ENST00000484246 ZNF747Q9BV97 191 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms