RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 NFYBP25208 207 aa8.03□□□□□ -1.12
CPSF4-213ENST00000484112 SSTR5P35346 364 aa8.03□□□□□ -1.12
CPSF4-213ENST00000484112 MNDAP41218 407 aa8.03□□□□□ -1.12
CPSF4-213ENST00000484112 RAB7AP51149 207 aa8.03□□□□□ -1.12
CPSF4-213ENST00000484112 HTD2P86397 168 aa8.03□□□□□ -1.12
CPSF4-213ENST00000484112 HABP2Q14520 560 aaPredicted RBP8.03□□□□□ -1.12
CPSF4-213ENST00000484112 SSX2Q16385 188 aa8.03□□□□□ -1.12
CPSF4-213ENST00000484112 NKAPLQ5M9Q1 402 aa8.03□□□□□ -1.12
CPSF4-213ENST00000484112 HES5Q5TA89 166 aa8.03□□□□□ -1.12
CPSF4-213ENST00000484112 OR10K2Q6IF99 312 aa8.03□□□□□ -1.12
CPSF4-213ENST00000484112 C16orf82Q7Z2V1 217 aa8.03□□□□□ -1.12
CPSF4-213ENST00000484112 LHFPL4Q7Z7J7 247 aa8.03□□□□□ -1.12
CPSF4-213ENST00000484112 NDNFQ8TB73 568 aa8.03□□□□□ -1.12
CPSF4-213ENST00000484112 MRPL30Q8TCC3 161 aaKnown RBP8.03□□□□□ -1.12
CPSF4-213ENST00000484112 PHF21AQ96BD5 680 aa8.03□□□□□ -1.12
CPSF4-213ENST00000484112 SULT4A1Q9BR01 284 aa8.03□□□□□ -1.12
CPSF4-213ENST00000484112 OCSTAMPQ9BR26 566 aa8.03□□□□□ -1.12
CPSF4-213ENST00000484112 CHCHD6Q9BRQ6 235 aa8.03□□□□□ -1.12
CPSF4-213ENST00000484112 NICN1Q9BSH3 213 aa8.03□□□□□ -1.12
CPSF4-213ENST00000484112 NPFFR1Q9GZQ6 430 aa8.03□□□□□ -1.12
CPSF4-213ENST00000484112 OR51E2Q9H255 320 aa8.03□□□□□ -1.12
CPSF4-213ENST00000484112 RANBP3Q9H6Z4 567 aaPredicted RBP8.03□□□□□ -1.12
CPSF4-213ENST00000484112 ZNF286AQ9HBT8 521 aa8.03□□□□□ -1.12
CPSF4-213ENST00000484112 GFOD1Q9NXC2 390 aa8.03□□□□□ -1.12
CPSF4-213ENST00000484112 JPT1Q9UK76 154 aa8.03□□□□□ -1.12
CPSF4-213ENST00000484112 TCF19Q9Y242 345 aa8.03□□□□□ -1.12
CPSF4-213ENST00000484112 UBE2QL1A1L167 161 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 SERPINE3A8MV23 424 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 C12orf77C9JDV5 145 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 LY6LH3BQJ8 138 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 SDCBPO00560 298 aaPredicted RBP8.02□□□□□ -1.13
CPSF4-213ENST00000484112 TXNL1O43396 289 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 AIREO43918 545 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 RGS11O94810 467 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 LPLP06858 475 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 IL3RAP26951 378 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 GDNFP39905 211 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 CLDN12P56749 244 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 OR10A3P58181 314 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 MADCAM1Q13477 382 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 DEFB121Q5J5C9 76 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 FOXB2Q5VYV0 432 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 SFXN4Q6P4A7 337 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 ZNF880Q6PDB4 577 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 C6orf201Q7Z4U5 140 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 THNSL2Q86YJ6 484 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 OR8H3Q8N146 312 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 OR4F17Q8NGA8 305 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 OR4K15Q8NH41 348 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 PIFOQ8TCI5 191 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 CCDC107Q8WV48 283 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 GALMQ96C23 342 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 YIPF6Q96EC8 236 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 AKR1E2Q96JD6 320 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 OR4F4Q96R69 305 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 FAAP24Q9BTP7 215 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 GHITMQ9H3K2 345 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 TAF9BQ9HBM6 251 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 C12orf4Q9NQ89 552 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 NDUFA13Q9P0J0 144 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 ABRACLQ9P1F3 81 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 PSG11Q9UQ72 335 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 ETV7Q9Y603 341 aa8.02□□□□□ -1.13
CPSF4-213ENST00000484112 A0A0A6YYD4 124 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 A0A0A6YYH2 397 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 LOC100506127A0A0U1RQW1 187 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 A6NJ64 397 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 SOCS1O15524 211 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 CHST1O43916 411 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 YPEL1O60688 119 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 PEX14O75381 377 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 DIRAS3O95661 229 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 HBZP02008 142 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 TFAP2AP05549 437 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 IGLL1P15814 213 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 SDC2P34741 201 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 RPL5P46777 297 aaKnown RBP8.01□□□□□ -1.13
CPSF4-213ENST00000484112 VEGFCP49767 419 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 ZNF137PP52743 207 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 TMEM50BP56557 158 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 MRPS15P82914 257 aaKnown RBP8.01□□□□□ -1.13
CPSF4-213ENST00000484112 HMGN3Q15651 99 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 SRSF7Q16629 238 aaKnown RBP eCLIP8.01□□□□□ -1.13
CPSF4-213ENST00000484112 PLA1AQ53H76 456 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 LDLRAD2Q5SZI1 272 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 TPTE2P1Q5T6R2 138 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 C11orf87Q6NUJ2 197 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 NR2C2APQ86WQ0 139 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 OR10R2Q8NGX6 335 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 OR10X1Q8NGY0 326 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 RFESDQ8TAC1 157 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 RPEQ96AT9 228 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 RAB3CQ96E17 227 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 YPEL2Q96QA6 119 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 CITED2Q99967 270 aaPredicted RBP8.01□□□□□ -1.13
CPSF4-213ENST00000484112 GNG12Q9UBI6 72 aa8.01□□□□□ -1.13
CPSF4-213ENST00000484112 KIAA2026Q5HYC2 2103 aa8□□□□□ -1.13
CPSF4-213ENST00000484112 SMIM31A0A1B0GVY4 71 aa8□□□□□ -1.13
CPSF4-213ENST00000484112 A0A1W2PRX2 142 aa8□□□□□ -1.13
CPSF4-213ENST00000484112 A6NDX4 124 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms