RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 OR5W2Q8NH69 310 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 JOSD2Q8TAC2 188 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 ZFP90Q8TF47 636 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 HIST1H2BAQ96A08 127 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 NABP1Q96AH0 204 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 C9orf85Q96MD7 179 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 OR2A7Q96R45 310 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 TP53RKQ96S44 253 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 ZNF649Q9BS31 505 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 C20orf85Q9H1P6 137 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 CACYBPQ9HB71 228 aaKnown RBP3.19□□□□□ -1.9
VPS41-212ENST00000482217 EXOSC3Q9NQT5 275 aaKnown RBP3.19□□□□□ -1.9
VPS41-212ENST00000482217 ZNF226Q9NYT6 803 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 PCYOX1Q9UHG3 505 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 SSR3Q9UNL2 185 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 VSIG4Q9Y279 399 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 LAMTOR2Q9Y2Q5 125 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 INSIG2Q9Y5U4 225 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 ROBO3Q96MS0 1386 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 EIF4G3O43432 1585 aaKnown RBP3.19□□□□□ -1.9
VPS41-212ENST00000482217 MIA3Q5JRA6 1907 aa3.19□□□□□ -1.9
VPS41-212ENST00000482217 ABCC10Q5T3U5 1492 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 ABCC12Q96J65 1359 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 TRAV8-6A0A0B4J262 113 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 IGHV4-61A0A0C4DH41 118 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 SIGLEC16A6NMB1 481 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 SMIM1B2RUZ4 78 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 NDUFS5O43920 106 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 GGCTO75223 188 aaKnown RBP3.18□□□□□ -1.9
VPS41-212ENST00000482217 UPK1BO75841 260 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 MMP23AO75900 390 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 ZFAND5O76080 213 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 GADD45GO95257 159 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 DUS4LO95620 317 aaKnown RBP3.18□□□□□ -1.9
VPS41-212ENST00000482217 IGHV4-59P01825 116 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 NPY1RP25929 384 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 MDH2P40926 338 aaKnown RBP3.18□□□□□ -1.9
VPS41-212ENST00000482217 POLR2HP52434 150 aaKnown RBP3.18□□□□□ -1.9
VPS41-212ENST00000482217 CRYBA2P53672 197 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 PKIAP61925 76 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 RPS23P62266 143 aaKnown RBP3.18□□□□□ -1.9
VPS41-212ENST00000482217 RPS28P62857 69 aaKnown RBP3.18□□□□□ -1.9
VPS41-212ENST00000482217 PRR3P79522 188 aaKnown RBP3.18□□□□□ -1.9
VPS41-212ENST00000482217 TNFAIP6P98066 277 aaPredicted RBP3.18□□□□□ -1.9
VPS41-212ENST00000482217 IFITM3Q01628 133 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 ZNF763Q0D2J5 394 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 INCA1Q0VD86 236 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 DAZ2Q13117 558 aaKnown RBP3.18□□□□□ -1.9
VPS41-212ENST00000482217 PAFAH1B3Q15102 231 aaKnown RBP3.18□□□□□ -1.9
VPS41-212ENST00000482217 TMEM236Q5W0B7 351 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 TMEM179BQ7Z7N9 219 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 DAZ4Q86SG3 579 aaKnown RBP3.18□□□□□ -1.9
VPS41-212ENST00000482217 LINC01551Q86U37 167 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 NR2C2APQ86WQ0 139 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 BAP18Q8IXM2 172 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 LINC00337Q8N6G1 96 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 ZNF675Q8TD23 568 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 SLC25A44Q96H78 314 aaPredicted RBP3.18□□□□□ -1.9
VPS41-212ENST00000482217 C18orf12Q96KH6 178 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 BTN2A3PQ96KV6 586 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 OR2M2Q96R28 347 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 LYSMD1Q96S90 227 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 PRSS27Q9BQR3 290 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 PBDC1Q9BVG4 233 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 SRXN1Q9BYN0 137 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 KRTAP2-2Q9BYT5 123 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 CST9LQ9H4G1 147 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 LHX9Q9NQ69 397 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 ZNF331Q9NQX6 463 aaPredicted RBP3.18□□□□□ -1.9
VPS41-212ENST00000482217 DAZ1Q9NQZ3 744 aaKnown RBP3.18□□□□□ -1.9
VPS41-212ENST00000482217 DAZ3Q9NR90 486 aaKnown RBP3.18□□□□□ -1.9
VPS41-212ENST00000482217 MED11Q9P086 117 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 SLC23A2Q9UGH3 650 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 RSL24D1Q9UHA3 163 aaKnown RBP3.18□□□□□ -1.9
VPS41-212ENST00000482217 KCNE3Q9Y6H6 103 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 V9GY05 133 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 NOS1P29475 1434 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 PDS5BQ9NTI5 1447 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 CDK5RAP2Q96SN8 1893 aa3.18□□□□□ -1.9
VPS41-212ENST00000482217 REREQ9P2R6 1566 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 BORCS7-ASMTA0A0B4J1R7 106 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 A0A0G2JN53 185 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 LOC100130705A0A1B0GUX0 176 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 FAM183AA6NL82 134 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 IFITM10A6NMD0 228 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 SHISA9B4DS77 424 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 H3BSA7 217 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 H7C1C5 153 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 MRASO14807 208 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 FFAR1O14842 300 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 CCL25O15444 150 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 MMP7P09237 267 aaPredicted RBP3.17□□□□□ -1.9
VPS41-212ENST00000482217 LGALS1P09382 135 aaKnown RBP3.17□□□□□ -1.9
VPS41-212ENST00000482217 OR4Q2P0C623 313 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 CTLA4P16410 223 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 TAS2R30P59541 319 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 LCN6P62502 163 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 RPS24P62847 133 aaKnown RBP3.17□□□□□ -1.9
VPS41-212ENST00000482217 REG3AQ06141 175 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 IL15RAQ13261 267 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms