RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 SPARTQ8N0X7 666 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 OR8H3Q8N146 312 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 ABHD12Q8N2K0 398 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-213ENST00000480102 OR4S1Q8NGB4 309 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 OR4D6Q8NGJ1 314 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 OR4P4Q8NGL7 312 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 OR9G1Q8NH87 305 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 PIFOQ8TCI5 191 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 H1FXQ92522 213 aaKnown RBP3.95□□□□□ -1.78
PTCD3-213ENST00000480102 LHX4Q969G2 390 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 OR5M11Q96RB7 305 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 CHCHD6Q9BRQ6 235 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 DPCDQ9BVM2 203 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-213ENST00000480102 C1orf43Q9BWL3 253 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 FAM192AQ9GZU8 254 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.95□□□□□ -1.78
PTCD3-213ENST00000480102 C1RLQ9NZP8 487 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 C11orf21Q9P2W6 132 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 OR14J1Q9UGF5 321 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 GSTK1Q9Y2Q3 226 aa3.95□□□□□ -1.78
PTCD3-213ENST00000480102 MRPS28Q9Y2Q9 187 aaKnown RBP3.95□□□□□ -1.78
PTCD3-213ENST00000480102 CLPSL1A2RUU4 121 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 PRSS29PA6NIE9 313 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 FOXI3A8MTJ6 420 aaPredicted RBP3.94□□□□□ -1.78
PTCD3-213ENST00000480102 SERPINE3A8MV23 424 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 MCRIP1C9JLW8 97 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 C15orf65H3BRN8 121 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 BUB1B-PAK6H3BSN5 160 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 AIPO00170 330 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 PDCD5O14737 125 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 GEMIN2O14893 280 aaKnown RBP3.94□□□□□ -1.78
PTCD3-213ENST00000480102 GPR137BO60478 399 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 TPPPO94811 219 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 CRYBA1P05813 215 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 MGMTP16455 207 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 CCL3L1P16619 93 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 CDK2P24941 298 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 CHATP28329 748 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 SLC6A1P30531 599 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 BRS3P32247 399 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 OR3A4PP47883 348 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 GLIPR1P48060 266 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 RAB7AP51149 207 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 EDDM3BP56851 147 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 LOXL3P58215 753 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 PROK1P58294 105 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 RAP2BP61225 183 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 ACTG1P63261 375 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 HNRNPA0Q13151 305 aaKnown RBP3.94□□□□□ -1.78
PTCD3-213ENST00000480102 MADCAM1Q13477 382 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 TAF9Q16594 264 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 PAN3Q58A45 887 aaKnown RBP3.94□□□□□ -1.78
PTCD3-213ENST00000480102 LIPKQ5VXJ0 399 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 AWAT2Q6E213 333 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 RAB12Q6IQ22 244 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 C16orf54Q6UWD8 224 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 GLIPR1L1Q6UWM5 242 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 BRD3OSQ6XYD6 125 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 CEACAM19Q7Z692 300 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 IZUMO1Q8IYV9 350 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 RNF152Q8N8N0 203 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 SUMF2Q8NBJ7 301 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 LINC01006Q8NI28 216 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 WIPF2Q8TF74 440 aaPredicted RBP3.94□□□□□ -1.78
PTCD3-213ENST00000480102 MUL1Q969V5 352 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 CITED1Q99966 193 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 URM1Q9BTM9 101 aaKnown RBP3.94□□□□□ -1.78
PTCD3-213ENST00000480102 CHIAQ9BZP6 476 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 NPFFR1Q9GZQ6 430 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 MMP28Q9H239 520 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 SIRT7Q9NRC8 400 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 CALYQ9NYX4 217 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 IDI2-AS1Q9NZ38 188 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 IL36RNQ9UBH0 155 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 JPT1Q9UK76 154 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 GAB2Q9UQC2 676 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 TCF19Q9Y242 345 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 RRP15Q9Y3B9 282 aaKnown RBP3.94□□□□□ -1.78
PTCD3-213ENST00000480102 V9GY05 133 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 MGAM2Q2M2H8 2515 aa3.94□□□□□ -1.78
PTCD3-213ENST00000480102 MEIKINA0A087WXM9 373 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 MAGEA13PA6NCF6 341 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 A6NDX4 124 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 IFITM5A6NNB3 132 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 J3QR06 171 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 SIRPB1O00241 398 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 SPINT2O43291 252 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 FGF16O43320 207 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 RRP9O43818 475 aaKnown RBP3.93□□□□□ -1.78
PTCD3-213ENST00000480102 YPEL1O60688 119 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 RGS11O94810 467 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 CDRT1O95170 752 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 TNFAIP8O95379 198 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 IGHV4-59P01825 116 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 MAS1P04201 325 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 FAM106CPP0CH98 169 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 CALCBP10092 127 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 ARSBP15848 533 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 IL3RAP26951 378 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms