RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 VSIG4Q9Y279 399 aa10.36□□□□□ -0.75
ABCF1-206ENST00000479542 IGHV3-72A0A0B4J1Y9 119 aa10.35□□□□□ -0.75
ABCF1-206ENST00000479542 A0A1W2PPE3 182 aa10.35□□□□□ -0.75
ABCF1-206ENST00000479542 FAM90A7PA6NKC0 464 aa10.35□□□□□ -0.75
ABCF1-206ENST00000479542 FAM90A23PA8MXZ1 464 aa10.35□□□□□ -0.75
ABCF1-206ENST00000479542 GEMIN2O14893 280 aaKnown RBP10.35□□□□□ -0.75
ABCF1-206ENST00000479542 SPINT2O43291 252 aa10.35□□□□□ -0.75
ABCF1-206ENST00000479542 GTF2F2P13984 249 aa10.35□□□□□ -0.75
ABCF1-206ENST00000479542 REG1BP48304 166 aa10.35□□□□□ -0.75
ABCF1-206ENST00000479542 F2RL1P55085 397 aa10.35□□□□□ -0.75
ABCF1-206ENST00000479542 GABPB1Q06547 395 aaPredicted RBP10.35□□□□□ -0.75
ABCF1-206ENST00000479542 ZNF616Q08AN1 781 aa10.35□□□□□ -0.75
ABCF1-206ENST00000479542 FAM27D1Q5T7N8 215 aa10.35□□□□□ -0.75
ABCF1-206ENST00000479542 DMKNQ6E0U4 476 aaPredicted RBP10.35□□□□□ -0.75
ABCF1-206ENST00000479542 TMEM65Q6PI78 240 aa10.35□□□□□ -0.75
ABCF1-206ENST00000479542 SATL1Q86VE3 508 aa10.35□□□□□ -0.75
ABCF1-206ENST00000479542 CDH26Q8IXH8 852 aa10.35□□□□□ -0.75
ABCF1-206ENST00000479542 STX19Q8N4C7 294 aa10.35□□□□□ -0.75
ABCF1-206ENST00000479542 ZFP41Q8N8Y5 198 aa10.35□□□□□ -0.75
ABCF1-206ENST00000479542 BPIFB6Q8NFQ5 453 aa10.35□□□□□ -0.75
ABCF1-206ENST00000479542 OR13C5Q8NGS8 318 aa10.35□□□□□ -0.75
ABCF1-206ENST00000479542 NRG4Q8WWG1 115 aa10.35□□□□□ -0.75
ABCF1-206ENST00000479542 GHSRQ92847 366 aa10.35□□□□□ -0.75
ABCF1-206ENST00000479542 TMEM106AQ96A25 262 aa10.35□□□□□ -0.75
ABCF1-206ENST00000479542 HSPB9Q9BQS6 159 aa10.35□□□□□ -0.75
ABCF1-206ENST00000479542 VCXQ9H320 206 aa10.35□□□□□ -0.75
ABCF1-206ENST00000479542 HUWE1Q7Z6Z7 4374 aaKnown RBP10.34□□□□□ -0.75
ABCF1-206ENST00000479542 TRBV5-5A0A0J9YX44 114 aa10.34□□□□□ -0.75
ABCF1-206ENST00000479542 ARPC1BO15143 372 aaKnown RBP10.34□□□□□ -0.75
ABCF1-206ENST00000479542 CDRT1O95170 752 aa10.34□□□□□ -0.75
ABCF1-206ENST00000479542 HLA-DRB1P01911 266 aa10.34□□□□□ -0.75
ABCF1-206ENST00000479542 ZNF93P35789 620 aaPredicted RBP10.34□□□□□ -0.75
ABCF1-206ENST00000479542 ZNF134P52741 427 aa10.34□□□□□ -0.75
ABCF1-206ENST00000479542 RPS11P62280 158 aaKnown RBP eCLIP10.34□□□□□ -0.75
ABCF1-206ENST00000479542 CT45A1Q5HYN5 189 aa10.34□□□□□ -0.75
ABCF1-206ENST00000479542 C6orf183Q5T699 404 aa10.34□□□□□ -0.75
ABCF1-206ENST00000479542 AHSA2Q719I0 299 aa10.34□□□□□ -0.75
ABCF1-206ENST00000479542 MINDY2Q8NBR6 621 aa10.34□□□□□ -0.75
ABCF1-206ENST00000479542 OR1N2Q8NGR9 330 aa10.34□□□□□ -0.75
ABCF1-206ENST00000479542 OR10K1Q8NGX5 313 aa10.34□□□□□ -0.75
ABCF1-206ENST00000479542 CT45A3Q8NHU0 189 aa10.34□□□□□ -0.75
ABCF1-206ENST00000479542 ORAI1Q96D31 301 aa10.34□□□□□ -0.75
ABCF1-206ENST00000479542 S100A13Q99584 98 aa10.34□□□□□ -0.75
ABCF1-206ENST00000479542 OR51J1Q9H342 316 aa10.34□□□□□ -0.75
ABCF1-206ENST00000479542 FKBP14Q9NWM8 211 aa10.34□□□□□ -0.75
ABCF1-206ENST00000479542 ZNF107Q9UII5 783 aaPredicted RBP10.34□□□□□ -0.75
ABCF1-206ENST00000479542 TRAV39A0A0B4J263 110 aa10.33□□□□□ -0.76
ABCF1-206ENST00000479542 ZNF736B4DX44 427 aaPredicted RBP10.33□□□□□ -0.76
ABCF1-206ENST00000479542 AIPO00170 330 aa10.33□□□□□ -0.76
ABCF1-206ENST00000479542 SC5DO75845 299 aa10.33□□□□□ -0.76
ABCF1-206ENST00000479542 BDKRB2P30411 391 aa10.33□□□□□ -0.76
ABCF1-206ENST00000479542 RAB9AP51151 201 aa10.33□□□□□ -0.76
ABCF1-206ENST00000479542 CRIP2P52943 208 aaPredicted RBP10.33□□□□□ -0.76
ABCF1-206ENST00000479542 PPP3R1P63098 170 aa10.33□□□□□ -0.76
ABCF1-206ENST00000479542 LSAMPQ13449 338 aa10.33□□□□□ -0.76
ABCF1-206ENST00000479542 DOC2BQ14184 412 aa10.33□□□□□ -0.76
ABCF1-206ENST00000479542 ASPHD1Q5U4P2 390 aa10.33□□□□□ -0.76
ABCF1-206ENST00000479542 NPBQ8NG41 125 aa10.33□□□□□ -0.76
ABCF1-206ENST00000479542 PGLYRP3Q96LB9 341 aa10.33□□□□□ -0.76
ABCF1-206ENST00000479542 ASCL2Q99929 193 aa10.33□□□□□ -0.76
ABCF1-206ENST00000479542 ZNF581Q9P0T4 197 aa10.33□□□□□ -0.76
ABCF1-206ENST00000479542 ING4Q9UNL4 249 aa10.33□□□□□ -0.76
ABCF1-206ENST00000479542 LRRC42Q9Y546 428 aa10.33□□□□□ -0.76
ABCF1-206ENST00000479542 C12orf77C9JDV5 145 aa10.32□□□□□ -0.76
ABCF1-206ENST00000479542 MCRIP1C9JLW8 97 aa10.32□□□□□ -0.76
ABCF1-206ENST00000479542 OVOL1O14753 267 aa10.32□□□□□ -0.76
ABCF1-206ENST00000479542 IGFBP3P17936 291 aaPredicted RBP10.32□□□□□ -0.76
ABCF1-206ENST00000479542 AQP4P55087 323 aa10.32□□□□□ -0.76
ABCF1-206ENST00000479542 HTD2P86397 168 aa10.32□□□□□ -0.76
ABCF1-206ENST00000479542 Q499Y3 187 aa10.32□□□□□ -0.76
ABCF1-206ENST00000479542 MORN2Q502X0 79 aa10.32□□□□□ -0.76
ABCF1-206ENST00000479542 YIF1BQ5BJH7 314 aa10.32□□□□□ -0.76
ABCF1-206ENST00000479542 SYT6Q5T7P8 510 aaPredicted RBP10.32□□□□□ -0.76
ABCF1-206ENST00000479542 DDI2Q5TDH0 399 aa10.32□□□□□ -0.76
ABCF1-206ENST00000479542 SBSPONQ8IVN8 264 aa10.32□□□□□ -0.76
ABCF1-206ENST00000479542 TCTEX1D1Q8N7M0 179 aa10.32□□□□□ -0.76
ABCF1-206ENST00000479542 NANOGP1Q8N7R0 232 aa10.32□□□□□ -0.76
ABCF1-206ENST00000479542 RCHY1Q96PM5 261 aa10.32□□□□□ -0.76
ABCF1-206ENST00000479542 FAM192AQ9GZU8 254 aa10.32□□□□□ -0.76
ABCF1-206ENST00000479542 KLK15Q9H2R5 256 aa10.32□□□□□ -0.76
ABCF1-206ENST00000479542 MBNL3Q9NUK0 354 aaKnown RBP10.32□□□□□ -0.76
ABCF1-206ENST00000479542 GNG12Q9UBI6 72 aa10.32□□□□□ -0.76
ABCF1-206ENST00000479542 ERGIC3Q9Y282 383 aa10.32□□□□□ -0.76
ABCF1-206ENST00000479542 MRPS28Q9Y2Q9 187 aaKnown RBP10.32□□□□□ -0.76
ABCF1-206ENST00000479542 DYNC2H1Q8NCM8 4307 aaKnown RBP10.31□□□□□ -0.76
ABCF1-206ENST00000479542 TRBV5-7A0A0A0MS05 114 aa10.31□□□□□ -0.76
ABCF1-206ENST00000479542 PNMA8CA0A1B0GUJ8 204 aa10.31□□□□□ -0.76
ABCF1-206ENST00000479542 ERICH4A6NGS2 130 aa10.31□□□□□ -0.76
ABCF1-206ENST00000479542 A8MZ25 164 aa10.31□□□□□ -0.76
ABCF1-206ENST00000479542 MYL12BO14950 172 aa10.31□□□□□ -0.76
ABCF1-206ENST00000479542 SLC31A2O15432 143 aa10.31□□□□□ -0.76
ABCF1-206ENST00000479542 NDUFA3O95167 84 aa10.31□□□□□ -0.76
ABCF1-206ENST00000479542 HBZP02008 142 aa10.31□□□□□ -0.76
ABCF1-206ENST00000479542 WNT4P56705 351 aa10.31□□□□□ -0.76
ABCF1-206ENST00000479542 TAS2R43P59537 309 aa10.31□□□□□ -0.76
ABCF1-206ENST00000479542 MMDQ15546 238 aa10.31□□□□□ -0.76
ABCF1-206ENST00000479542 C19orf54Q5BKX5 351 aa10.31□□□□□ -0.76
ABCF1-206ENST00000479542 C6orf141Q5SZD1 244 aa10.31□□□□□ -0.76
ABCF1-206ENST00000479542 ATAD3CQ5T2N8 411 aa10.31□□□□□ -0.76
ABCF1-206ENST00000479542 DCUN1D4Q92564 292 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms