RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 NKX1-2Q9UD57 310 aaPredicted RBP13.67□□□□□ -0.22
ECHDC1-216ENST00000479525 GPR50Q13585 617 aa13.66□□□□□ -0.22
ECHDC1-216ENST00000479525 ACSM3Q53FZ2 586 aa13.66□□□□□ -0.22
ECHDC1-216ENST00000479525 C6orf183Q5T699 404 aa13.66□□□□□ -0.22
ECHDC1-216ENST00000479525 FOXRED2Q8IWF2 684 aa13.66□□□□□ -0.22
ECHDC1-216ENST00000479525 FBLIM1Q8WUP2 373 aa13.66□□□□□ -0.22
ECHDC1-216ENST00000479525 RAX2Q96IS3 184 aa13.66□□□□□ -0.22
ECHDC1-216ENST00000479525 ABCG5Q9H222 651 aa13.66□□□□□ -0.22
ECHDC1-216ENST00000479525 OR2S2Q9NQN1 319 aa13.66□□□□□ -0.22
ECHDC1-216ENST00000479525 FKBP14Q9NWM8 211 aa13.66□□□□□ -0.22
ECHDC1-216ENST00000479525 MOSP00540 346 aa13.65□□□□□ -0.22
ECHDC1-216ENST00000479525 FUT3P21217 361 aa13.65□□□□□ -0.22
ECHDC1-216ENST00000479525 CD1BP29016 333 aa13.65□□□□□ -0.22
ECHDC1-216ENST00000479525 OR3A3P47888 321 aa13.65□□□□□ -0.22
ECHDC1-216ENST00000479525 SLC35B1P78383 322 aa13.65□□□□□ -0.22
ECHDC1-216ENST00000479525 MORN2Q502X0 79 aa13.65□□□□□ -0.22
ECHDC1-216ENST00000479525 C6orf201Q7Z4U5 140 aa13.65□□□□□ -0.22
ECHDC1-216ENST00000479525 LRRTM1Q86UE6 522 aa13.65□□□□□ -0.22
ECHDC1-216ENST00000479525 OR51D1Q8NGF3 324 aa13.65□□□□□ -0.22
ECHDC1-216ENST00000479525 RASL11BQ9BPW5 248 aa13.65□□□□□ -0.22
ECHDC1-216ENST00000479525 FAAP24Q9BTP7 215 aa13.65□□□□□ -0.22
ECHDC1-216ENST00000479525 MRPL20Q9BYC9 149 aaKnown RBP13.65□□□□□ -0.22
ECHDC1-216ENST00000479525 SPACA1Q9HBV2 294 aa13.65□□□□□ -0.22
ECHDC1-216ENST00000479525 PLCXD1Q9NUJ7 323 aa13.65□□□□□ -0.22
ECHDC1-216ENST00000479525 CASQ2O14958 399 aaPredicted RBP13.64□□□□□ -0.23
ECHDC1-216ENST00000479525 PDCD6O75340 191 aa13.64□□□□□ -0.23
ECHDC1-216ENST00000479525 CDK1P06493 297 aa13.64□□□□□ -0.23
ECHDC1-216ENST00000479525 VSIG8P0DPA2 414 aa13.64□□□□□ -0.23
ECHDC1-216ENST00000479525 LSAMPQ13449 338 aa13.64□□□□□ -0.23
ECHDC1-216ENST00000479525 ZNF695Q8IW36 515 aa13.64□□□□□ -0.23
ECHDC1-216ENST00000479525 ODF3L1Q8IXM7 274 aa13.64□□□□□ -0.23
ECHDC1-216ENST00000479525 SETD6Q8TBK2 473 aa13.64□□□□□ -0.23
ECHDC1-216ENST00000479525 TMEM203Q969S6 136 aa13.64□□□□□ -0.23
ECHDC1-216ENST00000479525 LIN7CQ9NUP9 197 aaKnown RBP13.64□□□□□ -0.23
ECHDC1-216ENST00000479525 ERGIC3Q9Y282 383 aa13.64□□□□□ -0.23
ECHDC1-216ENST00000479525 A0A0A6YYD4 124 aa13.63□□□□□ -0.23
ECHDC1-216ENST00000479525 AP4M1O00189 453 aa13.63□□□□□ -0.23
ECHDC1-216ENST00000479525 SC5DO75845 299 aa13.63□□□□□ -0.23
ECHDC1-216ENST00000479525 SNRPBP14678 240 aaKnown RBP13.63□□□□□ -0.23
ECHDC1-216ENST00000479525 LUMP51884 338 aaPredicted RBP13.63□□□□□ -0.23
ECHDC1-216ENST00000479525 AQP4P55087 323 aa13.63□□□□□ -0.23
ECHDC1-216ENST00000479525 MED22Q15528 200 aa13.63□□□□□ -0.23
ECHDC1-216ENST00000479525 GAPTQ8N292 157 aa13.63□□□□□ -0.23
ECHDC1-216ENST00000479525 NKAIN3Q8N8D7 197 aa13.63□□□□□ -0.23
ECHDC1-216ENST00000479525 MRPS24Q96EL2 167 aaKnown RBP13.63□□□□□ -0.23
ECHDC1-216ENST00000479525 P2RX4Q99571 388 aa13.63□□□□□ -0.23
ECHDC1-216ENST00000479525 HDHD3Q9BSH5 251 aaPredicted RBP13.63□□□□□ -0.23
ECHDC1-216ENST00000479525 ABHD14AQ9BUJ0 271 aa13.63□□□□□ -0.23
ECHDC1-216ENST00000479525 PARP12Q9H0J9 701 aaKnown RBP13.63□□□□□ -0.23
ECHDC1-216ENST00000479525 DCLRE1BQ9H816 532 aa13.63□□□□□ -0.23
ECHDC1-216ENST00000479525 C8orf4Q9NR00 106 aa13.63□□□□□ -0.23
ECHDC1-216ENST00000479525 WSB1Q9Y6I7 421 aa13.63□□□□□ -0.23
ECHDC1-216ENST00000479525 ST8SIA5O15466 376 aa13.62□□□□□ -0.23
ECHDC1-216ENST00000479525 CHATP28329 748 aa13.62□□□□□ -0.23
ECHDC1-216ENST00000479525 HTR2CP28335 458 aa13.62□□□□□ -0.23
ECHDC1-216ENST00000479525 UNC119Q13432 240 aa13.62□□□□□ -0.23
ECHDC1-216ENST00000479525 P2RY14Q15391 338 aa13.62□□□□□ -0.23
ECHDC1-216ENST00000479525 MMDQ15546 238 aa13.62□□□□□ -0.23
ECHDC1-216ENST00000479525 UNQ9370/PRO34162Q6UXP9 181 aa13.62□□□□□ -0.23
ECHDC1-216ENST00000479525 CEACAM19Q7Z692 300 aa13.62□□□□□ -0.23
ECHDC1-216ENST00000479525 FAM71E2Q8N5Q1 922 aa13.62□□□□□ -0.23
ECHDC1-216ENST00000479525 C8orf31Q8N9H6 132 aa13.62□□□□□ -0.23
ECHDC1-216ENST00000479525 NRG4Q8WWG1 115 aa13.62□□□□□ -0.23
ECHDC1-216ENST00000479525 IL1F10Q8WWZ1 152 aa13.62□□□□□ -0.23
ECHDC1-216ENST00000479525 OR5B12Q96R08 314 aa13.62□□□□□ -0.23
ECHDC1-216ENST00000479525 MND1Q9BWT6 205 aa13.62□□□□□ -0.23
ECHDC1-216ENST00000479525 MBNL3Q9NUK0 354 aaKnown RBP13.62□□□□□ -0.23
ECHDC1-216ENST00000479525 KCNIP1Q9NZI2 227 aa13.62□□□□□ -0.23
ECHDC1-216ENST00000479525 LSM2Q9Y333 95 aaKnown RBP13.62□□□□□ -0.23
ECHDC1-216ENST00000479525 G3V318 75 aa13.61□□□□□ -0.23
ECHDC1-216ENST00000479525 CCL24O00175 119 aa13.61□□□□□ -0.23
ECHDC1-216ENST00000479525 MAPK3P27361 379 aaPredicted RBP13.61□□□□□ -0.23
ECHDC1-216ENST00000479525 MYCNOSP40205 109 aa13.61□□□□□ -0.23
ECHDC1-216ENST00000479525 ZNF137PP52743 207 aa13.61□□□□□ -0.23
ECHDC1-216ENST00000479525 PNLIPRP3Q17RR3 467 aa13.61□□□□□ -0.23
ECHDC1-216ENST00000479525 C6orf141Q5SZD1 244 aa13.61□□□□□ -0.23
ECHDC1-216ENST00000479525 LIPKQ5VXJ0 399 aa13.61□□□□□ -0.23
ECHDC1-216ENST00000479525 TEX38Q6PEX7 206 aa13.61□□□□□ -0.23
ECHDC1-216ENST00000479525 GLDNQ6ZMI3 551 aaPredicted RBP13.61□□□□□ -0.23
ECHDC1-216ENST00000479525 NEDD4LQ96PU5 975 aa13.61□□□□□ -0.23
ECHDC1-216ENST00000479525 GFI1Q99684 422 aa13.61□□□□□ -0.23
ECHDC1-216ENST00000479525 NABP2Q9BQ15 211 aa13.61□□□□□ -0.23
ECHDC1-216ENST00000479525 UQCC2Q9BRT2 126 aa13.61□□□□□ -0.23
ECHDC1-216ENST00000479525 TMEM59Q9BXS4 323 aa13.61□□□□□ -0.23
ECHDC1-216ENST00000479525 ZFP57Q9NU63 452 aa13.61□□□□□ -0.23
ECHDC1-216ENST00000479525 SAA2-SAA4A0A096LPE2 208 aa13.6□□□□□ -0.23
ECHDC1-216ENST00000479525 FAM90A10PA6NDY2 464 aa13.6□□□□□ -0.23
ECHDC1-216ENST00000479525 FAM90A7PA6NKC0 464 aa13.6□□□□□ -0.23
ECHDC1-216ENST00000479525 FAM90A23PA8MXZ1 464 aa13.6□□□□□ -0.23
ECHDC1-216ENST00000479525 H0YHG0 523 aa13.6□□□□□ -0.23
ECHDC1-216ENST00000479525 CD1AP06126 327 aa13.6□□□□□ -0.23
ECHDC1-216ENST00000479525 HSMCR30P0CW71 290 aa13.6□□□□□ -0.23
ECHDC1-216ENST00000479525 SAA2P0DJI9 122 aaPredicted RBP13.6□□□□□ -0.23
ECHDC1-216ENST00000479525 SOX6P35712 828 aa13.6□□□□□ -0.23
ECHDC1-216ENST00000479525 RPS25P62851 125 aaKnown RBP13.6□□□□□ -0.23
ECHDC1-216ENST00000479525 EGFEM1PQ0D2K5 195 aa13.6□□□□□ -0.23
ECHDC1-216ENST00000479525 RPL39P5Q59GN2 51 aa13.6□□□□□ -0.23
ECHDC1-216ENST00000479525 CXorf66Q5JRM2 361 aaPredicted RBP13.6□□□□□ -0.23
ECHDC1-216ENST00000479525 CDH26Q8IXH8 852 aa13.6□□□□□ -0.23
ECHDC1-216ENST00000479525 CASTOR1Q8WTX7 329 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms