RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 GEMIN2O14893 280 aaKnown RBP3.8□□□□□ -1.8
SSR1-207ENST00000479485 CCL25O15444 150 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 ZNF264O43296 627 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 FCMRO60667 390 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 DEDDO75618 318 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 ZFAND5O76080 213 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 TYMSP04818 313 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 SRP19P09132 144 aaKnown RBP3.8□□□□□ -1.8
SSR1-207ENST00000479485 OR4A8P0C604 315 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 PIRTP0C851 137 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 PGA3P0DJD8 388 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 AKR1C4P17516 323 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 CNN1P51911 297 aaKnown RBP3.8□□□□□ -1.8
SSR1-207ENST00000479485 CRYBB1P53674 252 aaPredicted RBP3.8□□□□□ -1.8
SSR1-207ENST00000479485 TMEM33P57088 247 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 PFN3P60673 137 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 LCN6P62502 163 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 RPL23AP62750 156 aaKnown RBP3.8□□□□□ -1.8
SSR1-207ENST00000479485 ZNF117Q03924 483 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 TGM3Q08188 693 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 MFGE8Q08431 387 aaPredicted RBP3.8□□□□□ -1.8
SSR1-207ENST00000479485 CRMP1Q14194 572 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 ENDOGQ14249 297 aaKnown RBP3.8□□□□□ -1.8
SSR1-207ENST00000479485 IHHQ14623 411 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 ACSF3Q4G176 576 aaPredicted RBP3.8□□□□□ -1.8
SSR1-207ENST00000479485 TP53I3Q53FA7 332 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 VAX1Q5SQQ9 334 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 C10orf120Q5SQS8 335 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 PIP5KL1Q5T9C9 394 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 WSCD1Q658N2 575 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 Q7L0L9 218 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 LHFPL4Q7Z7J7 247 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 RBM45Q8IUH3 476 aaKnown RBP3.8□□□□□ -1.8
SSR1-207ENST00000479485 ZNF683Q8IZ20 524 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 CLDN19Q8N6F1 224 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 AMER3Q8N944 861 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 APCDD1LQ8NCL9 501 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 OR5D18Q8NGL1 313 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 OR4S2Q8NH73 311 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 OR5K2Q8NHB8 316 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 ZNF563Q8TA94 476 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 OCC1Q8TAD7 63 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 FNDC9Q8TBE3 224 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 TMEM234Q8WY98 164 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 OR1E3Q8WZA6 343 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 EMG1Q92979 244 aaKnown RBP3.8□□□□□ -1.8
SSR1-207ENST00000479485 FAM46BQ96A09 425 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 MRPL24Q96A35 216 aaKnown RBP3.8□□□□□ -1.8
SSR1-207ENST00000479485 FGGYQ96C11 551 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 OR10C1Q96KK4 312 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 FOXN4Q96NZ1 517 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 TBX15Q96SF7 602 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 MCHR1Q99705 422 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 SLC6A7Q99884 636 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 OPRPNQ99935 248 aaPredicted RBP3.8□□□□□ -1.8
SSR1-207ENST00000479485 SCRT1Q9BWW7 348 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 NMNAT2Q9BZQ4 307 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 TMEM106BQ9NUM4 274 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 MRPL27Q9P0M9 148 aaKnown RBP3.8□□□□□ -1.8
SSR1-207ENST00000479485 TBX21Q9UL17 535 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 RAB22AQ9UL26 194 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 PSG11Q9UQ72 335 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 PPP1R3CQ9UQK1 317 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 C14orf166Q9Y224 244 aaKnown RBP3.8□□□□□ -1.8
SSR1-207ENST00000479485 MED31Q9Y3C7 131 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 WDR45Q9Y484 360 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 URGCP-MRPS24S4R325 110 aa3.8□□□□□ -1.8
SSR1-207ENST00000479485 COL14A1Q05707 1796 aaKnown RBP3.8□□□□□ -1.8
SSR1-207ENST00000479485 PLXNA1Q9UIW2 1896 aa3.79□□□□□ -1.8
SSR1-207ENST00000479485 LTBP1Q14766 1721 aa3.79□□□□□ -1.8
SSR1-207ENST00000479485 TRAV9-1A0A075B6T8 112 aa3.79□□□□□ -1.8
SSR1-207ENST00000479485 IGHV2OR16-5A0A0B4J2B6 119 aa3.79□□□□□ -1.8
SSR1-207ENST00000479485 IGHV1-69-2A0A0G2JMI3 117 aa3.79□□□□□ -1.8
SSR1-207ENST00000479485 ZNF860A6NHJ4 632 aa3.79□□□□□ -1.8
SSR1-207ENST00000479485 CPSF4LA6NMK7 179 aaKnown RBP3.79□□□□□ -1.8
SSR1-207ENST00000479485 C15orf61A6NNL5 157 aa3.79□□□□□ -1.8
SSR1-207ENST00000479485 TRAPPC2LH3BP13 241 aa3.79□□□□□ -1.8
SSR1-207ENST00000479485 H7BYZ3 331 aa3.79□□□□□ -1.8
SSR1-207ENST00000479485 K7N7A8 449 aa3.79□□□□□ -1.8
SSR1-207ENST00000479485 PIN1P1O15428 100 aa3.79□□□□□ -1.8
SSR1-207ENST00000479485 COCHO43405 550 aa3.79□□□□□ -1.8
SSR1-207ENST00000479485 LATO43561 262 aa3.79□□□□□ -1.8
SSR1-207ENST00000479485 TRAF3IP2O43734 574 aaPredicted RBP3.79□□□□□ -1.8
SSR1-207ENST00000479485 RAMP1O60894 148 aa3.79□□□□□ -1.8
SSR1-207ENST00000479485 RAMP3O60896 148 aa3.79□□□□□ -1.8
SSR1-207ENST00000479485 SMPD2O60906 423 aa3.79□□□□□ -1.8
SSR1-207ENST00000479485 SLC2A10O95528 541 aa3.79□□□□□ -1.8
SSR1-207ENST00000479485 SEMA4FO95754 770 aa3.79□□□□□ -1.8
SSR1-207ENST00000479485 HRASP01112 189 aa3.79□□□□□ -1.8
SSR1-207ENST00000479485 IGHEP01854 428 aa3.79□□□□□ -1.8
SSR1-207ENST00000479485 C1QCP02747 245 aa3.79□□□□□ -1.8
SSR1-207ENST00000479485 MRPL3P09001 348 aaKnown RBP3.79□□□□□ -1.8
SSR1-207ENST00000479485 ZNF883P0CG24 379 aa3.79□□□□□ -1.8
SSR1-207ENST00000479485 CTSEP14091 401 aa3.79□□□□□ -1.8
SSR1-207ENST00000479485 CD99P14209 185 aa3.79□□□□□ -1.8
SSR1-207ENST00000479485 RPL35AP18077 110 aaKnown RBP3.79□□□□□ -1.8
SSR1-207ENST00000479485 SGSHP51688 502 aa3.79□□□□□ -1.8
SSR1-207ENST00000479485 HMGCS2P54868 508 aa3.79□□□□□ -1.8
SSR1-207ENST00000479485 FGF8P55075 233 aaPredicted RBP3.79□□□□□ -1.8
SSR1-207ENST00000479485 TAS2R46P59540 309 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms