RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 MMP28Q9H239 520 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 LINC00574Q9H8X3 128 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 RAB9BQ9NP90 201 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 OR2S2Q9NQN1 319 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 ABCB10Q9NRK6 738 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 RHBDL2Q9NX52 303 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 GFOD1Q9NXC2 390 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 HSF4Q9ULV5 492 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 MINOS1-NBL1R4GNA1 71 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 A0A087X0M5 115 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 A0A1B0GX30 115 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 LEUTXA8MZ59 168 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 BUB1B-PAK6H3BSN5 160 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 RAB27BO00194 218 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 GPR137BO60478 399 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 NAPSAO96009 420 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 IGLV1-47P01700 117 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 TFAP2AP05549 437 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 CRYBA1P05813 215 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 CD3GP09693 182 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 HIST1H1DP16402 221 aaKnown RBP5.57□□□□□ -1.52
BRCA1-215ENST00000478531 PPP1CCP36873 323 aaKnown RBP5.57□□□□□ -1.52
BRCA1-215ENST00000478531 CEACAM3P40198 252 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 DHRS7BQ6IAN0 325 aaPredicted RBP5.57□□□□□ -1.52
BRCA1-215ENST00000478531 TMEM219Q86XT9 240 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 OR10A7Q8NGE5 316 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 OR52L2PQ8NGH6 319 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 OR5R1Q8NH85 324 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 MAFIPQ8WZ33 124 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 TOMM40LQ969M1 308 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 PTX4Q96A99 478 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 RPEQ96AT9 228 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 PHF21AQ96BD5 680 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 SLC25A38Q96DW6 304 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 MALSU1Q96EH3 234 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 MBNL3Q9NUK0 354 aaKnown RBP5.57□□□□□ -1.52
BRCA1-215ENST00000478531 ABRACLQ9P1F3 81 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 DPM3Q9P2X0 92 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 ELF5Q9UKW6 265 aaPredicted RBP5.57□□□□□ -1.52
BRCA1-215ENST00000478531 KCNK7Q9Y2U2 307 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 AMMECR1Q9Y4X0 333 aaPredicted RBP5.57□□□□□ -1.52
BRCA1-215ENST00000478531 NBEAL1Q6ZS30 2694 aa5.57□□□□□ -1.52
BRCA1-215ENST00000478531 TMEM235A6NFC5 223 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 MFNGO00587 321 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 SLC31A2O15432 143 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 GABARAPO95166 117 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 CD24P25063 80 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 REG1BP48304 166 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 ALDH3B2P48448 385 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 LOXL3P58215 753 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 HLA-DRB3P79483 266 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 MADCAM1Q13477 382 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 ARFRP1Q13795 201 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 HMGN3Q15651 99 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 CTF1Q16619 201 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 TPTE2P1Q5T6R2 138 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 CLVS1Q8IUQ0 354 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-215ENST00000478531 CROCCP3Q8IVE0 287 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 IZUMO1Q8IYV9 350 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 OR52M1Q8NGK5 317 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 SLC25A46Q96AG3 418 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 CREB3L1Q96BA8 519 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 GALMQ96C23 342 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 MEGF9Q9H1U4 602 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 ZMAT5Q9UDW3 170 aaKnown RBP5.56□□□□□ -1.52
BRCA1-215ENST00000478531 ZNF230Q9UIE0 474 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-215ENST00000478531 ETV7Q9Y603 341 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 SERPINE3A8MV23 424 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 HSD17B6O14756 317 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 HSPA12AO43301 675 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 FCGR3AP08637 254 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 TALDO1P37837 337 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 ARHGDIBP52566 201 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 DIAPH2-AS1Q14236 149 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 CDNFQ49AH0 187 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 SAMD12Q8N8I0 201 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 NUDCD2Q8WVJ2 157 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 ABHD14AQ9BUJ0 271 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 RIMS4Q9H426 269 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-215ENST00000478531 SLC23A1Q9UHI7 598 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 SCOCQ9UIL1 159 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 JPT1Q9UK76 154 aa5.56□□□□□ -1.52
BRCA1-215ENST00000478531 TRBV6-6A0A0A6YYG2 114 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 CHST1O43916 411 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 NOL3O60936 208 aaKnown RBP5.55□□□□□ -1.52
BRCA1-215ENST00000478531 SCGNO76038 276 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 HKR1P10072 659 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 BTF3P20290 206 aaKnown RBP5.55□□□□□ -1.52
BRCA1-215ENST00000478531 IL3RAP26951 378 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 MNDAP41218 407 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 ZNF134P52741 427 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 RAG2P55895 527 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 SCAND1P57086 179 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 RELBQ01201 579 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 AANATQ16613 207 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 TMEM30BQ3MIR4 351 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 MORN2Q502X0 79 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 UBE2NLQ5JXB2 153 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 CCDC144NLQ6NUI1 221 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 ZNF880Q6PDB4 577 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms