RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 VAMP2P63027 116 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 DEFB109BQ30KR1 87 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 BOLLQ8N9W6 283 aaKnown RBP10.3□□□□□ -0.76
PTPRF-212ENST00000477970 RAB40CQ96S21 281 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 SCRT1Q9BWW7 348 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 K7N7A8 449 aa10.29□□□□□ -0.76
PTPRF-212ENST00000477970 ZNF718Q3SXZ3 478 aa10.29□□□□□ -0.76
PTPRF-212ENST00000477970 DPPA3Q6W0C5 159 aa10.29□□□□□ -0.76
PTPRF-212ENST00000477970 ACP7Q6ZNF0 438 aa10.29□□□□□ -0.76
PTPRF-212ENST00000477970 BHLHA15Q7RTS1 189 aaPredicted RBP10.29□□□□□ -0.76
PTPRF-212ENST00000477970 CXorf67Q86X51 503 aaPredicted RBP10.29□□□□□ -0.76
PTPRF-212ENST00000477970 FAM90A1Q86YD7 464 aa10.29□□□□□ -0.76
PTPRF-212ENST00000477970 TAAR6Q96RI8 345 aa10.29□□□□□ -0.76
PTPRF-212ENST00000477970 COA4Q9NYJ1 87 aa10.29□□□□□ -0.76
PTPRF-212ENST00000477970 OOEPA6NGQ2 149 aa10.29□□□□□ -0.76
PTPRF-212ENST00000477970 OR5H1A6NKK0 313 aa10.29□□□□□ -0.76
PTPRF-212ENST00000477970 H0YL77 283 aa10.29□□□□□ -0.76
PTPRF-212ENST00000477970 SERPINE2P07093 398 aa10.29□□□□□ -0.76
PTPRF-212ENST00000477970 TAS2R30P59541 319 aa10.29□□□□□ -0.76
PTPRF-212ENST00000477970 EIF4EBP1Q13541 118 aaPredicted RBP10.29□□□□□ -0.76
PTPRF-212ENST00000477970 GUCA2BQ16661 112 aa10.29□□□□□ -0.76
PTPRF-212ENST00000477970 CXorf66Q5JRM2 361 aaPredicted RBP10.29□□□□□ -0.76
PTPRF-212ENST00000477970 Q6ZS92 163 aa10.29□□□□□ -0.76
PTPRF-212ENST00000477970 TCTEX1D1Q8N7M0 179 aa10.29□□□□□ -0.76
PTPRF-212ENST00000477970 GPR146Q96CH1 333 aa10.29□□□□□ -0.76
PTPRF-212ENST00000477970 C19orf12Q9NSK7 152 aa10.29□□□□□ -0.76
PTPRF-212ENST00000477970 SLC25A15Q9Y619 301 aa10.29□□□□□ -0.76
PTPRF-212ENST00000477970 CACNA1GO43497 2377 aa10.29□□□□□ -0.76
PTPRF-212ENST00000477970 IGHV2OR16-5A0A0B4J2B6 119 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 IGHV1-18A0A0C4DH31 117 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 FAM24AA6NFZ4 105 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 SSSCA1O60232 199 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 PAX9P55771 341 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 FOXF2Q12947 444 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 TRAT1Q6PIZ9 186 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 OR10Z1Q8NGY1 313 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 GNPNAT1Q96EK6 184 aaPredicted RBP10.28□□□□□ -0.76
PTPRF-212ENST00000477970 KCNIP1Q9NZI2 227 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 WSB1Q9Y6I7 421 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 FREM2Q5SZK8 3169 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 FAM74A7A6NL05 159 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 FAM90A26D6RGX4 464 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 WISP2O76076 250 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 CFHR2P36980 270 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 FAM74A3Q4VXF1 159 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 SP5Q6BEB4 398 aaPredicted RBP10.28□□□□□ -0.76
PTPRF-212ENST00000477970 WDR82Q6UXN9 313 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 SEM1Q6ZVN7 128 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 KPTNQ9Y664 436 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 FRYQ5TBA9 3013 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 TSPAN15O95858 294 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 IGKV1-39P01597 117 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 IGKV1D-39P04432 117 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 SFTA3P0C7M3 94 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 OR8U9P0C7N5 309 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 PSG2P11465 335 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 PAX6P26367 422 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 PEA15Q15121 130 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 ZNF645Q8N7E2 425 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 ZNF610Q8N9Z0 462 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 OR8U1Q8NH10 309 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 LURAP1Q96LR2 239 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 PARD6GQ9BYG4 376 aaPredicted RBP10.28□□□□□ -0.76
PTPRF-212ENST00000477970 NDRG3Q9UGV2 375 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 TINAGQ9UJW2 476 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 CHD8Q9HCK8 2581 aa10.28□□□□□ -0.76
PTPRF-212ENST00000477970 BTBD17A6NE02 478 aa10.27□□□□□ -0.76
PTPRF-212ENST00000477970 TOR1AO14656 332 aa10.27□□□□□ -0.76
PTPRF-212ENST00000477970 HSPA12AO43301 675 aa10.27□□□□□ -0.76
PTPRF-212ENST00000477970 AKR1C2P52895 323 aa10.27□□□□□ -0.76
PTPRF-212ENST00000477970 AKR1C1Q04828 323 aa10.27□□□□□ -0.76
PTPRF-212ENST00000477970 Q6ZR03 302 aa10.27□□□□□ -0.76
PTPRF-212ENST00000477970 ATXN7O15265 892 aaPredicted RBP10.27□□□□□ -0.77
PTPRF-212ENST00000477970 TXNL1O43396 289 aa10.27□□□□□ -0.77
PTPRF-212ENST00000477970 DFFBO76075 338 aa10.27□□□□□ -0.77
PTPRF-212ENST00000477970 AGFG2O95081 481 aa10.27□□□□□ -0.77
PTPRF-212ENST00000477970 TMEM50AO95807 157 aa10.27□□□□□ -0.77
PTPRF-212ENST00000477970 GRPP07492 148 aa10.27□□□□□ -0.77
PTPRF-212ENST00000477970 GCH1P30793 250 aa10.27□□□□□ -0.77
PTPRF-212ENST00000477970 CAMLGP49069 296 aa10.27□□□□□ -0.77
PTPRF-212ENST00000477970 RPL23AP62750 156 aaKnown RBP10.27□□□□□ -0.77
PTPRF-212ENST00000477970 MIDNQ504T8 468 aa10.27□□□□□ -0.77
PTPRF-212ENST00000477970 CLEC9AQ6UXN8 241 aa10.27□□□□□ -0.77
PTPRF-212ENST00000477970 ATP5SQ99766 215 aa10.27□□□□□ -0.77
PTPRF-212ENST00000477970 A0A0G2JRQ6 117 aa10.27□□□□□ -0.77
PTPRF-212ENST00000477970 SIGLEC5O15389 551 aa10.27□□□□□ -0.77
PTPRF-212ENST00000477970 TNFSF12O43508 249 aa10.27□□□□□ -0.77
PTPRF-212ENST00000477970 CHST1O43916 411 aa10.27□□□□□ -0.77
PTPRF-212ENST00000477970 TIMM8AO60220 97 aaPredicted RBP10.27□□□□□ -0.77
PTPRF-212ENST00000477970 PSPNO60542 156 aa10.27□□□□□ -0.77
PTPRF-212ENST00000477970 ATF4P18848 351 aaPredicted RBP10.27□□□□□ -0.77
PTPRF-212ENST00000477970 TIMP3P35625 211 aa10.27□□□□□ -0.77
PTPRF-212ENST00000477970 IGFBP7Q16270 282 aa10.27□□□□□ -0.77
PTPRF-212ENST00000477970 SMIM21Q3B7S5 101 aa10.27□□□□□ -0.77
PTPRF-212ENST00000477970 ZNF585BQ52M93 769 aa10.27□□□□□ -0.77
PTPRF-212ENST00000477970 TMEM171Q8WVE6 324 aa10.27□□□□□ -0.77
PTPRF-212ENST00000477970 GALMQ96C23 342 aa10.27□□□□□ -0.77
PTPRF-212ENST00000477970 FAM96BQ9Y3D0 163 aa10.27□□□□□ -0.77
PTPRF-212ENST00000477970 IGF2RP11717 2491 aa10.26□□□□□ -0.77
PTPRF-212ENST00000477970 CNTRLQ7Z7A1 2325 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms