RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 ZNF79Q15937 498 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 SSX2Q16385 188 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 PYDC2Q56P42 97 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 FAM76BQ5HYJ3 339 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 C9orf66Q5T8R8 295 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 STUMQ69YW2 141 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 RAB12Q6IQ22 244 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 PYHIN1Q6K0P9 492 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 Q8IYB0 196 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 IZUMO1Q8IYV9 350 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 OSR2Q8N2R0 312 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 OR56B1Q8NGI3 324 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 C15orf40Q8WUR7 153 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 MRPS24Q96EL2 167 aaKnown RBP7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 P2RX4Q99571 388 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 CCDC32Q9BV29 185 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 SELENOIQ9C0D9 397 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 LPAR5Q9H1C0 372 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 TLNRD1Q9H1K6 362 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 RHOFQ9HBH0 211 aa7.7□□□□□ -1.18
SMARCB1-206ENST00000477836 FAM90A8PA6NJQ4 464 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 CDIPTO14735 213 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 RHBDL1O75783 438 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 NXPH2O95156 264 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 PGA5P0DJD9 388 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 GABRR1P24046 479 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 MNDAP41218 407 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 NPBWR2P48146 333 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 PPP5CP53041 499 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 RBM11P57052 281 aaKnown RBP7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 ERVFRD-1P60508 538 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 RPL23AP62750 156 aaKnown RBP7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 ATPAF1Q5TC12 328 aaPredicted RBP7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 ELP2Q6IA86 826 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 ZNF788Q6ZQV5 615 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 SNX29P2Q8IUI4 249 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 C11orf53Q8IXP5 236 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 BATF2Q8N1L9 274 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 GDPD1Q8N9F7 314 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 POC1AQ8NBT0 407 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 KLHL30-AS1Q8NEE0 82 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 OR51T1Q8NGJ9 327 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 EMG1Q92979 244 aaKnown RBP7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 MED30Q96HR3 178 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 Q96M66 194 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 ZNF488Q96MN9 340 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 GAFA1Q96PS6 74 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 NRIP2Q9BQI9 281 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 TM2D1Q9BX74 207 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 SRRQ9GZT4 340 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 RBFOX1Q9NWB1 397 aaKnown RBP7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 MTCH1Q9NZJ7 389 aa7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 MRPS7Q9Y2R9 242 aaKnown RBP7.69□□□□□ -1.18
SMARCB1-206ENST00000477836 TRAV18A0A075B6X5 111 aa7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 A0A0A6YYD4 124 aa7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 XRCC3O43542 346 aa7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 TPPPO94811 219 aa7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 ARG1P05089 322 aa7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 SNRNP70P08621 437 aaKnown RBP7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 PRKACAP17612 351 aa7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 VEGFCP49767 419 aa7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 SNU13P55769 128 aaKnown RBP7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 MRPS10P82664 201 aaKnown RBP7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 MPV17LQ2QL34 196 aa7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 SMIM21Q3B7S5 101 aa7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 PIGYQ3MUY2 71 aa7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 MOGAT2Q3SYC2 334 aa7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 ABCA11PQ4W5N1 156 aa7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 NHLRC3Q5JS37 347 aa7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 TRIQKQ629K1 86 aa7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 WDR82Q6UXN9 313 aa7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 LINC00596Q86U02 117 aa7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 Q8N402 240 aa7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 CHST4Q8NCG5 386 aa7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 OR10R2Q8NGX6 335 aa7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 RAB3CQ96E17 227 aa7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 MALSU1Q96EH3 234 aa7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 SOSTQ9BQB4 213 aa7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 NICN1Q9BSH3 213 aa7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 DNTTIP1Q9H147 329 aa7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 ST3GAL6Q9Y274 331 aa7.68□□□□□ -1.18
SMARCB1-206ENST00000477836 PSMB11A5LHX3 300 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 FAM90A10PA6NDY2 464 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 FAM90A18PA6NE21 464 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 FAM90A16PA6NEW6 464 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 FAM90A20PA6NIJ5 464 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 FAM90A7PA6NKC0 464 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 SH2D7A6NKC9 451 aaPredicted RBP7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 FAM90A22PA8MWA6 464 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 FAM90A12PA8MX19 464 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 FAM90A5PA8MXJ8 464 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 FAM90A23PA8MXZ1 464 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 SEC14L6B5MCN3 397 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 H3BUI4 141 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 RAB27BO00194 218 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 GEMIN2O14893 280 aaKnown RBP7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 CTDSPLO15194 276 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 SIGLEC5O15389 551 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 AKR7A2O43488 359 aa7.67□□□□□ -1.18
SMARCB1-206ENST00000477836 NOS1APO75052 506 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms