RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 TRPM3Q9HCF6 1732 aaPredicted RBP2.75□□□□□ -1.97
VPS50-212ENST00000476413 GOLGA6L10A6NI86 522 aa2.74□□□□□ -1.97
VPS50-212ENST00000476413 ITGB1BP1O14713 200 aa2.74□□□□□ -1.97
VPS50-212ENST00000476413 PSCAO43653 123 aa2.74□□□□□ -1.97
VPS50-212ENST00000476413 CDS2O95674 445 aa2.74□□□□□ -1.97
VPS50-212ENST00000476413 PET100P0DJ07 73 aa2.74□□□□□ -1.97
VPS50-212ENST00000476413 OR12D1P0DN82 309 aa2.74□□□□□ -1.97
VPS50-212ENST00000476413 ADORA1P30542 326 aa2.74□□□□□ -1.97
VPS50-212ENST00000476413 RPL14P50914 215 aaKnown RBP2.74□□□□□ -1.97
VPS50-212ENST00000476413 DEFA6Q01524 100 aa2.74□□□□□ -1.97
VPS50-212ENST00000476413 BSPH1Q075Z2 132 aa2.74□□□□□ -1.97
VPS50-212ENST00000476413 TBC1D28Q2M2D7 210 aa2.74□□□□□ -1.97
VPS50-212ENST00000476413 TRMT12Q53H54 448 aaKnown RBP2.74□□□□□ -1.97
VPS50-212ENST00000476413 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
VPS50-212ENST00000476413 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
VPS50-212ENST00000476413 SPATA31B1PQ5VZV4 182 aa2.74□□□□□ -1.97
VPS50-212ENST00000476413 Q6ZRU5 148 aa2.74□□□□□ -1.97
VPS50-212ENST00000476413 FUNDC1Q8IVP5 155 aa2.74□□□□□ -1.97
VPS50-212ENST00000476413 OR52E4Q8NGH9 312 aa2.74□□□□□ -1.97
VPS50-212ENST00000476413 OR10D4PQ8NGN7 298 aa2.74□□□□□ -1.97
VPS50-212ENST00000476413 CD200R1Q8TD46 325 aa2.74□□□□□ -1.97
VPS50-212ENST00000476413 TNFAIP8L1Q8WVP5 186 aa2.74□□□□□ -1.97
VPS50-212ENST00000476413 OR8B2Q96RD0 313 aa2.74□□□□□ -1.97
VPS50-212ENST00000476413 MCTS1Q9ULC4 181 aaKnown RBP2.74□□□□□ -1.97
VPS50-212ENST00000476413 CRB1P82279 1406 aa2.74□□□□□ -1.97
VPS50-212ENST00000476413 COL18A1P39060 1754 aa2.74□□□□□ -1.97
VPS50-212ENST00000476413 ZNF407Q9C0G0 2248 aa2.73□□□□□ -1.97
VPS50-212ENST00000476413 B4DEV8 164 aa2.73□□□□□ -1.97
VPS50-212ENST00000476413 H3BSA7 217 aa2.73□□□□□ -1.97
VPS50-212ENST00000476413 M0QYV0 167 aa2.73□□□□□ -1.97
VPS50-212ENST00000476413 SLC25A20O43772 301 aa2.73□□□□□ -1.97
VPS50-212ENST00000476413 YEATS4O95619 227 aa2.73□□□□□ -1.97
VPS50-212ENST00000476413 PSMA1P25786 263 aaKnown RBP2.73□□□□□ -1.97
VPS50-212ENST00000476413 PSMB3P49720 205 aa2.73□□□□□ -1.97
VPS50-212ENST00000476413 SULT1A2P50226 295 aa2.73□□□□□ -1.97
VPS50-212ENST00000476413 GABARAPL2P60520 117 aa2.73□□□□□ -1.97
VPS50-212ENST00000476413 C1DQ13901 141 aaKnown RBP2.73□□□□□ -1.97
VPS50-212ENST00000476413 KRTAP6-3Q3LI67 103 aa2.73□□□□□ -1.97
VPS50-212ENST00000476413 SDHAF4Q5VUM1 108 aa2.73□□□□□ -1.97
VPS50-212ENST00000476413 NOXRED1Q6NXP6 359 aa2.73□□□□□ -1.97
VPS50-212ENST00000476413 SMARCD3Q6STE5 483 aa2.73□□□□□ -1.97
VPS50-212ENST00000476413 DRAM2Q6UX65 266 aa2.73□□□□□ -1.97
VPS50-212ENST00000476413 ZBTB8OSQ8IWT0 167 aa2.73□□□□□ -1.97
VPS50-212ENST00000476413 LMX1AQ8TE12 382 aa2.73□□□□□ -1.97
VPS50-212ENST00000476413 SMIM12Q96EX1 92 aa2.73□□□□□ -1.97
VPS50-212ENST00000476413 RBP7Q96R05 134 aa2.73□□□□□ -1.97
VPS50-212ENST00000476413 HIGD2AQ9BW72 106 aa2.73□□□□□ -1.97
VPS50-212ENST00000476413 UBQLN4Q9NRR5 601 aa2.73□□□□□ -1.97
VPS50-212ENST00000476413 TP53TG1Q9Y2A0 90 aa2.73□□□□□ -1.97
VPS50-212ENST00000476413 ADAMTSL1Q8N6G6 1762 aa2.72□□□□□ -1.97
VPS50-212ENST00000476413 ATP8B1O43520 1251 aa2.72□□□□□ -1.97
VPS50-212ENST00000476413 DENRO43583 198 aaKnown RBP2.72□□□□□ -1.97
VPS50-212ENST00000476413 OCMP0CE72 109 aaPredicted RBP2.72□□□□□ -1.97
VPS50-212ENST00000476413 F8A1P23610 371 aa2.72□□□□□ -1.97
VPS50-212ENST00000476413 GABRA3P34903 492 aa2.72□□□□□ -1.97
VPS50-212ENST00000476413 TSPAN31Q12999 210 aa2.72□□□□□ -1.97
VPS50-212ENST00000476413 MESTQ5EB52 335 aa2.72□□□□□ -1.97
VPS50-212ENST00000476413 CD302Q8IX05 232 aa2.72□□□□□ -1.97
VPS50-212ENST00000476413 DNAJB3Q8WWF6 145 aa2.72□□□□□ -1.97
VPS50-212ENST00000476413 PPCDCQ96CD2 204 aa2.72□□□□□ -1.97
VPS50-212ENST00000476413 GNB1LQ9BYB4 327 aa2.72□□□□□ -1.97
VPS50-212ENST00000476413 LINC00527Q9UJ94 153 aa2.72□□□□□ -1.97
VPS50-212ENST00000476413 PLXNB1O43157 2135 aa2.71□□□□□ -1.98
VPS50-212ENST00000476413 METTL15A6NJ78 407 aa2.71□□□□□ -1.98
VPS50-212ENST00000476413 E7EQL1 145 aa2.71□□□□□ -1.98
VPS50-212ENST00000476413 K7EQS6 105 aa2.71□□□□□ -1.98
VPS50-212ENST00000476413 COCHO43405 550 aa2.71□□□□□ -1.98
VPS50-212ENST00000476413 ATP6V1G2O95670 118 aa2.71□□□□□ -1.98
VPS50-212ENST00000476413 FBP1P09467 338 aa2.71□□□□□ -1.98
VPS50-212ENST00000476413 AGTR1P30556 359 aa2.71□□□□□ -1.98
VPS50-212ENST00000476413 MAP3K7CLP57077 242 aa2.71□□□□□ -1.98
VPS50-212ENST00000476413 LINC00313P59037 77 aa2.71□□□□□ -1.98
VPS50-212ENST00000476413 CLEC12BQ2HXU8 276 aa2.71□□□□□ -1.98
VPS50-212ENST00000476413 HLA-DRB5Q30154 266 aa2.71□□□□□ -1.98
VPS50-212ENST00000476413 MSRB3Q8IXL7 192 aa2.71□□□□□ -1.98
VPS50-212ENST00000476413 EBNA1BP2Q99848 306 aaKnown RBP2.71□□□□□ -1.98
VPS50-212ENST00000476413 C1QTNF6Q9BXI9 259 aa2.71□□□□□ -1.98
VPS50-212ENST00000476413 VPREB3Q9UKI3 123 aa2.71□□□□□ -1.98
VPS50-212ENST00000476413 WASHC3Q9Y3C0 194 aa2.71□□□□□ -1.98
VPS50-212ENST00000476413 MRPS16Q9Y3D3 137 aaKnown RBP2.71□□□□□ -1.98
VPS50-212ENST00000476413 KMT2EQ8IZD2 1858 aa2.71□□□□□ -1.98
VPS50-212ENST00000476413 RIMS2Q9UQ26 1411 aa2.7□□□□□ -1.98
VPS50-212ENST00000476413 DAPL1A0PJW8 107 aa2.7□□□□□ -1.98
VPS50-212ENST00000476413 SDHAF1A6NFY7 115 aa2.7□□□□□ -1.98
VPS50-212ENST00000476413 F5H5T6 163 aa2.7□□□□□ -1.98
VPS50-212ENST00000476413 CCRL2O00421 344 aa2.7□□□□□ -1.98
VPS50-212ENST00000476413 ARL6IP5O75915 188 aa2.7□□□□□ -1.98
VPS50-212ENST00000476413 CTSGP08311 255 aa2.7□□□□□ -1.98
VPS50-212ENST00000476413 CRABP1P29762 137 aa2.7□□□□□ -1.98
VPS50-212ENST00000476413 CD40LGP29965 261 aa2.7□□□□□ -1.98
VPS50-212ENST00000476413 PLEKHG7Q6ZR37 379 aa2.7□□□□□ -1.98
VPS50-212ENST00000476413 OR10P1Q8NGE3 313 aa2.7□□□□□ -1.98
VPS50-212ENST00000476413 DCUN1D5Q9BTE7 237 aa2.7□□□□□ -1.98
VPS50-212ENST00000476413 TMEM208Q9BTX3 173 aa2.7□□□□□ -1.98
VPS50-212ENST00000476413 BCL2L14Q9BZR8 327 aa2.7□□□□□ -1.98
VPS50-212ENST00000476413 METTL9Q9H1A3 318 aa2.7□□□□□ -1.98
VPS50-212ENST00000476413 IGSF23A1L1A6 192 aa2.69□□□□□ -1.98
VPS50-212ENST00000476413 ORM2P19652 201 aa2.69□□□□□ -1.98
VPS50-212ENST00000476413 EMP2P54851 167 aa2.69□□□□□ -1.98
VPS50-212ENST00000476413 SMAGPQ0VAQ4 97 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms