RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 CEACAM3P40198 252 aa23.96■■□□□ 1.43
HOXB3-208ENST00000476342 GNG2P59768 71 aa23.96■■□□□ 1.43
HOXB3-208ENST00000476342 TMEM86BQ8N661 226 aa23.96■■□□□ 1.43
HOXB3-208ENST00000476342 IL1F10Q8WWZ1 152 aa23.96■■□□□ 1.43
HOXB3-208ENST00000476342 DPAGT1Q9H3H5 408 aa23.96■■□□□ 1.43
HOXB3-208ENST00000476342 POMT1Q9Y6A1 747 aa23.96■■□□□ 1.43
HOXB3-208ENST00000476342 LEUTXA8MZ59 168 aa23.95■■□□□ 1.42
HOXB3-208ENST00000476342 XRCC3O43542 346 aa23.95■■□□□ 1.42
HOXB3-208ENST00000476342 APOA1P02647 267 aa23.95■■□□□ 1.42
HOXB3-208ENST00000476342 C8orf31Q8N9H6 132 aa23.95■■□□□ 1.42
HOXB3-208ENST00000476342 CCDC59Q9P031 241 aaKnown RBP23.95■■□□□ 1.42
HOXB3-208ENST00000476342 ELF5Q9UKW6 265 aaPredicted RBP23.95■■□□□ 1.42
HOXB3-208ENST00000476342 BTBD17A6NE02 478 aa23.94■■□□□ 1.42
HOXB3-208ENST00000476342 BUB1B-PAK6H3BSN5 160 aa23.94■■□□□ 1.42
HOXB3-208ENST00000476342 CLDN34H7C241 214 aa23.94■■□□□ 1.42
HOXB3-208ENST00000476342 RGS11O94810 467 aa23.94■■□□□ 1.42
HOXB3-208ENST00000476342 DTYMKP23919 212 aa23.94■■□□□ 1.42
HOXB3-208ENST00000476342 MNDAP41218 407 aa23.94■■□□□ 1.42
HOXB3-208ENST00000476342 KIR2DS4P43632 304 aa23.94■■□□□ 1.42
HOXB3-208ENST00000476342 KIR2DS1Q14954 304 aa23.94■■□□□ 1.42
HOXB3-208ENST00000476342 SLC9A3R2Q15599 337 aa23.94■■□□□ 1.42
HOXB3-208ENST00000476342 SSX2Q16385 188 aa23.94■■□□□ 1.42
HOXB3-208ENST00000476342 STEAP3Q658P3 488 aa23.94■■□□□ 1.42
HOXB3-208ENST00000476342 OR10V1Q8NGI7 309 aa23.94■■□□□ 1.42
HOXB3-208ENST00000476342 OR10X1Q8NGY0 326 aa23.94■■□□□ 1.42
HOXB3-208ENST00000476342 DYNC2LI1Q8TCX1 351 aa23.94■■□□□ 1.42
HOXB3-208ENST00000476342 TRDCB7Z8K6 153 aa23.93■■□□□ 1.42
HOXB3-208ENST00000476342 IER3P46695 156 aa23.93■■□□□ 1.42
HOXB3-208ENST00000476342 UBA52P62987 128 aaKnown RBP23.93■■□□□ 1.42
HOXB3-208ENST00000476342 TMEM69Q5SWH9 247 aa23.93■■□□□ 1.42
HOXB3-208ENST00000476342 LDLRAD2Q5SZI1 272 aa23.93■■□□□ 1.42
HOXB3-208ENST00000476342 C5orf24Q7Z6I8 188 aa23.93■■□□□ 1.42
HOXB3-208ENST00000476342 LINC00311Q8N616 119 aa23.93■■□□□ 1.42
HOXB3-208ENST00000476342 ZFAND2BQ8WV99 257 aa23.93■■□□□ 1.42
HOXB3-208ENST00000476342 DUX5Q96PT3 197 aa23.93■■□□□ 1.42
HOXB3-208ENST00000476342 RBM38Q9H0Z9 239 aaKnown RBP23.93■■□□□ 1.42
HOXB3-208ENST00000476342 HILPDAQ9Y5L2 63 aa23.93■■□□□ 1.42
HOXB3-208ENST00000476342 ATRQ13535 2644 aa23.93■■□□□ 1.42
HOXB3-208ENST00000476342 EIF4EP06730 217 aaKnown RBP23.93■■□□□ 1.42
HOXB3-208ENST00000476342 SRSF2Q01130 221 aaKnown RBP23.93■■□□□ 1.42
HOXB3-208ENST00000476342 AANATQ16613 207 aa23.93■■□□□ 1.42
HOXB3-208ENST00000476342 SRSF7Q16629 238 aaKnown RBP eCLIP23.93■■□□□ 1.42
HOXB3-208ENST00000476342 LRRC75BQ2VPJ9 315 aa23.93■■□□□ 1.42
HOXB3-208ENST00000476342 IZUMO1Q8IYV9 350 aa23.93■■□□□ 1.42
HOXB3-208ENST00000476342 OR52L2PQ8NGH6 319 aa23.93■■□□□ 1.42
HOXB3-208ENST00000476342 NUDCD2Q8WVJ2 157 aa23.93■■□□□ 1.42
HOXB3-208ENST00000476342 RSL24D1Q9UHA3 163 aaKnown RBP23.93■■□□□ 1.42
HOXB3-208ENST00000476342 HPGDSO60760 199 aa23.92■■□□□ 1.42
HOXB3-208ENST00000476342 MORN2Q502X0 79 aa23.92■■□□□ 1.42
HOXB3-208ENST00000476342 OR5R1Q8NH85 324 aa23.92■■□□□ 1.42
HOXB3-208ENST00000476342 AUNIPQ9H7T9 357 aa23.92■■□□□ 1.42
HOXB3-208ENST00000476342 ZNF230Q9UIE0 474 aaPredicted RBP23.92■■□□□ 1.42
HOXB3-208ENST00000476342 SMIM31A0A1B0GVY4 71 aa23.91■■□□□ 1.42
HOXB3-208ENST00000476342 A0A1W2PPE3 182 aa23.91■■□□□ 1.42
HOXB3-208ENST00000476342 ZNF701M0R085 212 aaPredicted RBP23.91■■□□□ 1.42
HOXB3-208ENST00000476342 YPEL1O60688 119 aa23.91■■□□□ 1.42
HOXB3-208ENST00000476342 IGHV4-59P01825 116 aa23.91■■□□□ 1.42
HOXB3-208ENST00000476342 SCTP09683 121 aa23.91■■□□□ 1.42
HOXB3-208ENST00000476342 ARHGDIBP52566 201 aa23.91■■□□□ 1.42
HOXB3-208ENST00000476342 MADCAM1Q13477 382 aa23.91■■□□□ 1.42
HOXB3-208ENST00000476342 GNMTQ14749 295 aa23.91■■□□□ 1.42
HOXB3-208ENST00000476342 FAM53AQ6NSI3 398 aaPredicted RBP23.91■■□□□ 1.42
HOXB3-208ENST00000476342 Q6ZS49 121 aa23.91■■□□□ 1.42
HOXB3-208ENST00000476342 DYNAPQ8N1N2 210 aa23.91■■□□□ 1.42
HOXB3-208ENST00000476342 OR4A4PQ8NGN8 299 aa23.91■■□□□ 1.42
HOXB3-208ENST00000476342 YPEL2Q96QA6 119 aa23.91■■□□□ 1.42
HOXB3-208ENST00000476342 SSX3Q99909 188 aa23.91■■□□□ 1.42
HOXB3-208ENST00000476342 OCSTAMPQ9BR26 566 aa23.91■■□□□ 1.42
HOXB3-208ENST00000476342 SLC23A1Q9UHI7 598 aa23.91■■□□□ 1.42
HOXB3-208ENST00000476342 FABP7O15540 132 aa23.9■■□□□ 1.42
HOXB3-208ENST00000476342 HSPA12AO43301 675 aa23.9■■□□□ 1.42
HOXB3-208ENST00000476342 RNASE1P07998 156 aaKnown RBP23.9■■□□□ 1.42
HOXB3-208ENST00000476342 ZBTB25P24278 435 aa23.9■■□□□ 1.42
HOXB3-208ENST00000476342 PAX6P26367 422 aa23.9■■□□□ 1.42
HOXB3-208ENST00000476342 PPP1CCP36873 323 aaKnown RBP23.9■■□□□ 1.42
HOXB3-208ENST00000476342 KRTAP21-3Q3LHN1 58 aa23.9■■□□□ 1.42
HOXB3-208ENST00000476342 LY6G6FQ5SQ64 297 aa23.9■■□□□ 1.42
HOXB3-208ENST00000476342 TPTE2P1Q5T6R2 138 aa23.9■■□□□ 1.42
HOXB3-208ENST00000476342 SLC25A48Q6ZT89 311 aaKnown RBP23.9■■□□□ 1.42
HOXB3-208ENST00000476342 ZNF439Q8NDP4 499 aa23.9■■□□□ 1.42
HOXB3-208ENST00000476342 MAFIPQ8WZ33 124 aa23.9■■□□□ 1.42
HOXB3-208ENST00000476342 RPEQ96AT9 228 aa23.9■■□□□ 1.42
HOXB3-208ENST00000476342 ABCB10Q9NRK6 738 aa23.9■■□□□ 1.42
HOXB3-208ENST00000476342 TNFRSF19Q9NS68 423 aa23.9■■□□□ 1.42
HOXB3-208ENST00000476342 VGLL3A8MV65 326 aa23.89■■□□□ 1.41
HOXB3-208ENST00000476342 OOSP1A8MZH6 123 aa23.89■■□□□ 1.41
HOXB3-208ENST00000476342 FAM25AB3EWG3 89 aa23.89■■□□□ 1.41
HOXB3-208ENST00000476342 FAM25CB3EWG5 89 aa23.89■■□□□ 1.41
HOXB3-208ENST00000476342 FAM25GB3EWG6 89 aa23.89■■□□□ 1.41
HOXB3-208ENST00000476342 ELK1P19419 428 aa23.89■■□□□ 1.41
HOXB3-208ENST00000476342 IL3RAP26951 378 aa23.89■■□□□ 1.41
HOXB3-208ENST00000476342 TAS2R20P59543 309 aa23.89■■□□□ 1.41
HOXB3-208ENST00000476342 CCDC144NLQ6NUI1 221 aa23.89■■□□□ 1.41
HOXB3-208ENST00000476342 H3BUX3 64 aa23.88■■□□□ 1.41
HOXB3-208ENST00000476342 PLA1AQ53H76 456 aa23.88■■□□□ 1.41
HOXB3-208ENST00000476342 TOMM40LQ969M1 308 aa23.88■■□□□ 1.41
HOXB3-208ENST00000476342 ABHD14AQ9BUJ0 271 aa23.88■■□□□ 1.41
HOXB3-208ENST00000476342 ST6GALNAC5Q9BVH7 336 aa23.88■■□□□ 1.41
HOXB3-208ENST00000476342 LY6LH3BQJ8 138 aa23.87■■□□□ 1.41
HOXB3-208ENST00000476342 RGS5O15539 181 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms