RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 RPA2P15927 270 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 RAB3AP20336 220 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 ZBTB25P24278 435 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 LAP3P28838 519 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 HSD11B1P28845 292 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 HRH1P35367 487 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 ALDH3B1P43353 468 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 OR3A4PP47883 348 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 LUMP51884 338 aaPredicted RBP3.53□□□□□ -1.84
VPS13D-206ENST00000476045 ARHGDIBP52566 201 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 UCP2P55851 309 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 HILS1P60008 231 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 VAMP2P63027 116 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 DEFA5Q01523 94 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 SSBP1Q04837 148 aaKnown RBP3.53□□□□□ -1.84
VPS13D-206ENST00000476045 BAMBIQ13145 260 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 DHRS2Q13268 280 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 UNC119Q13432 240 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 PPP1R1AQ13522 171 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 MEF2DQ14814 521 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 SLC9A3R2Q15599 337 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 SGCAQ16586 387 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 TMEM155Q4W5P6 130 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 DMRTC1Q5HYR2 192 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 PABPC1L2AQ5JQF8 200 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 FAM27BQ5VT28 67 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 AWAT2Q6E213 333 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 ELP2Q6IA86 826 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 ATRAIDQ6UW56 229 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 C16orf54Q6UWD8 224 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 GLIPR1L1Q6UWM5 242 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 C12orf54Q6X4T0 127 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 FAM57BQ71RH2 274 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 OR2W3Q7Z3T1 314 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 HSD17B13Q7Z5P4 300 aaPredicted RBP3.53□□□□□ -1.84
VPS13D-206ENST00000476045 SLC51BQ86UW2 128 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 SLC25A42Q86VD7 318 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 ANGPTL5Q86XS5 388 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 SKA3Q8IX90 412 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 PAQR4Q8N4S7 273 aaPredicted RBP3.53□□□□□ -1.84
VPS13D-206ENST00000476045 KCNRGQ8N5I3 272 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 ZNF283Q8N7M2 679 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 BPIFCQ8NFQ6 507 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 OR10S1Q8NGN2 331 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 OR5M8Q8NGP6 311 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 OR10R2Q8NGX6 335 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 OR2AJ1Q8NGZ0 328 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 OR1S1Q8NH92 325 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 OR51E1Q8TCB6 317 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 MARCH1Q8TCQ1 289 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 NPRL2Q8WTW4 380 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 RNF133Q8WVZ7 376 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 AQP3Q92482 292 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 NABP1Q96AH0 204 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 PGAM5Q96HS1 289 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 POM121L2Q96KW2 1035 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 NICN1Q9BSH3 213 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 OR2H1Q9GZK4 316 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 CST11Q9H112 138 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 ALX4Q9H161 411 aaPredicted RBP3.53□□□□□ -1.84
VPS13D-206ENST00000476045 WDR13Q9H1Z4 485 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 PPA2Q9H2U2 334 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 MED9Q9NWA0 146 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 RASL12Q9NYN1 266 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 TAAR3PQ9P1P4 343 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 MRPS28Q9Y2Q9 187 aaKnown RBP3.53□□□□□ -1.84
VPS13D-206ENST00000476045 TGP01266 2768 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 ARHGAP32A7KAX9 2087 aa3.53□□□□□ -1.84
VPS13D-206ENST00000476045 VWFP04275 2813 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 A0A0A6YYH2 397 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 A0A0D9SG52 128 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 A0A1B0GW55 424 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 A0A1W2PP11 408 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 C5orf49A4QMS7 147 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 OR6C6A6NF89 314 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 A6NJ64 397 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 KRBOX1C9JBD0 128 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 RAB27BO00194 218 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 SOCS1O15524 211 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 SGCEO43556 437 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 TIMM8AO60220 97 aaPredicted RBP3.52□□□□□ -1.85
VPS13D-206ENST00000476045 CRTAPO75718 401 aaPredicted RBP3.52□□□□□ -1.85
VPS13D-206ENST00000476045 ACTL6BO94805 426 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 FSTL3O95633 263 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 IGLV2-14P01704 120 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 IGHV1-46P01743 117 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 APOC3P02656 99 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 TK1P04183 234 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 ISG15P05161 165 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 MELTFP08582 738 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 HCKP08631 526 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 DUX4L2P0CJ85 424 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 DUX4L3P0CJ86 424 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 DUX4L4P0CJ87 422 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 DUX4L5P0CJ88 424 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 DUX4L6P0CJ89 424 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 DUX4L7P0CJ90 424 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 PPIAL4GP0DN37 164 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 MGMTP16455 207 aa3.52□□□□□ -1.85
VPS13D-206ENST00000476045 ZNF32P17041 273 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms