RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 ARL2BPQ9Y2Y0 163 aa3.14□□□□□ -1.91
SDHB-205ENST00000475506 SLC22A7Q9Y694 548 aa3.14□□□□□ -1.91
SDHB-205ENST00000475506 CFTRP13569 1480 aa3.14□□□□□ -1.91
SDHB-205ENST00000475506 PZPP20742 1482 aa3.14□□□□□ -1.91
SDHB-205ENST00000475506 IFT140Q96RY7 1462 aa3.14□□□□□ -1.91
SDHB-205ENST00000475506 THADAQ6YHU6 1953 aa3.14□□□□□ -1.91
SDHB-205ENST00000475506 PPRC1Q5VV67 1664 aaKnown RBP3.14□□□□□ -1.91
SDHB-205ENST00000475506 ADGBQ8N7X0 1667 aa3.14□□□□□ -1.91
SDHB-205ENST00000475506 CDK13Q14004 1512 aaKnown RBP3.14□□□□□ -1.91
SDHB-205ENST00000475506 KDM6BO15054 1643 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 TRAV40A0A0B4J280 105 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 TINCRA0A1B0GVN0 87 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 CCDC160A6NGH7 325 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 TMEM114B3SHH9 223 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 PFDN6O15212 129 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 IGKV3-11P04433 115 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 HIST1H1CP16403 213 aaKnown RBP3.13□□□□□ -1.91
SDHB-205ENST00000475506 F8A1P23610 371 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 ADORA1P30542 326 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 RCVRNP35243 200 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 TGFBR2P37173 567 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 ACTR1BP42025 376 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 CBX5P45973 191 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 IDH2P48735 452 aaKnown RBP3.13□□□□□ -1.91
SDHB-205ENST00000475506 ZNF83P51522 516 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 MP68P56378 58 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 RPL26P61254 145 aaKnown RBP3.13□□□□□ -1.91
SDHB-205ENST00000475506 SPA17Q15506 151 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 LAIR2Q6ISS4 152 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 ADM2Q7Z4H4 148 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 SLC13A5Q86YT5 568 aaPredicted RBP3.13□□□□□ -1.91
SDHB-205ENST00000475506 ZFP82Q8N141 532 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 APCDD1LQ8NCL9 501 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 OR8A1Q8NGG7 326 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 STOML3Q8TAV4 291 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 RASSF5Q8WWW0 418 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 RBPMSQ93062 196 aaKnown RBP3.13□□□□□ -1.91
SDHB-205ENST00000475506 CLDN23Q96B33 292 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 CAPZA3Q96KX2 299 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 CEP19Q96LK0 163 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 TSSK6Q9BXA6 273 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 PARD6GQ9BYG4 376 aaPredicted RBP3.13□□□□□ -1.91
SDHB-205ENST00000475506 VSIRQ9H7M9 311 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 ZNF586Q9NXT0 402 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 GUCA1BQ9UMX6 200 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 TP53TG1Q9Y2A0 90 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 IQSEC2Q5JU85 1478 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 WDR7Q9Y4E6 1490 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 CLUHO75153 1309 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 ARHGEF11O15085 1522 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 EFCAB6Q5THR3 1501 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 LMTK2Q8IWU2 1503 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 DISP1Q96F81 1524 aa3.13□□□□□ -1.91
SDHB-205ENST00000475506 NUP155O75694 1391 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 CPSF1Q10570 1443 aaKnown RBP3.12□□□□□ -1.91
SDHB-205ENST00000475506 KDM5AP29375 1690 aaKnown RBP3.12□□□□□ -1.91
SDHB-205ENST00000475506 GRIN2BQ13224 1484 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 MAGI2Q86UL8 1455 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 IGHV3-43A0A0B4J1X8 118 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 ZNF98A6NK75 572 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 CCRL2O00421 344 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 DCTN3O75935 186 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 KLHL2O95198 593 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 S100A6P06703 90 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 OCM2P0CE71 109 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 GABRA1P14867 456 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 AZU1P20160 251 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 S100A2P29034 98 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 EIF2B2P49770 351 aaKnown RBP3.12□□□□□ -1.91
SDHB-205ENST00000475506 NUDT2P50583 147 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 RAB2AP61019 212 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 NCALDP61601 193 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 CTAG1AP78358 180 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 RELAQ04206 551 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 SKP2Q13309 424 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 MED21Q13503 144 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 HLA-DRB5Q30154 266 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 MRPL2Q5T653 305 aaKnown RBP3.12□□□□□ -1.91
SDHB-205ENST00000475506 HES3Q5TGS1 186 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 TTC33Q6PID6 262 aaPredicted RBP3.12□□□□□ -1.91
SDHB-205ENST00000475506 NEGR1Q7Z3B1 354 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 VN1R4Q7Z5H5 301 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 ZNRF2Q8NHG8 242 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 PPCDCQ96CD2 204 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 REEP6Q96HR9 211 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 LINC00477Q96M19 166 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 SHANK2-AS3Q9BTD1 123 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 ARMC1Q9NVT9 282 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 ZNF230Q9UIE0 474 aaPredicted RBP3.12□□□□□ -1.91
SDHB-205ENST00000475506 TIMM22Q9Y584 194 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 KIAA0586Q9BVV6 1533 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 MYO3BQ8WXR4 1341 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 DNMBPQ6XZF7 1577 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 CHD2O14647 1828 aaKnown RBP3.12□□□□□ -1.91
SDHB-205ENST00000475506 ADCY9O60503 1353 aa3.12□□□□□ -1.91
SDHB-205ENST00000475506 OVOS2A0A0G2JMS6 1433 aa3.11□□□□□ -1.91
SDHB-205ENST00000475506 OVOS2A0A0J9YW53 1432 aa3.11□□□□□ -1.91
SDHB-205ENST00000475506 OVOS2Q6IE36 1432 aa3.11□□□□□ -1.91
SDHB-205ENST00000475506 TRAPPC8Q9Y2L5 1435 aa3.11□□□□□ -1.91
SDHB-205ENST00000475506 CASZ1Q86V15 1759 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms