RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 IFITM10A6NMD0 228 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 IDH3GP51553 393 aaPredicted RBP10.58□□□□□ -0.72
RNF220-211ENST00000474956 VAMP2P63027 116 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 DLK1P80370 383 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 HAGHQ16775 308 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 PIP4P1Q86T03 277 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 WDR86Q86TI4 376 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 ZNF695Q8IW36 515 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 Q8WTZ3 238 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 TVP23CQ96ET8 276 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 NIPSNAP3BQ9BS92 247 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 ASCL3Q9NQ33 180 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 RFNGQ9Y644 331 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 IGKV1D-13A0A0B4J2D9 117 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 SCAF4O95104 1147 aaKnown RBP10.58□□□□□ -0.72
RNF220-211ENST00000474956 IGKV1-13P0DP09 117 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 FUT3P21217 361 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 OMGP23515 440 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 CEBPGP53567 150 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 ZNF506Q5JVG8 444 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 NEK7Q8TDX7 302 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 TMEM171Q8WVE6 324 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 APOBEC3DQ96AK3 386 aaPredicted RBP10.58□□□□□ -0.72
RNF220-211ENST00000474956 RBMXL1Q96E39 390 aaKnown RBP10.58□□□□□ -0.72
RNF220-211ENST00000474956 TMEM56Q96MV1 263 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 TRIB1Q96RU8 372 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 FZR1Q9UM11 496 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 UBE2J1Q9Y385 318 aaPredicted RBP10.58□□□□□ -0.72
RNF220-211ENST00000474956 WSB1Q9Y6I7 421 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 TMEM56-RWDD3S4R434 201 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 IGKV1-6A0A0C4DH72 117 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 H0YL77 283 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 TNFSF12O43508 249 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 SS18L1O75177 396 aaPredicted RBP10.58□□□□□ -0.72
RNF220-211ENST00000474956 FOXF2Q12947 444 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 CEACAM21Q3KPI0 293 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 FBXW9Q5XUX1 488 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 SP5Q6BEB4 398 aaPredicted RBP10.58□□□□□ -0.72
RNF220-211ENST00000474956 CNEP1R1Q8N9A8 125 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 OR5C1Q8NGR4 320 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 BCL2L2Q92843 193 aaPredicted RBP10.58□□□□□ -0.72
RNF220-211ENST00000474956 OR2J1Q9GZK6 312 aa10.58□□□□□ -0.72
RNF220-211ENST00000474956 SEC14L6B5MCN3 397 aa10.57□□□□□ -0.72
RNF220-211ENST00000474956 SSSCA1O60232 199 aa10.57□□□□□ -0.72
RNF220-211ENST00000474956 CXCL1P09341 107 aa10.57□□□□□ -0.72
RNF220-211ENST00000474956 IGHV1-2P23083 117 aa10.57□□□□□ -0.72
RNF220-211ENST00000474956 ICAM4Q14773 271 aa10.57□□□□□ -0.72
RNF220-211ENST00000474956 ALKBH2Q6NS38 261 aa10.57□□□□□ -0.72
RNF220-211ENST00000474956 FAM53AQ6NSI3 398 aaPredicted RBP10.57□□□□□ -0.72
RNF220-211ENST00000474956 VWA1Q6PCB0 445 aa10.57□□□□□ -0.72
RNF220-211ENST00000474956 DPPA2Q7Z7J5 298 aa10.57□□□□□ -0.72
RNF220-211ENST00000474956 PROB1E7EW31 1015 aa10.57□□□□□ -0.72
RNF220-211ENST00000474956 HBE1P02100 147 aa10.57□□□□□ -0.72
RNF220-211ENST00000474956 TLE4Q04727 773 aa10.57□□□□□ -0.72
RNF220-211ENST00000474956 BAXQ07812 192 aa10.57□□□□□ -0.72
RNF220-211ENST00000474956 RNPS1Q15287 305 aaKnown RBP10.57□□□□□ -0.72
RNF220-211ENST00000474956 AKR1C8PQ5T2L2 129 aa10.57□□□□□ -0.72
RNF220-211ENST00000474956 ZNF343Q6P1L6 599 aa10.57□□□□□ -0.72
RNF220-211ENST00000474956 SLC35E3Q7Z769 313 aa10.57□□□□□ -0.72
RNF220-211ENST00000474956 CXorf67Q86X51 503 aaPredicted RBP10.57□□□□□ -0.72
RNF220-211ENST00000474956 CYB561D1Q8N8Q1 229 aa10.57□□□□□ -0.72
RNF220-211ENST00000474956 OR13D1Q8NGV5 346 aa10.57□□□□□ -0.72
RNF220-211ENST00000474956 HIPK2Q9H2X6 1198 aa10.57□□□□□ -0.72
RNF220-211ENST00000474956 ZDHHC11Q9H8X9 412 aa10.57□□□□□ -0.72
RNF220-211ENST00000474956 ZNF391Q9UJN7 358 aa10.57□□□□□ -0.72
RNF220-211ENST00000474956 PTPRBP23467 1997 aa10.57□□□□□ -0.72
RNF220-211ENST00000474956 RD3LP0DJH9 198 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 MMP9P14780 707 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 GNRHRP30968 328 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 CEBPDP49716 269 aaPredicted RBP10.56□□□□□ -0.72
RNF220-211ENST00000474956 ERVFRD-1P60508 538 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 C9orf152Q5JTZ5 239 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 CEACAM1P13688 526 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 APLNRP35414 380 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 GLIPR1P48060 266 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 DYNLT3P51808 116 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 PLP2Q04941 152 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 DEFB109BQ30KR1 87 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 NRN1LQ496H8 165 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 KHDC3LQ587J8 217 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 TBC1D26Q86UD7 250 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 PRR18Q8N4B5 295 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 OR5P3Q8WZ94 311 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 GLRX2Q9NS18 164 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 URGCP-MRPS24S4R325 110 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 DUXBA0A1W2PPF3 345 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 GALR2O43603 387 aaPredicted RBP10.56□□□□□ -0.72
RNF220-211ENST00000474956 HIST1H2BKO60814 126 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 HIST1H2BJP06899 126 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 HIST1H2BOP23527 126 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 HIST1H2BBP33778 126 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 HIST1H2BDP58876 126 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 HIST1H2BCP62807 126 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 DEFA6Q01524 100 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 HIST2H2BEQ16778 126 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 CXorf66Q5JRM2 361 aaPredicted RBP10.56□□□□□ -0.72
RNF220-211ENST00000474956 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.56□□□□□ -0.72
RNF220-211ENST00000474956 DPPA3Q6W0C5 159 aa10.56□□□□□ -0.72
RNF220-211ENST00000474956 SELENOHQ8IZQ5 122 aaKnown RBP10.56□□□□□ -0.72
RNF220-211ENST00000474956 ZNF383Q8NA42 475 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms