RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 SIKE1Q9BRV8 207 aa1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 C11orf49Q9H6J7 331 aa1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 METTL17Q9H7H0 456 aaPredicted RBP1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 CHMP5Q9NZZ3 219 aa1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 CLEC2DQ9UHP7 191 aa1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 SNX12Q9UMY4 172 aa1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 MUC6Q6W4X9 2439 aa1.11□□□□□ -2.23
ECHDC1-213ENST00000474240 SLIT2O94813 1529 aa1.11□□□□□ -2.23
ECHDC1-213ENST00000474240 VPS37CA5D8V6 355 aaPredicted RBP1.11□□□□□ -2.23
ECHDC1-213ENST00000474240 TMEM235A6NFC5 223 aa1.11□□□□□ -2.23
ECHDC1-213ENST00000474240 C2orf74A8MZ97 194 aa1.11□□□□□ -2.23
ECHDC1-213ENST00000474240 M0QYV0 167 aa1.11□□□□□ -2.23
ECHDC1-213ENST00000474240 SULT1C2O00338 296 aa1.11□□□□□ -2.23
ECHDC1-213ENST00000474240 SHOX2O60902 331 aaPredicted RBP1.11□□□□□ -2.23
ECHDC1-213ENST00000474240 UGT2B11O75310 529 aa1.11□□□□□ -2.23
ECHDC1-213ENST00000474240 STK16O75716 305 aa1.11□□□□□ -2.23
ECHDC1-213ENST00000474240 UAP1Q16222 522 aaPredicted RBP1.11□□□□□ -2.23
ECHDC1-213ENST00000474240 EBLN2Q6P2I7 272 aa1.11□□□□□ -2.23
ECHDC1-213ENST00000474240 Q6ZT83 130 aa1.11□□□□□ -2.23
ECHDC1-213ENST00000474240 ZFAND2AQ8N6M9 145 aa1.11□□□□□ -2.23
ECHDC1-213ENST00000474240 OR11H1Q8NG94 326 aa1.11□□□□□ -2.23
ECHDC1-213ENST00000474240 C16orf78Q8WTQ4 265 aa1.11□□□□□ -2.23
ECHDC1-213ENST00000474240 CCDC127Q96BQ5 260 aa1.11□□□□□ -2.23
ECHDC1-213ENST00000474240 GPR22Q99680 433 aa1.11□□□□□ -2.23
ECHDC1-213ENST00000474240 PRSS27Q9BQR3 290 aa1.11□□□□□ -2.23
ECHDC1-213ENST00000474240 MIEN1Q9BRT3 115 aa1.11□□□□□ -2.23
ECHDC1-213ENST00000474240 UGT2B28Q9BY64 529 aa1.11□□□□□ -2.23
ECHDC1-213ENST00000474240 PRRG3Q9BZD7 231 aa1.11□□□□□ -2.23
ECHDC1-213ENST00000474240 EIF5A2Q9GZV4 153 aaKnown RBP1.11□□□□□ -2.23
ECHDC1-213ENST00000474240 RBMX2Q9Y388 322 aaKnown RBP1.11□□□□□ -2.23
ECHDC1-213ENST00000474240 CACNA1GO43497 2377 aa1.11□□□□□ -2.23
ECHDC1-213ENST00000474240 MYO15BQ96JP2 1530 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 RAB3GAP2Q9H2M9 1393 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 PLXNA3P51805 1871 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 KMT2EQ8IZD2 1858 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 TRPM3Q9HCF6 1732 aaPredicted RBP1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 IGLV3-9A0A075B6K5 115 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 IGHV3-73A0A0B4J1V6 119 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 H3BPC8 53 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 J3QQQ9 107 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 TNFAIP8O95379 198 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 PSMG1O95456 288 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 FADS2O95864 444 aaKnown RBP1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 CST4P01036 141 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 IGHV3-30-3P0DP02 117 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 COILP38432 576 aaPredicted RBP1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 RPL26P61254 145 aaKnown RBP1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 RELAQ04206 551 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 BSPH1Q075Z2 132 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 STX3Q13277 289 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 PDGFRLQ15198 375 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 OR4D1Q15615 310 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 USF2Q15853 346 aaPredicted RBP1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 ZBTB6Q15916 424 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 TMEM249Q2WGJ8 235 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 HSP90B2PQ58FF3 399 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 RASL11AQ6T310 242 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 FAM19A3Q7Z5A8 133 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 MTERF4Q7Z6M4 381 aaKnown RBP1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 OR4X2Q8NGF9 303 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 SMIM12Q96EX1 92 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 GTSF1LQ9H1H1 148 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 GLS2Q9UI32 602 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 NXT1Q9UKK6 140 aaKnown RBP1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 RPL26L1Q9UNX3 145 aaKnown RBP1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 SNX10Q9Y5X0 201 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 MTCH2Q9Y6C9 303 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 MAP3K19Q56UN5 1328 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 ADAMTS7Q9UKP4 1686 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 KDM5BQ9UGL1 1544 aa1.1□□□□□ -2.23
ECHDC1-213ENST00000474240 YLPM1P49750 1951 aaKnown RBP1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 MUC21A0A0G2JKD1 596 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 LOC100506127A0A0U1RQW1 187 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 MUC21A0A140T8X8 626 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 ARRDC5A6NEK1 342 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 IVLP07476 585 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 ORM2P19652 201 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 ALOX5APP20292 161 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 PVALBP20472 110 aaPredicted RBP1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 AQP5P55064 265 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 CTBP2P56545 445 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 TAS2R45P59539 299 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 DYNLL1P63167 89 aaKnown RBP1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 BTN3A2P78410 334 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 ERHP84090 104 aaKnown RBP1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 DEFA6Q01524 100 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 FOXF1Q12946 379 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 RAB31Q13636 194 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 SYCP1Q15431 976 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 PSG3Q16557 428 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 Q3ZCU0 254 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 MRPL51Q4U2R6 128 aaKnown RBP1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 CENPWQ5EE01 88 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 SCGB1D4Q6XE38 83 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 GLT6D1Q7Z4J2 308 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 ZNF283Q8N7M2 679 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 CDRT4Q8N9R6 151 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 CCDC112Q8NEF3 446 aa1.09□□□□□ -2.23
ECHDC1-213ENST00000474240 OR2Y1Q8NGV0 311 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms