RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 DOCK11Q5JSL3 2073 aa8.42□□□□□ -1.06
CASC3-204ENST00000474190 ATRQ13535 2644 aa8.42□□□□□ -1.06
CASC3-204ENST00000474190 KIAA2026Q5HYC2 2103 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 TRBV6-7A0A0A0MS04 114 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 TRAV40A0A0B4J280 105 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 IGHV1-69DA0A0B4J2H0 117 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 FABP7O15540 132 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 IGHV1-69P01742 117 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 IGHV3-7P01780 117 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 FCER2P06734 321 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 PAX6P26367 422 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 UBE2E1P51965 193 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 HTD2P86397 168 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 ARL6IP1Q15041 203 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 FBLN7Q53RD9 439 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 CT45A1Q5HYN5 189 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 C6orf183Q5T699 404 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 ZNF626Q68DY1 528 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 ZNF660Q6AZW8 331 aaPredicted RBP8.41□□□□□ -1.06
CASC3-204ENST00000474190 OR52W1Q6IF63 320 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 LHFPL4Q7Z7J7 247 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 TRAPPC6BQ86SZ2 158 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 ODF3L1Q8IXM7 274 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 CT45A3Q8NHU0 189 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 SMIM4Q8WVI0 70 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 LHX4Q969G2 390 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 C5orf30Q96GV9 206 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 ST6GALNAC5Q9BVH7 336 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 SRRQ9GZT4 340 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 GAL3ST2Q9H3Q3 398 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 SCPEP1Q9HB40 452 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 MTFP1Q9UDX5 166 aa8.41□□□□□ -1.06
CASC3-204ENST00000474190 MRPS7Q9Y2R9 242 aaKnown RBP8.41□□□□□ -1.06
CASC3-204ENST00000474190 A0A1W2PPE3 182 aa8.4□□□□□ -1.06
CASC3-204ENST00000474190 SULT1C2O00338 296 aa8.4□□□□□ -1.06
CASC3-204ENST00000474190 GSTZ1O43708 216 aaPredicted RBP8.4□□□□□ -1.06
CASC3-204ENST00000474190 TUSC2O75896 110 aa8.4□□□□□ -1.06
CASC3-204ENST00000474190 LPLP06858 475 aa8.4□□□□□ -1.06
CASC3-204ENST00000474190 COX7A1P24310 79 aa8.4□□□□□ -1.06
CASC3-204ENST00000474190 PRSS3P35030 304 aa8.4□□□□□ -1.06
CASC3-204ENST00000474190 PPP1CCP36873 323 aaKnown RBP8.4□□□□□ -1.06
CASC3-204ENST00000474190 GNG2P59768 71 aa8.4□□□□□ -1.06
CASC3-204ENST00000474190 PITPNAQ00169 270 aa8.4□□□□□ -1.06
CASC3-204ENST00000474190 ARFRP1Q13795 201 aa8.4□□□□□ -1.06
CASC3-204ENST00000474190 DIAPH2-AS1Q14236 149 aa8.4□□□□□ -1.06
CASC3-204ENST00000474190 LTC4SQ16873 150 aa8.4□□□□□ -1.06
CASC3-204ENST00000474190 MORN2Q502X0 79 aa8.4□□□□□ -1.06
CASC3-204ENST00000474190 LY6G6FQ5SQ64 297 aa8.4□□□□□ -1.06
CASC3-204ENST00000474190 PYHIN1Q6K0P9 492 aa8.4□□□□□ -1.06
CASC3-204ENST00000474190 BRD3OSQ6XYD6 125 aa8.4□□□□□ -1.06
CASC3-204ENST00000474190 ABHD12Q8N2K0 398 aa8.4□□□□□ -1.06
CASC3-204ENST00000474190 C8orf31Q8N9H6 132 aa8.4□□□□□ -1.06
CASC3-204ENST00000474190 OR10V1Q8NGI7 309 aa8.4□□□□□ -1.06
CASC3-204ENST00000474190 ST6GALNAC6Q969X2 333 aa8.4□□□□□ -1.06
CASC3-204ENST00000474190 RBMXL1Q96E39 390 aaKnown RBP8.4□□□□□ -1.06
CASC3-204ENST00000474190 ZNF251Q9BRH9 671 aa8.4□□□□□ -1.06
CASC3-204ENST00000474190 IFI27L2Q9H2X8 130 aa8.4□□□□□ -1.06
CASC3-204ENST00000474190 PRDM13Q9H4Q3 707 aa8.4□□□□□ -1.06
CASC3-204ENST00000474190 CHMP1AQ9HD42 196 aaPredicted RBP8.4□□□□□ -1.06
CASC3-204ENST00000474190 ANXA10Q9UJ72 324 aa8.4□□□□□ -1.06
CASC3-204ENST00000474190 MDFIC2A0A1B0GVS7 189 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 A0A1W2PRD5 423 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 A0A1W2PRF3 423 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 A0A1W2PRM7 423 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 FABP12A6NFH5 140 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 GABARAPH6UMI1 98 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 J3QR06 171 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 SDCBPO00560 298 aaPredicted RBP8.39□□□□□ -1.07
CASC3-204ENST00000474190 YPEL1O60688 119 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 CRLF1O75462 422 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 DIRAS3O95661 229 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 IGLV2-14P01704 120 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 CD74P04233 296 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 BAK1Q16611 211 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 Q3ZCU0 254 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 RNASE12Q5GAN4 147 aaKnown RBP8.39□□□□□ -1.07
CASC3-204ENST00000474190 TRAT1Q6PIZ9 186 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 LINC00299Q6ZSB3 139 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 SLC25A48Q6ZT89 311 aaKnown RBP8.39□□□□□ -1.07
CASC3-204ENST00000474190 OVCH2Q7RTZ1 564 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 H1FOOQ8IZA3 346 aaPredicted RBP8.39□□□□□ -1.07
CASC3-204ENST00000474190 PRR18Q8N4B5 295 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 LINC00311Q8N616 119 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 BEND2Q8NDZ0 799 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 BEST4Q8NFU0 473 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 OR4D10Q8NGI6 311 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 OR4A4PQ8NGN8 299 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 SETD6Q8TBK2 473 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 PIFOQ8TCI5 191 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 MRGPRFQ96AM1 343 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 YPEL2Q96QA6 119 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 JPT1Q9UK76 154 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 NUP50Q9UKX7 468 aa8.39□□□□□ -1.07
CASC3-204ENST00000474190 IGKV1D-13A0A0B4J2D9 117 aa8.38□□□□□ -1.07
CASC3-204ENST00000474190 A0A0U1RQK1 487 aa8.38□□□□□ -1.07
CASC3-204ENST00000474190 A0A1W2PPH5 198 aa8.38□□□□□ -1.07
CASC3-204ENST00000474190 NPFFO15130 113 aa8.38□□□□□ -1.07
CASC3-204ENST00000474190 SPINT2O43291 252 aa8.38□□□□□ -1.07
CASC3-204ENST00000474190 ZNF735P0CB33 412 aa8.38□□□□□ -1.07
CASC3-204ENST00000474190 IGKV1-13P0DP09 117 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms