RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 TGIF2LYQ8IUE0 185 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 DRAXINQ8NBI3 349 aaPredicted RBP12.17□□□□□ -0.46
HIF3A-206ENST00000472815 CLEC18CQ8NCF0 446 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 OR1L1Q8NH94 360 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 EDARADDQ8WWZ3 215 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 TIMD4Q96H15 378 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 TOLLIPQ9H0E2 274 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 OR2S2Q9NQN1 319 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 DCAF16Q9NXF7 216 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 COMMD9Q9P000 198 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 KAAG1Q9UBP8 84 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 JPT1Q9UK76 154 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 DBX1A6NMT0 343 aa12.16□□□□□ -0.46
HIF3A-206ENST00000472815 MPPED1O15442 326 aa12.16□□□□□ -0.46
HIF3A-206ENST00000472815 ADAM20O43506 726 aa12.16□□□□□ -0.46
HIF3A-206ENST00000472815 IFNA21P01568 189 aa12.16□□□□□ -0.46
HIF3A-206ENST00000472815 NDUFB7P17568 137 aa12.16□□□□□ -0.46
HIF3A-206ENST00000472815 SRSF1Q07955 248 aaKnown RBP eCLIP12.16□□□□□ -0.46
HIF3A-206ENST00000472815 FAM216BQ8N7L0 139 aa12.16□□□□□ -0.46
HIF3A-206ENST00000472815 ZBTB34Q8NCN2 500 aa12.16□□□□□ -0.46
HIF3A-206ENST00000472815 METTL8Q9H825 291 aaKnown RBP12.16□□□□□ -0.46
HIF3A-206ENST00000472815 UBTD1Q9HAC8 227 aa12.16□□□□□ -0.46
HIF3A-206ENST00000472815 C5orf51A6NDU8 294 aa12.15□□□□□ -0.46
HIF3A-206ENST00000472815 HSD17B6O14756 317 aa12.15□□□□□ -0.46
HIF3A-206ENST00000472815 SSTR5P35346 364 aa12.15□□□□□ -0.46
HIF3A-206ENST00000472815 H2BFSP57053 126 aa12.15□□□□□ -0.46
HIF3A-206ENST00000472815 MSMO1Q15800 293 aa12.15□□□□□ -0.46
HIF3A-206ENST00000472815 ZNF818PQ6ZRF7 136 aa12.15□□□□□ -0.46
HIF3A-206ENST00000472815 LGI3Q8N145 548 aa12.15□□□□□ -0.46
HIF3A-206ENST00000472815 BVESQ8NE79 360 aa12.15□□□□□ -0.46
HIF3A-206ENST00000472815 GNG12Q9UBI6 72 aa12.15□□□□□ -0.46
HIF3A-206ENST00000472815 KCNS2Q9ULS6 477 aa12.15□□□□□ -0.46
HIF3A-206ENST00000472815 LAMP3Q9UQV4 416 aa12.15□□□□□ -0.46
HIF3A-206ENST00000472815 DSCAML1Q8TD84 2053 aa12.15□□□□□ -0.46
HIF3A-206ENST00000472815 TENM4Q6N022 2769 aa12.15□□□□□ -0.46
HIF3A-206ENST00000472815 IGKV1D-13A0A0B4J2D9 117 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 C3orf85A0A1B0GTC6 90 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 ZNF729A6NN14 1252 aaPredicted RBP12.14□□□□□ -0.47
HIF3A-206ENST00000472815 RNF212BA8MTL3 300 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 FAM25EA8MYX2 175 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 C15orf65H3BRN8 121 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 PHF1O43189 567 aaPredicted RBP12.14□□□□□ -0.47
HIF3A-206ENST00000472815 CD8AP01732 235 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 SOD3P08294 240 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 IGKV1-13P0DP09 117 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 NKX2-5P52952 324 aaPredicted RBP12.14□□□□□ -0.47
HIF3A-206ENST00000472815 C5orf24Q7Z6I8 188 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 CORO2AQ92828 525 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 RAB1CQ92928 201 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 SPOCK3Q9BQ16 436 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 GAL3ST2Q9H3Q3 398 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 CCL28Q9NRJ3 127 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 CALYQ9NYX4 217 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 UBE2J1Q9Y385 318 aaPredicted RBP12.14□□□□□ -0.47
HIF3A-206ENST00000472815 LINC00312Q9Y6C7 94 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 KBTBD11-OT1A0A1B0GTJ5 212 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 F2RL2O00254 374 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 SIX6O95475 246 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 OR5AC1P0C628 307 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 SELLP14151 372 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 SRSF4Q08170 494 aaKnown RBP12.14□□□□□ -0.47
HIF3A-206ENST00000472815 ANKRD55Q3KP44 614 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 LY6G6FQ5SQ64 297 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 TBC1D26Q86UD7 250 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 LDLRAD3Q86YD5 345 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 ZNF645Q8N7E2 425 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 LRTM2Q8N967 370 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 UBALD1Q8TB05 177 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 RAB39BQ96DA2 213 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 TMEM246Q9BRR3 403 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 TAS2R3Q9NYW6 316 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 PIPOXQ9P0Z9 390 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 CLN8Q9UBY8 286 aa12.14□□□□□ -0.47
HIF3A-206ENST00000472815 LRRK2Q5S007 2527 aa12.13□□□□□ -0.47
HIF3A-206ENST00000472815 C13orf42A0A1B0GVH6 325 aa12.13□□□□□ -0.47
HIF3A-206ENST00000472815 SMLR1H3BR10 107 aa12.13□□□□□ -0.47
HIF3A-206ENST00000472815 GPR37O15354 613 aa12.13□□□□□ -0.47
HIF3A-206ENST00000472815 YPEL1O60688 119 aa12.13□□□□□ -0.47
HIF3A-206ENST00000472815 OR8U9P0C7N5 309 aa12.13□□□□□ -0.47
HIF3A-206ENST00000472815 C4BPBP20851 252 aa12.13□□□□□ -0.47
HIF3A-206ENST00000472815 RPL31P62899 125 aaKnown RBP12.13□□□□□ -0.47
HIF3A-206ENST00000472815 TMEM187Q14656 261 aa12.13□□□□□ -0.47
HIF3A-206ENST00000472815 C2orf68Q2NKX9 166 aa12.13□□□□□ -0.47
HIF3A-206ENST00000472815 LIAT1Q6ZQX7 453 aa12.13□□□□□ -0.47
HIF3A-206ENST00000472815 OR10A7Q8NGE5 316 aa12.13□□□□□ -0.47
HIF3A-206ENST00000472815 OR52L2PQ8NGH6 319 aa12.13□□□□□ -0.47
HIF3A-206ENST00000472815 OR8U1Q8NH10 309 aa12.13□□□□□ -0.47
HIF3A-206ENST00000472815 RFESDQ8TAC1 157 aa12.13□□□□□ -0.47
HIF3A-206ENST00000472815 YPEL2Q96QA6 119 aa12.13□□□□□ -0.47
HIF3A-206ENST00000472815 NMES1Q9C002 83 aa12.13□□□□□ -0.47
HIF3A-206ENST00000472815 LIN7CQ9NUP9 197 aaKnown RBP12.13□□□□□ -0.47
HIF3A-206ENST00000472815 H0Y980 276 aa12.12□□□□□ -0.47
HIF3A-206ENST00000472815 CCSO14618 274 aa12.12□□□□□ -0.47
HIF3A-206ENST00000472815 TNFRSF13BO14836 293 aaPredicted RBP12.12□□□□□ -0.47
HIF3A-206ENST00000472815 WNT2P09544 360 aa12.12□□□□□ -0.47
HIF3A-206ENST00000472815 DAOP14920 347 aa12.12□□□□□ -0.47
HIF3A-206ENST00000472815 COL8A2P25067 703 aa12.12□□□□□ -0.47
HIF3A-206ENST00000472815 TLE4Q04727 773 aa12.12□□□□□ -0.47
HIF3A-206ENST00000472815 DCAF12L2Q5VW00 463 aa12.12□□□□□ -0.47
HIF3A-206ENST00000472815 TMEM222Q9H0R3 208 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms