RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 GZMHP20718 246 aa1.55□□□□□ -2.16
PTCD3-209ENST00000472044 CSRP1P21291 193 aaKnown RBP1.55□□□□□ -2.16
PTCD3-209ENST00000472044 PSMA1P25786 263 aaKnown RBP1.55□□□□□ -2.16
PTCD3-209ENST00000472044 GABRA3P34903 492 aa1.55□□□□□ -2.16
PTCD3-209ENST00000472044 DLX6P56179 175 aa1.55□□□□□ -2.16
PTCD3-209ENST00000472044 TSPAN31Q12999 210 aa1.55□□□□□ -2.16
PTCD3-209ENST00000472044 ANGPT1Q15389 498 aa1.55□□□□□ -2.16
PTCD3-209ENST00000472044 CENPWQ5EE01 88 aa1.55□□□□□ -2.16
PTCD3-209ENST00000472044 TTC33Q6PID6 262 aaPredicted RBP1.55□□□□□ -2.16
PTCD3-209ENST00000472044 SELENOHQ8IZQ5 122 aaKnown RBP1.55□□□□□ -2.16
PTCD3-209ENST00000472044 YIPF7Q8N8F6 280 aa1.55□□□□□ -2.16
PTCD3-209ENST00000472044 ZNRF2Q8NHG8 242 aa1.55□□□□□ -2.16
PTCD3-209ENST00000472044 SUN5Q8TC36 379 aa1.55□□□□□ -2.16
PTCD3-209ENST00000472044 MS4A12Q9NXJ0 267 aa1.55□□□□□ -2.16
PTCD3-209ENST00000472044 SCML1Q9UN30 329 aa1.55□□□□□ -2.16
PTCD3-209ENST00000472044 WASHC3Q9Y3C0 194 aa1.55□□□□□ -2.16
PTCD3-209ENST00000472044 COL5A3P25940 1745 aaPredicted RBP1.54□□□□□ -2.16
PTCD3-209ENST00000472044 LOC102725191A0A1B0GVB3 256 aa1.54□□□□□ -2.16
PTCD3-209ENST00000472044 ERICH2A1L162 156 aa1.54□□□□□ -2.16
PTCD3-209ENST00000472044 IGSF23A1L1A6 192 aa1.54□□□□□ -2.16
PTCD3-209ENST00000472044 TMEM213A2RRL7 107 aa1.54□□□□□ -2.16
PTCD3-209ENST00000472044 F5H5T6 163 aa1.54□□□□□ -2.16
PTCD3-209ENST00000472044 CDK14O94921 469 aa1.54□□□□□ -2.16
PTCD3-209ENST00000472044 IGHV3-30-3P0DP02 117 aa1.54□□□□□ -2.16
PTCD3-209ENST00000472044 AKR1C2P52895 323 aa1.54□□□□□ -2.16
PTCD3-209ENST00000472044 GABARAPL2P60520 117 aa1.54□□□□□ -2.16
PTCD3-209ENST00000472044 DYNLL1P63167 89 aaKnown RBP1.54□□□□□ -2.16
PTCD3-209ENST00000472044 TIMM23BQ5SRD1 257 aa1.54□□□□□ -2.16
PTCD3-209ENST00000472044 ZNF767PQ75MW2 155 aa1.54□□□□□ -2.16
PTCD3-209ENST00000472044 SPATA24Q86W54 205 aa1.54□□□□□ -2.16
PTCD3-209ENST00000472044 ZNF567Q8N184 647 aa1.54□□□□□ -2.16
PTCD3-209ENST00000472044 Q8NDZ9 215 aa1.54□□□□□ -2.16
PTCD3-209ENST00000472044 OR4K13Q8NH42 304 aa1.54□□□□□ -2.16
PTCD3-209ENST00000472044 LRRC45Q96CN5 670 aa1.54□□□□□ -2.16
PTCD3-209ENST00000472044 CFAP53Q96M91 514 aa1.54□□□□□ -2.16
PTCD3-209ENST00000472044 EBNA1BP2Q99848 306 aaKnown RBP1.54□□□□□ -2.16
PTCD3-209ENST00000472044 UPK3BQ9BT76 320 aa1.54□□□□□ -2.16
PTCD3-209ENST00000472044 C1QTNF6Q9BXI9 259 aa1.54□□□□□ -2.16
PTCD3-209ENST00000472044 AICDAQ9GZX7 198 aa1.54□□□□□ -2.16
PTCD3-209ENST00000472044 GTSF1LQ9H1H1 148 aa1.54□□□□□ -2.16
PTCD3-209ENST00000472044 LRRC19Q9H756 370 aa1.54□□□□□ -2.16
PTCD3-209ENST00000472044 C1orf109Q9NX04 203 aa1.54□□□□□ -2.16
PTCD3-209ENST00000472044 PSORS1C2Q9UIG4 136 aa1.54□□□□□ -2.16
PTCD3-209ENST00000472044 ARHGAP32A7KAX9 2087 aa1.54□□□□□ -2.16
PTCD3-209ENST00000472044 ODF3BA8MYP8 253 aa1.53□□□□□ -2.16
PTCD3-209ENST00000472044 F8VZ95 297 aa1.53□□□□□ -2.16
PTCD3-209ENST00000472044 M0QYV0 167 aa1.53□□□□□ -2.16
PTCD3-209ENST00000472044 TOR1AO14656 332 aa1.53□□□□□ -2.16
PTCD3-209ENST00000472044 CRTAPO75718 401 aaPredicted RBP1.53□□□□□ -2.16
PTCD3-209ENST00000472044 MPDZO75970 2070 aa1.53□□□□□ -2.16
PTCD3-209ENST00000472044 COL4A2P08572 1712 aa1.53□□□□□ -2.16
PTCD3-209ENST00000472044 CRB1P82279 1406 aa1.53□□□□□ -2.16
PTCD3-209ENST00000472044 BSPH1Q075Z2 132 aa1.53□□□□□ -2.16
PTCD3-209ENST00000472044 TMEM94Q12767 1356 aa1.53□□□□□ -2.16
PTCD3-209ENST00000472044 PTPRJQ12913 1337 aa1.53□□□□□ -2.16
PTCD3-209ENST00000472044 PDGFRLQ15198 375 aa1.53□□□□□ -2.16
PTCD3-209ENST00000472044 MAPK14Q16539 360 aa1.53□□□□□ -2.16
PTCD3-209ENST00000472044 TRMT12Q53H54 448 aaKnown RBP1.53□□□□□ -2.16
PTCD3-209ENST00000472044 ACSBG2Q5FVE4 666 aa1.53□□□□□ -2.16
PTCD3-209ENST00000472044 Q6ZRU5 148 aa1.53□□□□□ -2.16
PTCD3-209ENST00000472044 SLC13A5Q86YT5 568 aaPredicted RBP1.53□□□□□ -2.16
PTCD3-209ENST00000472044 CRLF3Q8IUI8 442 aa1.53□□□□□ -2.16
PTCD3-209ENST00000472044 VWDEQ8N2E2 1590 aa1.53□□□□□ -2.16
PTCD3-209ENST00000472044 DNAAF3Q8N9W5 541 aa1.53□□□□□ -2.16
PTCD3-209ENST00000472044 OR4C16Q8NGL9 310 aa1.53□□□□□ -2.16
PTCD3-209ENST00000472044 OR51H1Q8NH63 302 aa1.53□□□□□ -2.16
PTCD3-209ENST00000472044 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.53□□□□□ -2.16
PTCD3-209ENST00000472044 SLC19A3Q9BZV2 496 aa1.53□□□□□ -2.16
PTCD3-209ENST00000472044 CCL26Q9Y258 94 aa1.53□□□□□ -2.16
PTCD3-209ENST00000472044 FIS1Q9Y3D6 152 aa1.53□□□□□ -2.16
PTCD3-209ENST00000472044 HEY1Q9Y5J3 304 aa1.53□□□□□ -2.16
PTCD3-209ENST00000472044 SLIT2O94813 1529 aa1.52□□□□□ -2.17
PTCD3-209ENST00000472044 GOLGA8RI6L899 631 aa1.52□□□□□ -2.17
PTCD3-209ENST00000472044 K7EQS6 105 aa1.52□□□□□ -2.17
PTCD3-209ENST00000472044 NPPAP01160 153 aa1.52□□□□□ -2.17
PTCD3-209ENST00000472044 CRYGDP07320 174 aa1.52□□□□□ -2.17
PTCD3-209ENST00000472044 OR4A8P0C604 315 aa1.52□□□□□ -2.17
PTCD3-209ENST00000472044 BLVRBP30043 206 aaPredicted RBP1.52□□□□□ -2.17
PTCD3-209ENST00000472044 PSMB3P49720 205 aa1.52□□□□□ -2.17
PTCD3-209ENST00000472044 PSMD7P51665 324 aa1.52□□□□□ -2.17
PTCD3-209ENST00000472044 FOXF1Q12946 379 aa1.52□□□□□ -2.17
PTCD3-209ENST00000472044 PMS2P3Q13401 168 aa1.52□□□□□ -2.17
PTCD3-209ENST00000472044 PDK2Q15119 407 aa1.52□□□□□ -2.17
PTCD3-209ENST00000472044 OR52E4Q8NGH9 312 aa1.52□□□□□ -2.17
PTCD3-209ENST00000472044 OR5C1Q8NGR4 320 aa1.52□□□□□ -2.17
PTCD3-209ENST00000472044 SMIM12Q96EX1 92 aa1.52□□□□□ -2.17
PTCD3-209ENST00000472044 CAPZA3Q96KX2 299 aa1.52□□□□□ -2.17
PTCD3-209ENST00000472044 ZNF251Q9BRH9 671 aa1.52□□□□□ -2.17
PTCD3-209ENST00000472044 CHMP4BQ9H444 224 aaKnown RBP1.52□□□□□ -2.17
PTCD3-209ENST00000472044 SMDT1Q9H4I9 107 aa1.52□□□□□ -2.17
PTCD3-209ENST00000472044 TMEM106BQ9NUM4 274 aa1.52□□□□□ -2.17
PTCD3-209ENST00000472044 TAS2R9Q9NYW1 312 aa1.52□□□□□ -2.17
PTCD3-209ENST00000472044 CD300AQ9UGN4 299 aa1.52□□□□□ -2.17
PTCD3-209ENST00000472044 LINC00527Q9UJ94 153 aa1.52□□□□□ -2.17
PTCD3-209ENST00000472044 MRPS16Q9Y3D3 137 aaKnown RBP1.52□□□□□ -2.17
PTCD3-209ENST00000472044 COL11A1P12107 1806 aaPredicted RBP1.52□□□□□ -2.17
PTCD3-209ENST00000472044 TRGV4A0A0C4DH28 118 aa1.51□□□□□ -2.17
PTCD3-209ENST00000472044 TOX3O15405 576 aaPredicted RBP1.51□□□□□ -2.17
PTCD3-209ENST00000472044 NQO1P15559 274 aaKnown RBP1.51□□□□□ -2.17
PTCD3-209ENST00000472044 PVALBP20472 110 aaPredicted RBP1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms