RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 NANOGP1Q8N7R0 232 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 DTX3Q8N9I9 347 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 BPIFB6Q8NFQ5 453 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 OR10A7Q8NGE5 316 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 FBLIM1Q8WUP2 373 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 CREB3L1Q96BA8 519 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 RCC1LQ96I51 464 aaKnown RBP6.31□□□□□ -1.4
USP48-207ENST00000471752 Q96M66 194 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 RDH12Q96NR8 316 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 OR5B12Q96R08 314 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 PRR25Q96S07 402 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 FAAP24Q9BTP7 215 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 ALX4Q9H161 411 aaPredicted RBP6.31□□□□□ -1.4
USP48-207ENST00000471752 ABCG5Q9H222 651 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 TAF9BQ9HBM6 251 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 FKBP14Q9NWM8 211 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 PAK1IP1Q9NWT1 392 aaPredicted RBP6.31□□□□□ -1.4
USP48-207ENST00000471752 ZNF107Q9UII5 783 aaPredicted RBP6.31□□□□□ -1.4
USP48-207ENST00000471752 FBXO7Q9Y3I1 522 aa6.31□□□□□ -1.4
USP48-207ENST00000471752 AMMECR1Q9Y4X0 333 aaPredicted RBP6.31□□□□□ -1.4
USP48-207ENST00000471752 M0QZK8 103 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 CCL24O00175 119 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 MOSP00540 346 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 MYF6P23409 242 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 CD1BP29016 333 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 MYCNOSP40205 109 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 KCNJ3P48549 501 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 NDPQ00604 133 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 UNC119Q13432 240 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 RCN1Q15293 331 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 PNLIPRP3Q17RR3 467 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 MORN2Q502X0 79 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 YIF1BQ5BJH7 314 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 C6orf141Q5SZD1 244 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 AWAT2Q6E213 333 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 GLDNQ6ZMI3 551 aaPredicted RBP6.3□□□□□ -1.4
USP48-207ENST00000471752 SLC16A12Q6ZSM3 486 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 C6orf201Q7Z4U5 140 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 TGIF2LXQ8IUE1 241 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 IZUMO1Q8IYV9 350 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 DHRSXQ8N5I4 330 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 OR52M1Q8NGK5 317 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 OR2T10Q8NGZ9 312 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 CHPT1Q8WUD6 406 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 NRG4Q8WWG1 115 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 S100A13Q99584 98 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 LYSTQ99698 3801 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 ASCL2Q99929 193 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 HDHD3Q9BSH5 251 aaPredicted RBP6.3□□□□□ -1.4
USP48-207ENST00000471752 MRPL20Q9BYC9 149 aaKnown RBP6.3□□□□□ -1.4
USP48-207ENST00000471752 GNB4Q9HAV0 340 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 TRAPPC2LQ9UL33 140 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 GAB2Q9UQC2 676 aa6.3□□□□□ -1.4
USP48-207ENST00000471752 LSM2Q9Y333 95 aaKnown RBP6.3□□□□□ -1.4
USP48-207ENST00000471752 EPPK1P58107 5090 aaKnown RBP6.3□□□□□ -1.4
USP48-207ENST00000471752 MCRIP1C9JLW8 97 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 PTGES3LE9PB15 166 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 H0YHG0 523 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 H3BUI4 141 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 EBAG9O00559 213 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 SOX15O60248 233 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 PROP1O75360 226 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 SC5DO75845 299 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 EGR2P11161 476 aaPredicted RBP6.29□□□□□ -1.4
USP48-207ENST00000471752 MYL12AP19105 171 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 FSTP19883 344 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 FUT3P21217 361 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 CAPGP40121 348 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 ARHGDIBP52566 201 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 GNB1P62873 340 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 QRFPP83859 136 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 LSAMPQ13449 338 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 GPR50Q13585 617 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 MPV17LQ2QL34 196 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 ACSM3Q53FZ2 586 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 RPL39P5Q59GN2 51 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 VAX1Q5SQQ9 334 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 OGFRL1Q5TC84 451 aaPredicted RBP6.29□□□□□ -1.4
USP48-207ENST00000471752 TTC23Q5W5X9 447 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 TMEM91Q6ZNR0 172 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 C8orf31Q8N9H6 132 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 KCTD7Q96MP8 289 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 NABP2Q9BQ15 211 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 ZNF251Q9BRH9 671 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 TMED9Q9BVK6 235 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 ANKRD60Q9BZ19 345 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 OR2S2Q9NQN1 319 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 GNG12Q9UBI6 72 aa6.29□□□□□ -1.4
USP48-207ENST00000471752 LSM4Q9Y4Z0 139 aaKnown RBP6.29□□□□□ -1.4
USP48-207ENST00000471752 IGHV7-81A0A0B4J1V7 117 aa6.28□□□□□ -1.4
USP48-207ENST00000471752 EFCAB10A6NFE3 127 aa6.28□□□□□ -1.4
USP48-207ENST00000471752 AP4M1O00189 453 aa6.28□□□□□ -1.4
USP48-207ENST00000471752 SOCS1O15524 211 aa6.28□□□□□ -1.4
USP48-207ENST00000471752 SPINT2O43291 252 aa6.28□□□□□ -1.4
USP48-207ENST00000471752 CT45A6P0DMU7 189 aa6.28□□□□□ -1.4
USP48-207ENST00000471752 CT45A5P0DMU8 189 aa6.28□□□□□ -1.4
USP48-207ENST00000471752 CT45A7P0DMV0 189 aa6.28□□□□□ -1.4
USP48-207ENST00000471752 PSMB8P28062 276 aa6.28□□□□□ -1.4
USP48-207ENST00000471752 CHATP28329 748 aa6.28□□□□□ -1.4
USP48-207ENST00000471752 BLVRBP30043 206 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms