RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 STEAP3Q658P3 488 aa11.31□□□□□ -0.6
TOP3B-215ENST00000470338 C22orf42Q6IC83 251 aa11.31□□□□□ -0.6
TOP3B-215ENST00000470338 ZNF880Q6PDB4 577 aa11.31□□□□□ -0.6
TOP3B-215ENST00000470338 Q6ZS46 218 aa11.31□□□□□ -0.6
TOP3B-215ENST00000470338 SLC25A48Q6ZT89 311 aaKnown RBP11.31□□□□□ -0.6
TOP3B-215ENST00000470338 OR8H3Q8N146 312 aa11.31□□□□□ -0.6
TOP3B-215ENST00000470338 ST6GALNAC6Q969X2 333 aa11.31□□□□□ -0.6
TOP3B-215ENST00000470338 TXNL4BQ9NX01 149 aaKnown RBP11.31□□□□□ -0.6
TOP3B-215ENST00000470338 GNG12Q9UBI6 72 aa11.31□□□□□ -0.6
TOP3B-215ENST00000470338 TMEM272A0A1B0GTI8 110 aa11.3□□□□□ -0.6
TOP3B-215ENST00000470338 IFITM5A6NNB3 132 aa11.3□□□□□ -0.6
TOP3B-215ENST00000470338 HSD17B6O14756 317 aa11.3□□□□□ -0.6
TOP3B-215ENST00000470338 GAPDHP04406 335 aaKnown RBP11.3□□□□□ -0.6
TOP3B-215ENST00000470338 FAM106CPP0CH98 169 aa11.3□□□□□ -0.6
TOP3B-215ENST00000470338 RAB3BP20337 219 aa11.3□□□□□ -0.6
TOP3B-215ENST00000470338 OR10A3P58181 314 aa11.3□□□□□ -0.6
TOP3B-215ENST00000470338 HTD2P86397 168 aa11.3□□□□□ -0.6
TOP3B-215ENST00000470338 HMGN3Q15651 99 aa11.3□□□□□ -0.6
TOP3B-215ENST00000470338 MORN2Q502X0 79 aa11.3□□□□□ -0.6
TOP3B-215ENST00000470338 CT45A1Q5HYN5 189 aa11.3□□□□□ -0.6
TOP3B-215ENST00000470338 Q6ZPA2 131 aa11.3□□□□□ -0.6
TOP3B-215ENST00000470338 C5orf24Q7Z6I8 188 aa11.3□□□□□ -0.6
TOP3B-215ENST00000470338 NR2C2APQ86WQ0 139 aa11.3□□□□□ -0.6
TOP3B-215ENST00000470338 PRR18Q8N4B5 295 aa11.3□□□□□ -0.6
TOP3B-215ENST00000470338 DRAM1Q8N682 238 aa11.3□□□□□ -0.6
TOP3B-215ENST00000470338 KLHDC1Q8N7A1 406 aa11.3□□□□□ -0.6
TOP3B-215ENST00000470338 CT45A3Q8NHU0 189 aa11.3□□□□□ -0.6
TOP3B-215ENST00000470338 AKR1E2Q96JD6 320 aa11.3□□□□□ -0.6
TOP3B-215ENST00000470338 SLC25A33Q9BSK2 321 aa11.3□□□□□ -0.6
TOP3B-215ENST00000470338 RIMS4Q9H426 269 aaPredicted RBP11.3□□□□□ -0.6
TOP3B-215ENST00000470338 OR2S2Q9NQN1 319 aa11.3□□□□□ -0.6
TOP3B-215ENST00000470338 RAB22AQ9UL26 194 aa11.3□□□□□ -0.6
TOP3B-215ENST00000470338 STUB1Q9UNE7 303 aa11.3□□□□□ -0.6
TOP3B-215ENST00000470338 TRBV6-6A0A0A6YYG2 114 aa11.29□□□□□ -0.6
TOP3B-215ENST00000470338 IGHV1-3A0A0C4DH29 117 aa11.29□□□□□ -0.6
TOP3B-215ENST00000470338 SLC31A2O15432 143 aa11.29□□□□□ -0.6
TOP3B-215ENST00000470338 AMY1AP04745 511 aa11.29□□□□□ -0.6
TOP3B-215ENST00000470338 AMY2AP04746 511 aa11.29□□□□□ -0.6
TOP3B-215ENST00000470338 SNRNP70P08621 437 aaKnown RBP11.29□□□□□ -0.6
TOP3B-215ENST00000470338 VEGFCP49767 419 aa11.29□□□□□ -0.6
TOP3B-215ENST00000470338 ZNF137PP52743 207 aa11.29□□□□□ -0.6
TOP3B-215ENST00000470338 PLA2G7Q13093 441 aa11.29□□□□□ -0.6
TOP3B-215ENST00000470338 EBI3Q14213 229 aa11.29□□□□□ -0.6
TOP3B-215ENST00000470338 HERPUD1Q15011 391 aa11.29□□□□□ -0.6
TOP3B-215ENST00000470338 LY6G6FQ5SQ64 297 aa11.29□□□□□ -0.6
TOP3B-215ENST00000470338 TREML4Q6UXN2 200 aa11.29□□□□□ -0.6
TOP3B-215ENST00000470338 Q6ZTK2 550 aa11.29□□□□□ -0.6
TOP3B-215ENST00000470338 OR56B1Q8NGI3 324 aa11.29□□□□□ -0.6
TOP3B-215ENST00000470338 OR10V1Q8NGI7 309 aa11.29□□□□□ -0.6
TOP3B-215ENST00000470338 OR56B4Q8NH76 319 aa11.29□□□□□ -0.6
TOP3B-215ENST00000470338 WIPF2Q8TF74 440 aaPredicted RBP11.29□□□□□ -0.6
TOP3B-215ENST00000470338 CAPSLQ8WWF8 208 aa11.29□□□□□ -0.6
TOP3B-215ENST00000470338 WNT10AQ9GZT5 417 aa11.29□□□□□ -0.6
TOP3B-215ENST00000470338 AK3Q9UIJ7 227 aa11.29□□□□□ -0.6
TOP3B-215ENST00000470338 JPT1Q9UK76 154 aa11.29□□□□□ -0.6
TOP3B-215ENST00000470338 M0QZ24 198 aa11.28□□□□□ -0.6
TOP3B-215ENST00000470338 YPEL1O60688 119 aa11.28□□□□□ -0.6
TOP3B-215ENST00000470338 VSIG10L2P0DP72 767 aa11.28□□□□□ -0.6
TOP3B-215ENST00000470338 IL3RAP26951 378 aa11.28□□□□□ -0.6
TOP3B-215ENST00000470338 PLAC9Q5JTB6 97 aa11.28□□□□□ -0.6
TOP3B-215ENST00000470338 TPRA1Q86W33 373 aa11.28□□□□□ -0.6
TOP3B-215ENST00000470338 OR52L2PQ8NGH6 319 aa11.28□□□□□ -0.6
TOP3B-215ENST00000470338 RTN4IP1Q8WWV3 396 aaPredicted RBP11.28□□□□□ -0.6
TOP3B-215ENST00000470338 GALMQ96C23 342 aa11.28□□□□□ -0.6
TOP3B-215ENST00000470338 ARHGAP5-AS1Q96IT6 56 aa11.28□□□□□ -0.6
TOP3B-215ENST00000470338 YPEL2Q96QA6 119 aa11.28□□□□□ -0.6
TOP3B-215ENST00000470338 PECRQ9BY49 303 aa11.28□□□□□ -0.6
TOP3B-215ENST00000470338 SSR3Q9UNL2 185 aa11.28□□□□□ -0.6
TOP3B-215ENST00000470338 M0QZK8 103 aa11.27□□□□□ -0.61
TOP3B-215ENST00000470338 RAB6AP20340 208 aa11.27□□□□□ -0.61
TOP3B-215ENST00000470338 PPP1CCP36873 323 aaKnown RBP11.27□□□□□ -0.61
TOP3B-215ENST00000470338 REG1BP48304 166 aa11.27□□□□□ -0.61
TOP3B-215ENST00000470338 GNMTQ14749 295 aa11.27□□□□□ -0.61
TOP3B-215ENST00000470338 MOB1BQ7L9L4 216 aa11.27□□□□□ -0.61
TOP3B-215ENST00000470338 MOB3BQ86TA1 216 aa11.27□□□□□ -0.61
TOP3B-215ENST00000470338 PTX4Q96A99 478 aa11.27□□□□□ -0.61
TOP3B-215ENST00000470338 OR51E2Q9H255 320 aa11.27□□□□□ -0.61
TOP3B-215ENST00000470338 CHMP1AQ9HD42 196 aaPredicted RBP11.27□□□□□ -0.61
TOP3B-215ENST00000470338 ABRACLQ9P1F3 81 aa11.27□□□□□ -0.61
TOP3B-215ENST00000470338 NOTOA8MTQ0 251 aa11.26□□□□□ -0.61
TOP3B-215ENST00000470338 TXNL1O43396 289 aa11.26□□□□□ -0.61
TOP3B-215ENST00000470338 RGS11O94810 467 aa11.26□□□□□ -0.61
TOP3B-215ENST00000470338 IGKV1D-33P01593 117 aa11.26□□□□□ -0.61
TOP3B-215ENST00000470338 IGKV1-33P01594 117 aa11.26□□□□□ -0.61
TOP3B-215ENST00000470338 TMEM11P17152 192 aa11.26□□□□□ -0.61
TOP3B-215ENST00000470338 CD1BP29016 333 aa11.26□□□□□ -0.61
TOP3B-215ENST00000470338 VDAC2P45880 294 aaPredicted RBP11.26□□□□□ -0.61
TOP3B-215ENST00000470338 NEDD8Q15843 81 aa11.26□□□□□ -0.61
TOP3B-215ENST00000470338 ABCA11PQ4W5N1 156 aa11.26□□□□□ -0.61
TOP3B-215ENST00000470338 IZUMO1Q8IYV9 350 aa11.26□□□□□ -0.61
TOP3B-215ENST00000470338 HDHD3Q9BSH5 251 aaPredicted RBP11.26□□□□□ -0.61
TOP3B-215ENST00000470338 Q9N2K0 584 aa11.26□□□□□ -0.61
TOP3B-215ENST00000470338 MGAT4AQ9UM21 535 aa11.26□□□□□ -0.61
TOP3B-215ENST00000470338 KCNK7Q9Y2U2 307 aa11.26□□□□□ -0.61
TOP3B-215ENST00000470338 MOB4Q9Y3A3 225 aa11.26□□□□□ -0.61
TOP3B-215ENST00000470338 A0A0B4J203 849 aa11.25□□□□□ -0.61
TOP3B-215ENST00000470338 RAB27BO00194 218 aa11.25□□□□□ -0.61
TOP3B-215ENST00000470338 FGF16O43320 207 aa11.25□□□□□ -0.61
TOP3B-215ENST00000470338 LANCL1O43813 399 aa11.25□□□□□ -0.61
TOP3B-215ENST00000470338 LPLP06858 475 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms