RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 HAPLN4Q86UW8 402 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 TCEAL3Q969E4 200 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 GSN-AS1Q9NRJ2 163 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 CISD1Q9NZ45 108 aaKnown RBP11.56□□□□□ -0.56
BRCA1-209ENST00000470026 CACNG5Q9UF02 275 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 RNF150Q9ULK6 438 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 WIPI2Q9Y4P8 454 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 ZNF727A8MUV8 499 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 B4DEV8 164 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 SLC33A1O00400 549 aaPredicted RBP11.56□□□□□ -0.56
BRCA1-209ENST00000470026 MT-CO3P00414 261 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 ZNF806P0C7X5 589 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 CA6P23280 308 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 GLIPR1P48060 266 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 ARL16Q0P5N6 197 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 TMEM267Q0VDI3 215 aaPredicted RBP11.56□□□□□ -0.56
BRCA1-209ENST00000470026 PMS2P11Q13670 270 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 IZUMO4Q1ZYL8 232 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 FAM90A2PQ658T7 463 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 Q8IYB0 196 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 MDS2Q8NDY4 140 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 Q8WTZ3 238 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 NIPSNAP3BQ9BS92 247 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 TMPRSS5Q9H3S3 457 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 RPRMQ9NS64 109 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 PLA2G3Q9NZ20 509 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 ESPL1Q14674 2120 aa11.55□□□□□ -0.56
BRCA1-209ENST00000470026 A0A1W2PR80 420 aa11.55□□□□□ -0.56
BRCA1-209ENST00000470026 C3orf80F5H4A9 247 aa11.55□□□□□ -0.56
BRCA1-209ENST00000470026 H3BP45 60 aa11.55□□□□□ -0.56
BRCA1-209ENST00000470026 ZNF146Q15072 292 aa11.55□□□□□ -0.56
BRCA1-209ENST00000470026 ZNF726P1Q15940 193 aa11.55□□□□□ -0.56
BRCA1-209ENST00000470026 LRRC75BQ2VPJ9 315 aa11.55□□□□□ -0.56
BRCA1-209ENST00000470026 FBXW9Q5XUX1 488 aa11.55□□□□□ -0.56
BRCA1-209ENST00000470026 NANOS1Q8WY41 292 aaKnown RBP11.55□□□□□ -0.56
BRCA1-209ENST00000470026 RTL8AQ9BWD3 113 aa11.55□□□□□ -0.56
BRCA1-209ENST00000470026 OR51M1Q9H341 326 aa11.55□□□□□ -0.56
BRCA1-209ENST00000470026 OR2H2O95918 312 aa11.54□□□□□ -0.56
BRCA1-209ENST00000470026 FABP1P07148 127 aa11.54□□□□□ -0.56
BRCA1-209ENST00000470026 SP1P08047 785 aa11.54□□□□□ -0.56
BRCA1-209ENST00000470026 CXCL1P09341 107 aa11.54□□□□□ -0.56
BRCA1-209ENST00000470026 BCL2P10415 239 aa11.54□□□□□ -0.56
BRCA1-209ENST00000470026 MEOX1P50221 254 aa11.54□□□□□ -0.56
BRCA1-209ENST00000470026 ERVFRD-1P60508 538 aa11.54□□□□□ -0.56
BRCA1-209ENST00000470026 SERF2P84101 59 aa11.54□□□□□ -0.56
BRCA1-209ENST00000470026 PLGLB1Q02325 96 aa11.54□□□□□ -0.56
BRCA1-209ENST00000470026 C3AR1Q16581 482 aa11.54□□□□□ -0.56
BRCA1-209ENST00000470026 MDP1Q86V88 176 aa11.54□□□□□ -0.56
BRCA1-209ENST00000470026 MCEMP1Q8IX19 187 aa11.54□□□□□ -0.56
BRCA1-209ENST00000470026 RSG1Q9BU20 258 aa11.54□□□□□ -0.56
BRCA1-209ENST00000470026 LIN7CQ9NUP9 197 aaKnown RBP11.54□□□□□ -0.56
BRCA1-209ENST00000470026 TMEM242Q9NWH2 141 aa11.54□□□□□ -0.56
BRCA1-209ENST00000470026 PSENENQ9NZ42 101 aa11.54□□□□□ -0.56
BRCA1-209ENST00000470026 KLF13Q9Y2Y9 288 aaPredicted RBP11.54□□□□□ -0.56
BRCA1-209ENST00000470026 FAM90A26D6RGX4 464 aa11.54□□□□□ -0.56
BRCA1-209ENST00000470026 RPS10P46783 165 aaKnown RBP11.54□□□□□ -0.56
BRCA1-209ENST00000470026 SCCPDHQ8NBX0 429 aa11.54□□□□□ -0.56
BRCA1-209ENST00000470026 SCGB1C1Q8TD33 95 aa11.54□□□□□ -0.56
BRCA1-209ENST00000470026 IL1F10Q8WWZ1 152 aa11.54□□□□□ -0.56
BRCA1-209ENST00000470026 NIT2Q9NQR4 276 aa11.54□□□□□ -0.56
BRCA1-209ENST00000470026 POLDIP2Q9Y2S7 368 aa11.54□□□□□ -0.56
BRCA1-209ENST00000470026 MMP24Q9Y5R2 645 aa11.54□□□□□ -0.56
BRCA1-209ENST00000470026 LINC00587B1AMM8 73 aa11.53□□□□□ -0.56
BRCA1-209ENST00000470026 PGA5P0DJD9 388 aa11.53□□□□□ -0.56
BRCA1-209ENST00000470026 SPINK2P20155 84 aa11.53□□□□□ -0.56
BRCA1-209ENST00000470026 RND2P52198 227 aa11.53□□□□□ -0.56
BRCA1-209ENST00000470026 PNRC1Q12796 327 aaPredicted RBP11.53□□□□□ -0.56
BRCA1-209ENST00000470026 KIAA0141Q14154 515 aaPredicted RBP11.53□□□□□ -0.56
BRCA1-209ENST00000470026 ZNF343Q6P1L6 599 aa11.53□□□□□ -0.56
BRCA1-209ENST00000470026 OR13D1Q8NGV5 346 aa11.53□□□□□ -0.56
BRCA1-209ENST00000470026 CA5BP1Q8WTZ4 195 aa11.53□□□□□ -0.56
BRCA1-209ENST00000470026 P2RX4Q99571 388 aa11.53□□□□□ -0.56
BRCA1-209ENST00000470026 VSIRQ9H7M9 311 aa11.53□□□□□ -0.56
BRCA1-209ENST00000470026 TMEM9BQ9NQ34 198 aa11.53□□□□□ -0.56
BRCA1-209ENST00000470026 OR14J1Q9UGF5 321 aa11.53□□□□□ -0.56
BRCA1-209ENST00000470026 TRIOBPQ9H2D6 2365 aa11.53□□□□□ -0.56
BRCA1-209ENST00000470026 MED12LQ86YW9 2145 aa11.53□□□□□ -0.56
BRCA1-209ENST00000470026 C1QTNF9BB2RNN3 333 aa11.53□□□□□ -0.56
BRCA1-209ENST00000470026 METTL15P1P0C7V9 234 aa11.53□□□□□ -0.56
BRCA1-209ENST00000470026 CDX1P47902 265 aaPredicted RBP11.53□□□□□ -0.56
BRCA1-209ENST00000470026 HBG1P69891 147 aa11.53□□□□□ -0.56
BRCA1-209ENST00000470026 HBG2P69892 147 aa11.53□□□□□ -0.56
BRCA1-209ENST00000470026 IGFBP7Q16270 282 aa11.53□□□□□ -0.56
BRCA1-209ENST00000470026 ZNF787Q6DD87 383 aa11.53□□□□□ -0.56
BRCA1-209ENST00000470026 LINC00696Q6ZRV3 163 aa11.53□□□□□ -0.56
BRCA1-209ENST00000470026 CENPVQ7Z7K6 275 aaPredicted RBP11.53□□□□□ -0.56
BRCA1-209ENST00000470026 DRAM1Q8N682 238 aa11.53□□□□□ -0.56
BRCA1-209ENST00000470026 RNASE11Q8TAA1 199 aaKnown RBP11.53□□□□□ -0.56
BRCA1-209ENST00000470026 WDYHV1Q96HA8 205 aa11.53□□□□□ -0.56
BRCA1-209ENST00000470026 RCC1LQ96I51 464 aaKnown RBP11.53□□□□□ -0.56
BRCA1-209ENST00000470026 WDR61Q9GZS3 305 aaKnown RBP11.53□□□□□ -0.56
BRCA1-209ENST00000470026 PPP1R3CQ9UQK1 317 aa11.53□□□□□ -0.56
BRCA1-209ENST00000470026 TRAV39A0A0B4J263 110 aa11.52□□□□□ -0.57
BRCA1-209ENST00000470026 IFITM10A6NMD0 228 aa11.52□□□□□ -0.57
BRCA1-209ENST00000470026 KLRC4-KLRK1H3BQV0 150 aa11.52□□□□□ -0.57
BRCA1-209ENST00000470026 SMPD2O60906 423 aa11.52□□□□□ -0.57
BRCA1-209ENST00000470026 P0C879 139 aa11.52□□□□□ -0.57
BRCA1-209ENST00000470026 IAPPP10997 89 aa11.52□□□□□ -0.57
BRCA1-209ENST00000470026 EIF4EBP1Q13541 118 aaPredicted RBP11.52□□□□□ -0.57
BRCA1-209ENST00000470026 SLC10A1Q14973 349 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms