RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 FOXRED2Q8IWF2 684 aa5.69□□□□□ -1.5
SNRPD3-205ENST00000468770 GAPTQ8N292 157 aa5.69□□□□□ -1.5
SNRPD3-205ENST00000468770 WFDC9Q8NEX5 89 aa5.69□□□□□ -1.5
SNRPD3-205ENST00000468770 CT45A3Q8NHU0 189 aa5.69□□□□□ -1.5
SNRPD3-205ENST00000468770 KCNG3Q8TAE7 436 aa5.69□□□□□ -1.5
SNRPD3-205ENST00000468770 NRG4Q8WWG1 115 aa5.69□□□□□ -1.5
SNRPD3-205ENST00000468770 RTN4IP1Q8WWV3 396 aaPredicted RBP5.69□□□□□ -1.5
SNRPD3-205ENST00000468770 PHYHIPQ92561 330 aa5.69□□□□□ -1.5
SNRPD3-205ENST00000468770 TMEM203Q969S6 136 aa5.69□□□□□ -1.5
SNRPD3-205ENST00000468770 ST6GALNAC6Q969X2 333 aa5.69□□□□□ -1.5
SNRPD3-205ENST00000468770 NOL4LQ96MY1 436 aaPredicted RBP5.69□□□□□ -1.5
SNRPD3-205ENST00000468770 RASL11BQ9BPW5 248 aa5.69□□□□□ -1.5
SNRPD3-205ENST00000468770 CCDC90BQ9GZT6 254 aa5.69□□□□□ -1.5
SNRPD3-205ENST00000468770 VCX3BQ9H321 246 aa5.69□□□□□ -1.5
SNRPD3-205ENST00000468770 LINC00527Q9UJ94 153 aa5.69□□□□□ -1.5
SNRPD3-205ENST00000468770 LSM2Q9Y333 95 aaKnown RBP5.69□□□□□ -1.5
SNRPD3-205ENST00000468770 LRRC42Q9Y546 428 aa5.69□□□□□ -1.5
SNRPD3-205ENST00000468770 ZNF736B4DX44 427 aaPredicted RBP5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 RGS10O43665 173 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 RGS11O94810 467 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 IGHG2P01859 326 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 IGLL1P15814 213 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 HTR2CP28335 458 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 RPS27AP62979 156 aaKnown RBP5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 SLC35A2P78381 396 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 HTD2P86397 168 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 IRF3Q14653 427 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 MORN2Q502X0 79 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 C6orf201Q7Z4U5 140 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 ZNF554Q86TJ5 538 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 IZUMO1Q8IYV9 350 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 STPG2Q8N412 459 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 COMMD1Q8N668 190 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 ZNF439Q8NDP4 499 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 OR51D1Q8NGF3 324 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 OR8H1Q8NGG4 311 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 OR52L2PQ8NGH6 319 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 MRPL30Q8TCC3 161 aaKnown RBP5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 PHF21AQ96BD5 680 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 GALMQ96C23 342 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 FAAP24Q9BTP7 215 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 TMEM59Q9BXS4 323 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 GON7Q9BXV9 100 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 ABCG5Q9H222 651 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 DUSP21Q9H596 190 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 PLGRKTQ9HBL7 147 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 CHMP1AQ9HD42 196 aaPredicted RBP5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 ZFP57Q9NU63 452 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 MBNL3Q9NUK0 354 aaKnown RBP5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 LIN7CQ9NUP9 197 aaKnown RBP5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 NECAP2Q9NVZ3 263 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 PLEKHJ1Q9NW61 149 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 ABRACLQ9P1F3 81 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 CMYA5Q8N3K9 4069 aa5.68□□□□□ -1.5
SNRPD3-205ENST00000468770 LINC01548A6NM66 108 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 NUDT19A8MXV4 375 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 AP4M1O00189 453 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 SLC22A1O15245 554 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 LANCL1O43813 399 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 YPEL1O60688 119 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 ARL6IP5O75915 188 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 DUS4LO95620 317 aaKnown RBP5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 BPNT1O95861 308 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 UCHL1P09936 223 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 ARSBP15848 533 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 MYF6P23409 242 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 PSMA1P25786 263 aaKnown RBP5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 CHATP28329 748 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 BLVRBP30043 206 aaPredicted RBP5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 PPP1CCP36873 323 aaKnown RBP5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 GPR12P47775 334 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 ZNF137PP52743 207 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 RPL23AP62750 156 aaKnown RBP5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 TPBGQ13641 420 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 GNMTQ14749 295 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 TRAM1Q15629 374 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 PNLIPRP3Q17RR3 467 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 FOXB2Q5VYV0 432 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 TEX38Q6PEX7 206 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 PRSS48Q7RTY5 328 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 C5orf24Q7Z6I8 188 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 Q8N6K4 173 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 Q8N9W7 124 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 OR2AK2Q8NG84 335 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 OR6M1Q8NGM8 313 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 SETD6Q8TBK2 473 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 MRAPQ8TCY5 172 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 IL1F10Q8WWZ1 152 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 RCC1LQ96I51 464 aaKnown RBP5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 YPEL2Q96QA6 119 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 S1PR3Q99500 378 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 SULT4A1Q9BR01 284 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 NICN1Q9BSH3 213 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 URM1Q9BTM9 101 aaKnown RBP5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 ABHD14AQ9BUJ0 271 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 TM2D1Q9BX74 207 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 ANKRD60Q9BZ19 345 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 RIMS4Q9H426 269 aaPredicted RBP5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 ISYNA1Q9NPH2 558 aa5.67□□□□□ -1.5
SNRPD3-205ENST00000468770 PLSCR3Q9NRY6 295 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms