RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 TM2D1Q9BX74 207 aa9.2□□□□□ -0.94
CDHR3-205ENST00000468143 LPAR5Q9H1C0 372 aa9.2□□□□□ -0.94
CDHR3-205ENST00000468143 OR2S2Q9NQN1 319 aa9.2□□□□□ -0.94
CDHR3-205ENST00000468143 SHISA3A0PJX4 238 aa9.19□□□□□ -0.94
CDHR3-205ENST00000468143 ZNF736B4DX44 427 aaPredicted RBP9.19□□□□□ -0.94
CDHR3-205ENST00000468143 SLC17A2O00624 439 aa9.19□□□□□ -0.94
CDHR3-205ENST00000468143 KCNAB3O43448 404 aa9.19□□□□□ -0.94
CDHR3-205ENST00000468143 DENRO43583 198 aaKnown RBP9.19□□□□□ -0.94
CDHR3-205ENST00000468143 DEFA6Q01524 100 aa9.19□□□□□ -0.94
CDHR3-205ENST00000468143 ZNF816Q0VGE8 651 aaPredicted RBP9.19□□□□□ -0.94
CDHR3-205ENST00000468143 PLA2G7Q13093 441 aa9.19□□□□□ -0.94
CDHR3-205ENST00000468143 C2orf76Q3KRA6 126 aa9.19□□□□□ -0.94
CDHR3-205ENST00000468143 MORN2Q502X0 79 aa9.19□□□□□ -0.94
CDHR3-205ENST00000468143 TRAT1Q6PIZ9 186 aa9.19□□□□□ -0.94
CDHR3-205ENST00000468143 C10orf99Q6UWK7 81 aa9.19□□□□□ -0.94
CDHR3-205ENST00000468143 SPARTQ8N0X7 666 aa9.19□□□□□ -0.94
CDHR3-205ENST00000468143 OR8H3Q8N146 312 aa9.19□□□□□ -0.94
CDHR3-205ENST00000468143 LINC00311Q8N616 119 aa9.19□□□□□ -0.94
CDHR3-205ENST00000468143 ZNF439Q8NDP4 499 aa9.19□□□□□ -0.94
CDHR3-205ENST00000468143 OR5AU1Q8NGC0 362 aa9.19□□□□□ -0.94
CDHR3-205ENST00000468143 ST6GALNAC6Q969X2 333 aa9.19□□□□□ -0.94
CDHR3-205ENST00000468143 Q9H521 79 aa9.19□□□□□ -0.94
CDHR3-205ENST00000468143 CHMP1AQ9HD42 196 aaPredicted RBP9.19□□□□□ -0.94
CDHR3-205ENST00000468143 MBNL3Q9NUK0 354 aaKnown RBP9.19□□□□□ -0.94
CDHR3-205ENST00000468143 PLEKHJ1Q9NW61 149 aa9.19□□□□□ -0.94
CDHR3-205ENST00000468143 MOB4Q9Y3A3 225 aa9.19□□□□□ -0.94
CDHR3-205ENST00000468143 V9GY05 133 aa9.19□□□□□ -0.94
CDHR3-205ENST00000468143 A0A1W2PRX2 142 aa9.18□□□□□ -0.94
CDHR3-205ENST00000468143 WIPF1O43516 503 aa9.18□□□□□ -0.94
CDHR3-205ENST00000468143 IL3RAP26951 378 aa9.18□□□□□ -0.94
CDHR3-205ENST00000468143 PPP1CCP36873 323 aaKnown RBP9.18□□□□□ -0.94
CDHR3-205ENST00000468143 VEGFCP49767 419 aa9.18□□□□□ -0.94
CDHR3-205ENST00000468143 TMEM50BP56557 158 aa9.18□□□□□ -0.94
CDHR3-205ENST00000468143 OR10A3P58181 314 aa9.18□□□□□ -0.94
CDHR3-205ENST00000468143 GABARAPL2P60520 117 aa9.18□□□□□ -0.94
CDHR3-205ENST00000468143 Q6ZPA2 131 aa9.18□□□□□ -0.94
CDHR3-205ENST00000468143 SLC25A48Q6ZT89 311 aaKnown RBP9.18□□□□□ -0.94
CDHR3-205ENST00000468143 C1QL4Q86Z23 238 aa9.18□□□□□ -0.94
CDHR3-205ENST00000468143 SVOPQ8N4V2 548 aa9.18□□□□□ -0.94
CDHR3-205ENST00000468143 C8orf31Q8N9H6 132 aa9.18□□□□□ -0.94
CDHR3-205ENST00000468143 WIPF2Q8TF74 440 aaPredicted RBP9.18□□□□□ -0.94
CDHR3-205ENST00000468143 RTN4IP1Q8WWV3 396 aaPredicted RBP9.18□□□□□ -0.94
CDHR3-205ENST00000468143 IL1F10Q8WWZ1 152 aa9.18□□□□□ -0.94
CDHR3-205ENST00000468143 FAM3DQ96BQ1 224 aa9.18□□□□□ -0.94
CDHR3-205ENST00000468143 EAF1Q96JC9 268 aaPredicted RBP9.18□□□□□ -0.94
CDHR3-205ENST00000468143 HDHD3Q9BSH5 251 aaPredicted RBP9.18□□□□□ -0.94
CDHR3-205ENST00000468143 URM1Q9BTM9 101 aaKnown RBP9.18□□□□□ -0.94
CDHR3-205ENST00000468143 RAB9BQ9NP90 201 aa9.18□□□□□ -0.94
CDHR3-205ENST00000468143 AK3Q9UIJ7 227 aa9.18□□□□□ -0.94
CDHR3-205ENST00000468143 NBEAL1Q6ZS30 2694 aa9.17□□□□□ -0.94
CDHR3-205ENST00000468143 SMIM30A4D0T7 59 aa9.17□□□□□ -0.94
CDHR3-205ENST00000468143 NCBP2LA6PVI3 153 aaKnown RBP9.17□□□□□ -0.94
CDHR3-205ENST00000468143 PSMB9P28065 219 aa9.17□□□□□ -0.94
CDHR3-205ENST00000468143 C22orf42Q6IC83 251 aa9.17□□□□□ -0.94
CDHR3-205ENST00000468143 OR2W3Q7Z3T1 314 aa9.17□□□□□ -0.94
CDHR3-205ENST00000468143 TGIF2LXQ8IUE1 241 aa9.17□□□□□ -0.94
CDHR3-205ENST00000468143 FAM89BQ8N5H3 189 aa9.17□□□□□ -0.94
CDHR3-205ENST00000468143 C5orf56Q8N8D9 126 aa9.17□□□□□ -0.94
CDHR3-205ENST00000468143 GALMQ96C23 342 aa9.17□□□□□ -0.94
CDHR3-205ENST00000468143 NDUFB11Q9NX14 153 aa9.17□□□□□ -0.94
CDHR3-205ENST00000468143 STEAP1Q9UHE8 339 aa9.17□□□□□ -0.94
CDHR3-205ENST00000468143 LINC00527Q9UJ94 153 aa9.17□□□□□ -0.94
CDHR3-205ENST00000468143 LRRC42Q9Y546 428 aa9.17□□□□□ -0.94
CDHR3-205ENST00000468143 A0A0B4J203 849 aa9.16□□□□□ -0.94
CDHR3-205ENST00000468143 TMEM272A0A1B0GTI8 110 aa9.16□□□□□ -0.94
CDHR3-205ENST00000468143 TRDV1A0A1B0GX56 115 aa9.16□□□□□ -0.94
CDHR3-205ENST00000468143 LINC01548A6NM66 108 aa9.16□□□□□ -0.94
CDHR3-205ENST00000468143 FOXI3A8MTJ6 420 aaPredicted RBP9.16□□□□□ -0.94
CDHR3-205ENST00000468143 ADARB2-AS1A8MUL3 147 aa9.16□□□□□ -0.94
CDHR3-205ENST00000468143 M0QZK8 103 aa9.16□□□□□ -0.94
CDHR3-205ENST00000468143 PDCD5O14737 125 aa9.16□□□□□ -0.94
CDHR3-205ENST00000468143 MRPS14O60783 128 aaKnown RBP9.16□□□□□ -0.94
CDHR3-205ENST00000468143 NAPSAO96009 420 aa9.16□□□□□ -0.94
CDHR3-205ENST00000468143 MYL9P24844 172 aa9.16□□□□□ -0.94
CDHR3-205ENST00000468143 PSMD7P51665 324 aa9.16□□□□□ -0.94
CDHR3-205ENST00000468143 HTD2P86397 168 aa9.16□□□□□ -0.94
CDHR3-205ENST00000468143 EBI3Q14213 229 aa9.16□□□□□ -0.94
CDHR3-205ENST00000468143 HMGN3Q15651 99 aa9.16□□□□□ -0.94
CDHR3-205ENST00000468143 TMEM30BQ3MIR4 351 aa9.16□□□□□ -0.94
CDHR3-205ENST00000468143 Q3ZCU0 254 aa9.16□□□□□ -0.94
CDHR3-205ENST00000468143 TCTEX1D4Q5JR98 221 aa9.16□□□□□ -0.94
CDHR3-205ENST00000468143 UBE2UQ5VVX9 321 aa9.16□□□□□ -0.94
CDHR3-205ENST00000468143 CD200R1LQ6Q8B3 271 aa9.16□□□□□ -0.94
CDHR3-205ENST00000468143 NDUFA11Q86Y39 141 aa9.16□□□□□ -0.94
CDHR3-205ENST00000468143 OR2T10Q8NGZ9 312 aa9.16□□□□□ -0.94
CDHR3-205ENST00000468143 R3HDM4Q96D70 268 aa9.16□□□□□ -0.94
CDHR3-205ENST00000468143 ARHGAP5-AS1Q96IT6 56 aa9.16□□□□□ -0.94
CDHR3-205ENST00000468143 NOL4LQ96MY1 436 aaPredicted RBP9.16□□□□□ -0.94
CDHR3-205ENST00000468143 PECRQ9BY49 303 aa9.16□□□□□ -0.94
CDHR3-205ENST00000468143 ABRACLQ9P1F3 81 aa9.16□□□□□ -0.94
CDHR3-205ENST00000468143 JPT1Q9UK76 154 aa9.16□□□□□ -0.94
CDHR3-205ENST00000468143 RRP15Q9Y3B9 282 aaKnown RBP9.16□□□□□ -0.94
CDHR3-205ENST00000468143 TRAV1-2A0A0B4J238 106 aa9.15□□□□□ -0.94
CDHR3-205ENST00000468143 TCRBV4S1A1TA0A5B7 111 aa9.15□□□□□ -0.94
CDHR3-205ENST00000468143 LDLRAD4O15165 306 aa9.15□□□□□ -0.94
CDHR3-205ENST00000468143 YPEL1O60688 119 aa9.15□□□□□ -0.94
CDHR3-205ENST00000468143 SLC2A2P11168 524 aaPredicted RBP9.15□□□□□ -0.94
CDHR3-205ENST00000468143 RAB3BP20337 219 aa9.15□□□□□ -0.94
CDHR3-205ENST00000468143 CD1BP29016 333 aa9.15□□□□□ -0.94
CDHR3-205ENST00000468143 OR3A3P47888 321 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms