RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 MTCP1P56278 107 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 OR12D2P58182 307 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 ABCE1P61221 599 aaKnown RBP4.25□□□□□ -1.73
PTCD3-207ENST00000467273 DLK1P80370 383 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 PITPNAQ00169 270 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 DYNC1I2Q13409 638 aaKnown RBP4.25□□□□□ -1.73
PTCD3-207ENST00000467273 DUSP7Q16829 419 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 RSPO1Q2MKA7 263 aaPredicted RBP4.25□□□□□ -1.73
PTCD3-207ENST00000467273 AGKQ53H12 422 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 MINOS1Q5TGZ0 78 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 MORN5Q5VZ52 161 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 AWAT2Q6E213 333 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 KCNIP4Q6PIL6 250 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 DUX4L9Q6RFH8 374 aaPredicted RBP4.25□□□□□ -1.73
PTCD3-207ENST00000467273 CD164L2Q6UWJ8 174 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 BTNL8Q6UX41 500 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 SIGLEC15Q6ZMC9 328 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 ZNF826PQ6ZT77 177 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 SHFQ7M4L6 423 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 DPY19L4Q7Z388 723 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 OR2W3Q7Z3T1 314 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 TSEN54Q7Z6J9 526 aaKnown RBP4.25□□□□□ -1.73
PTCD3-207ENST00000467273 TGIF2LXQ8IUE1 241 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 MKXQ8IYA7 352 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 FGFRL1Q8N441 504 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 OR11H6Q8NGC7 330 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 OR9G4Q8NGQ1 327 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 OR1L4Q8NGR5 311 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 OR8S1Q8NH09 359 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 GATAD1Q8WUU5 269 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 TMEM239Q8WW34 195 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 PINX1Q96BK5 328 aaKnown RBP4.25□□□□□ -1.73
PTCD3-207ENST00000467273 URB1-AS1Q96HZ7 61 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 PPP1R3EQ9H7J1 279 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 RAB9BQ9NP90 201 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 KRCC1Q9NPI7 259 aaPredicted RBP4.25□□□□□ -1.73
PTCD3-207ENST00000467273 SDR39U1Q9NRG7 319 aaPredicted RBP4.25□□□□□ -1.73
PTCD3-207ENST00000467273 GPR173Q9NS66 373 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 INTS9Q9NV88 658 aaKnown RBP4.25□□□□□ -1.73
PTCD3-207ENST00000467273 ARMC1Q9NVT9 282 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 CMTM6Q9NX76 183 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 USE1Q9NZ43 259 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 DUX4Q9UBX2 424 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 MED31Q9Y3C7 131 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 MINOS1-NBL1R4GNA1 71 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 HUWE1Q7Z6Z7 4374 aaKnown RBP4.24□□□□□ -1.73
PTCD3-207ENST00000467273 PSMB11A5LHX3 300 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 GGT3PA6NGU5 568 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 EVPLLA8MZ36 301 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 SEC14L6B5MCN3 397 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 CCL24O00175 119 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 ITM2AO43736 263 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 KHDRBS3O75525 346 aaKnown RBP4.24□□□□□ -1.73
PTCD3-207ENST00000467273 FADS2O95864 444 aaKnown RBP4.24□□□□□ -1.73
PTCD3-207ENST00000467273 FRMD6-AS1P0C7T7 363 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 PAX6P26367 422 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 NPBWR2P48146 333 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 RAB13P51153 203 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 POLR2JP52435 117 aaKnown RBP4.24□□□□□ -1.73
PTCD3-207ENST00000467273 ZP1P60852 638 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 IL18R1Q13478 541 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 HNF4GQ14541 408 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 DGUOKQ16854 277 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 WHAMMP3Q1A5X7 153 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 TEX30Q5JUR7 227 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 HES5Q5TA89 166 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 ZNF770Q6IQ21 691 aaPredicted RBP4.24□□□□□ -1.73
PTCD3-207ENST00000467273 ZNF546Q86UE3 836 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 ZNF695Q8IW36 515 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 C11orf53Q8IXP5 236 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 LINC00518Q8N0U6 118 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 DYNAPQ8N1N2 210 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 FTMTQ8N4E7 242 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 LRRC75AQ8NAA5 344 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 OR1M1Q8NGA1 313 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 OR13D1Q8NGV5 346 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 OR8U1Q8NH10 309 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 OR52N1Q8NH53 320 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 PFN4Q8NHR9 129 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 TMEM255BQ8WV15 326 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 RPL3LQ92901 407 aaKnown RBP4.24□□□□□ -1.73
PTCD3-207ENST00000467273 SPTSSAQ969W0 71 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 BPIFA2Q96DR5 249 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 GAFA1Q96PS6 74 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 ATF6BQ99941 703 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 PRRT1Q99946 306 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 DCLRE1BQ9H816 532 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 ABCB9Q9NP78 766 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 POLR1DQ9Y2S0 133 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 LHFPL6Q9Y693 200 aa4.24□□□□□ -1.73
PTCD3-207ENST00000467273 IGLV5-39A0A0G2JS06 123 aa4.23□□□□□ -1.73
PTCD3-207ENST00000467273 RNF222A6NCQ9 220 aa4.23□□□□□ -1.73
PTCD3-207ENST00000467273 OR2AT4A6NND4 320 aa4.23□□□□□ -1.73
PTCD3-207ENST00000467273 F5H5K5 113 aa4.23□□□□□ -1.73
PTCD3-207ENST00000467273 H3BN98 237 aa4.23□□□□□ -1.73
PTCD3-207ENST00000467273 M0R135 149 aa4.23□□□□□ -1.73
PTCD3-207ENST00000467273 CCSO14618 274 aa4.23□□□□□ -1.73
PTCD3-207ENST00000467273 HSPA12AO43301 675 aa4.23□□□□□ -1.73
PTCD3-207ENST00000467273 XRCC2O43543 280 aa4.23□□□□□ -1.73
PTCD3-207ENST00000467273 SLC16A7O60669 478 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms